A novel avian influenza A(H7N9) virus recently emerged in the Yangtze River delta and caused diseases, often severe, in over 130 people. This H7N9 virus appeared to infect humans with greater ease than previous avian ...A novel avian influenza A(H7N9) virus recently emerged in the Yangtze River delta and caused diseases, often severe, in over 130 people. This H7N9 virus appeared to infect humans with greater ease than previous avian influenza virus subtypes such as H5N1 and H9N2. While there are other potential explanations for this large number of human infections with an avian influenza virus, we investigated whether a lack of conserved T-cell epitopes between endemic H1N1 and H3N2 influenza viruses and the novel H7N9 virus contributes to this observation. Here we demonstrate that a number of T cell epitopes are conserved between endemic H1N1 and H3N2 viruses and H7N9 virus. Most of these conserved epitopes are from viral internal proteins. The extent of conservation between endemic human seasonal influenza and avian influenza H7N9 was comparable to that with the highly pathogenic avian influenza H5N1. Thus, the ease of inter-species transmission of H7N9 viruses(compared with avian H5N1 viruses) cannot be attributed to the lack of conservation of such T cell epitopes. On the contrary, our findings predict significant T-cell based cross-reactions in the human population to the novel H7N9 virus. Our findings also have implications for H7N9 virus vaccine design.展开更多
In this paper,a reaction-diffusion system is proposed to investigate avian-human influenza.Two free boundaries are introduced to describe the spreading frontiers of the avian influenza.The basic reproduction numbers r...In this paper,a reaction-diffusion system is proposed to investigate avian-human influenza.Two free boundaries are introduced to describe the spreading frontiers of the avian influenza.The basic reproduction numbers rF0(t)and RF0(t)are defined for the bird with the avian influenza and for the human with the mutant avian influenza of the free boundary problem,respectively.Properties of these two time-dependent basic reproduction numbers are obtained.Sufficient conditions both for spreading and for vanishing of the avian influenza are given.It is shown that if rF0(0)<1 and the initial number of the infected birds is small,the avian influenza vanishes in the bird world.Furthermore,if rF0(0)<1 and RF0(0)<1,the avian influenza vanishes in the bird and human worlds.In the case that rF0(0)<1 and RF0(0)>1,spreading of the mutant avian influenza in the human world is possible.It is also shown that if rF0(t0)>1 for any t0>0,the avian influenza spreads in the bird world.展开更多
A novel H7N9 influenza A virus has been discovered as the causative identity of the emerging acute respiratory infection cases in Shanghai,China.This virus has also been identified in cases of infection in the neighbo...A novel H7N9 influenza A virus has been discovered as the causative identity of the emerging acute respiratory infection cases in Shanghai,China.This virus has also been identified in cases of infection in the neighboring area Hangzhou City in Zhejiang Province.In this study,epidemiologic,clinical,and virological data from three patients in Hangzhou who were confirmed to be infected by the novel H7N9 influenza A virus were collected and analyzed.Human respiratory specimens and chicken feces from a contacted free market were tested for influenza virus by real-time reverse transcription PCR(RT-PCR) and sequencing.The clinical features of the three cases were similar featured with high fever and severe respiratory symptoms;however,only one of the patients died.A certain degree of diversity was observed among the three Hangzhou viruses sequenced from human samples compared with other reported H7N9 influenza A viruses.The sequences of the novel avian-origin H7N9 influenza viruses from Hangzhou City contained important amino acid substitutions related to human adaptation.One of the Hangzhou viruses had gained a novel amino acid substitution(Q226I) in the receptor binding region of hemagglutinin.More importantly,the virus sequenced from the chicken feces had a 627E substitution in the PB2 protein instead of the mammalian-adapted 627K substitution that was found in the PB2 proteins from the Hangzhou viruses from the three patients.Therefore,the newly-emerging H7N9 virus might be under adaptation pressure that will help it "jump" from avian to human hosts.The significance of these substitutions needs further exploration,with both laboratory experiments and extensive field surveillance.展开更多
In this paper, analytical result of avian-human influenza epidemic model has been inves- tigated by applying homotopy analysis method (HAM) and by expanding it to hybrid numeric-analytic method which is known as mul...In this paper, analytical result of avian-human influenza epidemic model has been inves- tigated by applying homotopy analysis method (HAM) and by expanding it to hybrid numeric-analytic method which is known as multistage HAM (MSHAM). HAM is an algorithm which gives us the approximate solution of the problem in an arrangement of time interims and by modifying it to multistage one. Some advantages such as flexibility of picking the auxiliary linear operator and the auxiliary parameter are emerged, that leads us to achieve some excellent results in this work. Furthermore, in this analyti- cal work, obtained results are compared and reported with numerical ones which were obtained previously from methods such as the Runge-Kutta (RK4) method.展开更多
基金supported in part by General Research Fund, Research Grants Council of Hong Kong (HKU 780113M)Area of Excellence program (AoE/M-12/06)+1 种基金University Grants Committee of Hong Kong SARResearch Fund for the Control of Infectious Diseases, Hong Kong SAR government (11100742)
文摘A novel avian influenza A(H7N9) virus recently emerged in the Yangtze River delta and caused diseases, often severe, in over 130 people. This H7N9 virus appeared to infect humans with greater ease than previous avian influenza virus subtypes such as H5N1 and H9N2. While there are other potential explanations for this large number of human infections with an avian influenza virus, we investigated whether a lack of conserved T-cell epitopes between endemic H1N1 and H3N2 influenza viruses and the novel H7N9 virus contributes to this observation. Here we demonstrate that a number of T cell epitopes are conserved between endemic H1N1 and H3N2 viruses and H7N9 virus. Most of these conserved epitopes are from viral internal proteins. The extent of conservation between endemic human seasonal influenza and avian influenza H7N9 was comparable to that with the highly pathogenic avian influenza H5N1. Thus, the ease of inter-species transmission of H7N9 viruses(compared with avian H5N1 viruses) cannot be attributed to the lack of conservation of such T cell epitopes. On the contrary, our findings predict significant T-cell based cross-reactions in the human population to the novel H7N9 virus. Our findings also have implications for H7N9 virus vaccine design.
基金supported by National Natural Science Foundation of China(Grant No.11071209)Basic Science Research Program through the National Research Foundation of Korea funded by the Ministry of Education,Science and Technology(Grant No.2010-0025700)Natural Science Foundation of the Higher Education Institutions of Jiangsu Province(Grant No.12KJD110008)
文摘In this paper,a reaction-diffusion system is proposed to investigate avian-human influenza.Two free boundaries are introduced to describe the spreading frontiers of the avian influenza.The basic reproduction numbers rF0(t)and RF0(t)are defined for the bird with the avian influenza and for the human with the mutant avian influenza of the free boundary problem,respectively.Properties of these two time-dependent basic reproduction numbers are obtained.Sufficient conditions both for spreading and for vanishing of the avian influenza are given.It is shown that if rF0(0)<1 and the initial number of the infected birds is small,the avian influenza vanishes in the bird world.Furthermore,if rF0(0)<1 and RF0(0)<1,the avian influenza vanishes in the bird and human worlds.In the case that rF0(0)<1 and RF0(0)>1,spreading of the mutant avian influenza in the human world is possible.It is also shown that if rF0(t0)>1 for any t0>0,the avian influenza spreads in the bird world.
基金supported by the Hangzhou Key Medicine Discipline Fund for Public Health Laboratory sponsored by the Hangzhou government,National Basic Research Program of China (2010CB530303,2011-CB504703)an intramural special grant for influenza virus research from Chinese Academy of Sciences (KSZD-EW-Z-002)
文摘A novel H7N9 influenza A virus has been discovered as the causative identity of the emerging acute respiratory infection cases in Shanghai,China.This virus has also been identified in cases of infection in the neighboring area Hangzhou City in Zhejiang Province.In this study,epidemiologic,clinical,and virological data from three patients in Hangzhou who were confirmed to be infected by the novel H7N9 influenza A virus were collected and analyzed.Human respiratory specimens and chicken feces from a contacted free market were tested for influenza virus by real-time reverse transcription PCR(RT-PCR) and sequencing.The clinical features of the three cases were similar featured with high fever and severe respiratory symptoms;however,only one of the patients died.A certain degree of diversity was observed among the three Hangzhou viruses sequenced from human samples compared with other reported H7N9 influenza A viruses.The sequences of the novel avian-origin H7N9 influenza viruses from Hangzhou City contained important amino acid substitutions related to human adaptation.One of the Hangzhou viruses had gained a novel amino acid substitution(Q226I) in the receptor binding region of hemagglutinin.More importantly,the virus sequenced from the chicken feces had a 627E substitution in the PB2 protein instead of the mammalian-adapted 627K substitution that was found in the PB2 proteins from the Hangzhou viruses from the three patients.Therefore,the newly-emerging H7N9 virus might be under adaptation pressure that will help it "jump" from avian to human hosts.The significance of these substitutions needs further exploration,with both laboratory experiments and extensive field surveillance.
文摘In this paper, analytical result of avian-human influenza epidemic model has been inves- tigated by applying homotopy analysis method (HAM) and by expanding it to hybrid numeric-analytic method which is known as multistage HAM (MSHAM). HAM is an algorithm which gives us the approximate solution of the problem in an arrangement of time interims and by modifying it to multistage one. Some advantages such as flexibility of picking the auxiliary linear operator and the auxiliary parameter are emerged, that leads us to achieve some excellent results in this work. Furthermore, in this analyti- cal work, obtained results are compared and reported with numerical ones which were obtained previously from methods such as the Runge-Kutta (RK4) method.