Photoconversion of Lysotracker Red to a green fluorescent molecule

Dear Editor： Lysotracker Red DND-99 （Invitrogen-Molecular Probes） is a fluorophore in the form of a conjugated multi-pyrrole ring structure containing a weakly basic amine that selectively accumulates in acidic compartments and exhibits red fluorescence （excitation： 577 nm, emission： 590 nm） （Figure 1A）. It is structurally related to Lysotracker Green （Figure 1B） but has an additional pyrrole ring in conjugation with the primary structure, which produces a longer wavelength emission. Lysotracker Red is commonly used in multicolor imaging studies as a lysosomal marker to determine intracellular localization of a protein of interest by fluorescence and confocal microscopy [1-5] and is recommended by the manufacturer for this application. While using Lysotracker Red to study the localization of a protein fused to green fluorescent protein （GFP）, we observed an additional strong green fluorescent signal that colocalized with Lysotracker Red. After careful examination, however, we noted that the added green signal appeared only after illumination of the cells by a standard 100W mercury epi-fluorescence light source equipped with a 560/40 excitation filter （Leica TX2）. Prior to exposing the field to broadband excitation light, it was possible to visualize by confocal scanning （488nm excitation line） cells that exclusively expressed GFP. Remarkably, after exposure to broadband excitation light, green fluorescence appeared in all cells irrespective of GFP expression, displayed signal intensity similar to that of GFP, and colocalized with Lysotracker Red （Figure S1）.

Fluorescent Proteins as a Visible Molecular Signal for Rapid Quantification of Bioprocesses： Potential and Challenges

Green fluorescent protein (GFP) and its variants /homolog proteins are generally called as GFP-like fluorescent proteins (FPs), which are widely used as visible molecular tools for monitoring a wide range of biological processes due to their capability of simple, accurate and real time quantification. The FPs-based molecular and visible quantification tools are giving more impact on bioprocess engineering, enabling the biomolecule-level dynamic information to be linked with the process-level events. In this review, different applications of FPs in biological engineering with emphasis on rapid molecular bioprocess quantification, such as quantification of the transcription efficiency, the protein production, the protein folding efficiency, the cell concentration, the intracellular microenvironments and so on, would be first introduced. The challenges of using FPs with respect to actual bioprocess applications for the precise quantification including the interaction of FPs and the fused partner proteins, the maturation of FPs, the inner filter effect and sensing technology were then discussed. Finally, the future development for the FPs used in molecular bioprocess quantification would be proposed.