On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and shor...On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and short range correlation in human Y chromosome palindromes. The magnitude distribution of the long range correlation which can be reflected by the mutual information is PS〉PSa〉PSb （P5a and P5b are the sequences that replace solely Alu repeats and all interspersed repeats with random uneorrelated sequences in human Y chromosome palindrome 5, respectively）; and the magnitude distribution of the short range correlation which can be reflected by the n-tuple entropy and the conditional entropy is PS〉P5a〉PSb〉random uncorrelated sequence. In other words, when the Alu repeats and all interspersed repeats replace with random uneorrelated sequence, the long range and short range correlation decrease gradually. However, the random nncorrelated sequence has no correlation. This research indicates that more repeat sequences result in stronger correlation between bases in human Y chromosome. The analyses may be helpful to understand the special structures of human Y chromosome palindromes profoundly.展开更多
Validating simulation model is one of the important aspects for modeling and simulation. Some methods of validating model are compared and analyzed. Several typical methods, such as TIC’s inequality coefficient, gray...Validating simulation model is one of the important aspects for modeling and simulation. Some methods of validating model are compared and analyzed. Several typical methods, such as TIC’s inequality coefficient, gray interconnected analysis, direct spectrum estimation, maximum entropy spectral estimation based on Burg or Marple, are chosen and programmed in C language. Some examples by using the program are given. The results show that the program is available and it is best to adopt multi methods for validating models.展开更多
By comparing three sequential extraction pro- cedures, a new optimized extraction scheme for the molyb- denum association in environmental samples was proposed. Five operational steps were described as exchangeable （...By comparing three sequential extraction pro- cedures, a new optimized extraction scheme for the molyb- denum association in environmental samples was proposed. Five operational steps were described as exchangeable （KH2PO4 ＋ K2HPO4： including water-soluble）, associated with organic matter （NaOH）, Fe-Mn oxides and/or carbonates （HC1）, sulfides （H2O2） and residue （HNO3 ＋ HF ＋ H2O2）. An optimized extraction scheme was com- pared with Tessier＇s procedure and the Commission of European Communities Bureau of Reference （BCR） was applied to black shales. Results showed Tessier＇s procedure gave the lowest concentration values for exchangeable molybdenum and the highest values for the residual molybdenum, which could not present the efficiency of the extraction reagents. BCR＇s procedure showed the highest values in oxidizable molybdenum and presented four fractions of molybdenum, which did not demonstrate the fractions of molybdenum in the black shales in detail. The optimized extraction scheme demonstrated a certain improvement on extraction efficiency over Tessier＇s proce- dure for the lowest residual molybdenum, and revealed morefeatured fraction information of molybdenum in black shales than BCR＇ s. Therefore, after a comparison with other two extraction procedures, the optimized extraction scheme proved suitable for the molybdenum in black shales and it also showed an accurate determination of the molybdenum in the fractions and source of bioavailable Mo.展开更多
A recently developed computerized method for assessing the rock joint coefficients is discussed. The performances of formerly introduced relative similarity indicators, along with the correlation coefficient, are subj...A recently developed computerized method for assessing the rock joint coefficients is discussed. The performances of formerly introduced relative similarity indicators, along with the correlation coefficient, are subjected to critical analysis. These relative numerical indicators are replaced by two absolute indicators whose properties better describe surface textures of rock joints. The first absolute indicator results from the Fourier Matrix and evaluates wavy shapes of surfaces. The second absolute indicator quantifies the heights of surface reliefs, and is defined as the root mean square height of the surface outline. The behavior of the newly introduced numerical indicators are investigated by means of the deterministic periodic surface reliefs. The practical application of the new indicators is presented and the convenient performances of both the indicators are documented.展开更多
基金This work was supported by the National Natu- ral Science Foundation of China （No.20173023 and No.90203012） and the Specialized Research Fund for the Doctoral Program of Higher Education of China （No.20020730006）.
文摘On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and short range correlation in human Y chromosome palindromes. The magnitude distribution of the long range correlation which can be reflected by the mutual information is PS〉PSa〉PSb （P5a and P5b are the sequences that replace solely Alu repeats and all interspersed repeats with random uneorrelated sequences in human Y chromosome palindrome 5, respectively）; and the magnitude distribution of the short range correlation which can be reflected by the n-tuple entropy and the conditional entropy is PS〉P5a〉PSb〉random uncorrelated sequence. In other words, when the Alu repeats and all interspersed repeats replace with random uneorrelated sequence, the long range and short range correlation decrease gradually. However, the random nncorrelated sequence has no correlation. This research indicates that more repeat sequences result in stronger correlation between bases in human Y chromosome. The analyses may be helpful to understand the special structures of human Y chromosome palindromes profoundly.
文摘Validating simulation model is one of the important aspects for modeling and simulation. Some methods of validating model are compared and analyzed. Several typical methods, such as TIC’s inequality coefficient, gray interconnected analysis, direct spectrum estimation, maximum entropy spectral estimation based on Burg or Marple, are chosen and programmed in C language. Some examples by using the program are given. The results show that the program is available and it is best to adopt multi methods for validating models.
基金financially supported by the National Key Basic Research Program of China (2014CB238903)the Natural Science Foundation of China (41073017,41273029)the Opening Fund of State Key Laboratory of Environmental Geochemistry
文摘By comparing three sequential extraction pro- cedures, a new optimized extraction scheme for the molyb- denum association in environmental samples was proposed. Five operational steps were described as exchangeable （KH2PO4 ＋ K2HPO4： including water-soluble）, associated with organic matter （NaOH）, Fe-Mn oxides and/or carbonates （HC1）, sulfides （H2O2） and residue （HNO3 ＋ HF ＋ H2O2）. An optimized extraction scheme was com- pared with Tessier＇s procedure and the Commission of European Communities Bureau of Reference （BCR） was applied to black shales. Results showed Tessier＇s procedure gave the lowest concentration values for exchangeable molybdenum and the highest values for the residual molybdenum, which could not present the efficiency of the extraction reagents. BCR＇s procedure showed the highest values in oxidizable molybdenum and presented four fractions of molybdenum, which did not demonstrate the fractions of molybdenum in the black shales in detail. The optimized extraction scheme demonstrated a certain improvement on extraction efficiency over Tessier＇s proce- dure for the lowest residual molybdenum, and revealed morefeatured fraction information of molybdenum in black shales than BCR＇ s. Therefore, after a comparison with other two extraction procedures, the optimized extraction scheme proved suitable for the molybdenum in black shales and it also showed an accurate determination of the molybdenum in the fractions and source of bioavailable Mo.
基金supported by the Grant Agency of the Czech Republic (No. 13-03403S)
文摘A recently developed computerized method for assessing the rock joint coefficients is discussed. The performances of formerly introduced relative similarity indicators, along with the correlation coefficient, are subjected to critical analysis. These relative numerical indicators are replaced by two absolute indicators whose properties better describe surface textures of rock joints. The first absolute indicator results from the Fourier Matrix and evaluates wavy shapes of surfaces. The second absolute indicator quantifies the heights of surface reliefs, and is defined as the root mean square height of the surface outline. The behavior of the newly introduced numerical indicators are investigated by means of the deterministic periodic surface reliefs. The practical application of the new indicators is presented and the convenient performances of both the indicators are documented.
