AIM:To determine the anti-Helicobacter property of Lactobacillus plantarum B7(L.plantarum)B7 supernatants in vitro and the protective effects of L.plantarum B7 on serum tumor necrosis factor-alpha(TNF-?),gastric malon...AIM:To determine the anti-Helicobacter property of Lactobacillus plantarum B7(L.plantarum)B7 supernatants in vitro and the protective effects of L.plantarum B7 on serum tumor necrosis factor-alpha(TNF-?),gastric malondialdehyde(MDA)level,apoptosis,and histopathology in Helicobacter pylori(H.pylori)-induced gastric inflammation in rats. METHODS:In vitro,the inhibition of H.pylori growth was examined using L.plantarum B7 supernatants at pH 4 and pH 7 and at the concentration of 1×,5×and 10×on plates inoculated with H.pylori.The inhibitory effect of H.pylori was interpreted by the size of the inhibition zone.In vitro,male Sprague-Dawley rats were randomly divided into four groups including group 1(control group),group 2(H.pylori infected group), group 3(H.pylori infected with L.plantarum B7 106 CFUs/mL treated group)and group 4(H.pylori infected with L.plantarum B7 1010 CFUs/mL treated group).One week after H.pylori inoculation,L.plantarum B7 106 CFUs/mL or 10 10 CFUs/mL were fed once daily to group 3 and group 4,respectively,for one week.Blood and gastric samples were collected at the end of the study. RESULTS:In vitro,at intact pH 4,mean inhibitory zone diameters of 8.5 mm and 13 mm were noted at concentrations of 5×and 10×of L.plantarum B7 supernatant disks,respectively.At adjusted pH 7, L.plantarum B7 supernatants at concentrations of 5 ×and 10×yielded mean inhibitory zone diameters of 6.5 mm and 11 mm,respectively.In the in vitro study, in group 2,stomach histopathology revealed mild to moderate H.pylori colonization and inflammation.The level of gastric MDA and epithelial cell apoptosis were significantly increased compared with group 1.The serum TNF-??level was significant decreased in group 3 compared with group 2(P<0.05).In addition,L.plantarum B7 treatments resulted in a significant improvement in stomach pathology,and decreased gastric MDA level and apoptotic epithelial cells. CONCLUSION:L.plantarum B7 supernatant inhibits H.pylori growth.This inhibition was dose-dependent and greater at pH 4.Moreover,L.plantarum B7 attenuated H.pylori-induced gastric inflammation.展开更多
Alpinia galanga, Eurycoma longifolia Jack and Syzygium aromaticum have been widely used in traditional medicine for decades. Antimicrobial activities for individual crude extract were well established. Crude methanoli...Alpinia galanga, Eurycoma longifolia Jack and Syzygium aromaticum have been widely used in traditional medicine for decades. Antimicrobial activities for individual crude extract were well established. Crude methanolic extracts of Alpinia galanga, Eurycoma longifolia Jack and Syzygium aromaticum and the combination for all extracts were tested using well diffusion techniques against Saccharomyces cerevisiae (ATCC 9763) and Escherichia coli (ATCC 25922). The mixed extracts were prepared based on the concentration ratio of 50 μg/μL which are 1:1, 1:1:1 and 1:2:2. Single Syzygium aromaticum extract showed higher inhibition zone on Saccharomyces cerevisiae compared to Escherichia coli. There is reduction in diameter of inhibition zone for single extract and mixture extracts either in combination of two or three extracts tested on Saccharomyces cerevisiae and Escherichia coli growth but they are not significant. In conclusion, Syzygium aromaticum showed highest activity against Saccharomyces cerevisiae and Escherichia coli. Reduction in diameter of inhibition zone indicated that Alpinia galanga and Eurycoma longifolia Jack extracts had antagonistic effect with Syzygium aromaticum.展开更多
Endosymbionts influence many aspects of their hosts’ health conditions, including physiology, development, immunity, metabolism, etc. Tree shrews(Tupaia belangeri chinensis) have attracted increasing attention in mod...Endosymbionts influence many aspects of their hosts’ health conditions, including physiology, development, immunity, metabolism, etc. Tree shrews(Tupaia belangeri chinensis) have attracted increasing attention in modeling human diseases and therapeutic responses due to their close relationship with primates. To clarify the situation of symbiotic bacteria from their body surface, oral cavity, and anus, 12 wild and 12 the third generation of captive tree shrews were examined. Based on morphological and cultural characteristics, physiological and biochemical tests, as well as the 16 S rDNA full sequence analysis, 12 bacteria strains were isolated and identified from the wild tree shrews: body surface: Bacillus subtilis(detection rate 42%), Pseudomonas aeruginosa(25%), Staphlococcus aureus(33%), S. Epidermidis(75%), Micrococcus luteus(25%), Kurthia gibsonii(17%); oral cavity: Neisseria mucosa(58%), Streptococcus pneumonia(17%); anus: Enterococcus faecalis(17%), Lactococus lactis(33%), Escherichia coli(92%), Salmonella typhosa(17%); whereas, four were indentified from the third generation captive tree shrews: body surface: S. epidermidis(75%); oral cavity: N.mucosa(67%); anus: L. lactis(33%), E. coli(100%). These results indicate that S. epidermidis, N. mucosa, L. lactis and E. coli were major bacteria in tree shrews, whereas, S. aureus, M. luteus, K. gibsonii, E. faecalis and S. typhosa were species-specific flora. This study facilitates the future use of tree shrews as a standard experimental animal and improves our understanding of the relationship between endosymbionts and their hosts.展开更多
Essential oils are effective antimicrobials on important some pathogenic bacteria and can be added packaging materials due to absorb various surfaces. In this study, the aim is to determinate of antimicrobial effects ...Essential oils are effective antimicrobials on important some pathogenic bacteria and can be added packaging materials due to absorb various surfaces. In this study, the aim is to determinate of antimicrobial effects of methyl cellulose films with containing various proportions thyme, rosemary, coriander, basil and pimento berry oils (1%, 2%, 3% and 4% g/cc) against important bacteria as a surface contaminant Listeria innocua by in vitro. For this purpose, 1 cm diameter discs were cut from methyl cellulose films containing essential oils and inhibition zone diameter which were measured by the agar diffusion method. As the results of these analyses, all prepared active edible methyl cellulose films were antimicrobial effects on Listeria innocua. The most powerful antimicrobial effect achieved with methyl cellulose film including coriander oil on Listeria innocua. And also the weakest antimicrobial effect achieved with methyl cellulose film including rosemary oil on Listeria. All results were significant by statistically (p 〈 0.01) and all analyses were replicated in three times.展开更多
Virgin forests are unique ecosystems, which can be used as etalon for basic biocoenotic investigation. Soil microorganisms are very sensitive reagents on influence of biotical factors, and at the same time are the act...Virgin forests are unique ecosystems, which can be used as etalon for basic biocoenotic investigation. Soil microorganisms are very sensitive reagents on influence of biotical factors, and at the same time are the active producers of phytotoxic and phytostimulating exometabolites. Studies of soil microbiota were conducted in virgin beech forests of Shyrokoluzhansky massif of the Carpathian Biosphere Reserve. It was found the ratio and the number of different ecological-trophic groups of soil microorganisms changes with altitude. So the number of ammonificators with increasing of altitude above sea level was reduced. The soil at altitude of 1,100 meters above sea level was characterized by minimum content of organotrophes -1.22 × 10^6 (CFU-colony forming units/lg.a.d.s.). At the altitude of 500 meters content of ammonificators increased at six times and was 7.07 ×10^6 CFU/lg.a.d.s., which indicates to accumulation of the soil organic matter. Similar changes occurred with the number of bacteria which are using mineral forms of nitrogen for their nutrition. Their maximum quantity (4.32 × 10^6 CFU/lg.a.d.s.) was in the soil of biotope disposed at altitude of 500 meters above sea level. Fluctuations in the number of soil micromycetes of virgin forest ecosystems have not been as significant as the bacterial microbiota (within 17 ×10^3-28 × 10^3 CFU/lg.a.d.s.). Among a wide spectrum of bacterial microbiota were isolated strains with high phytostimulating action.展开更多
Sulfur cycling in the biosphere is tightly interwoven with the cycling of carbon and nitrogen,through various biological and geochemical processes.Marine microorganisms,due to their high abundance,diverse metabolic ac...Sulfur cycling in the biosphere is tightly interwoven with the cycling of carbon and nitrogen,through various biological and geochemical processes.Marine microorganisms,due to their high abundance,diverse metabolic activities,and tremendous adaptation potential,play an essential role in the functioning of global biogeochemical cycles and linking sulfur transformation to the cycling of carbon and nitrogen.Currently many coastal regions are severely stressed by hypoxic or anoxic conditions,leading to the accumulation of toxic sulfide.A number of recent studies have demonstrated that dissimilatory sulfur oxidation by heterotrophic bacteria can protect marine ecosystems from sulfide toxicity.Sulfur-oxidizing bacteria have evolved diverse phylogenetic and metabolic characteristics to fill an array of ecological niches in various marine habitats.Here,we review the recent findings on the microbial communities that are involved in the oxidation of inorganic sulfur compounds and address how the two elements of sulfur and carbon are interlinked and influence the ecology and biogeochemistry in the ocean.Delineating the metabolic enzymes and pathways of sulfur-oxidizing bacteria not only provides an insight into the microbial sulfur metabolism,but also helps us understand the effects of changing environmental conditions on marine sulfur cycling and reinforces the close connection between sulfur and carbon cycling in the ocean.展开更多
A survey was conducted to determine whether mycotoxins were present in the foods consumed by red-crowned cranes(Grus japonensis) in the Yancheng Biosphere Reserve, China. Collected in the reserve's core, buffer, an...A survey was conducted to determine whether mycotoxins were present in the foods consumed by red-crowned cranes(Grus japonensis) in the Yancheng Biosphere Reserve, China. Collected in the reserve's core, buffer, and experimental zones during overwintering periods of 2013 to 2015, a total of 113 food samples were analyzed for aflatoxin B1, deoxynivalenol, zearalenone, T-2 toxin, and ochratoxin A using high performance liquid chromatography(HPLC). The contamination incidences vary among different zones and the mycotoxins levels of different food samples also presented disparity. Average mycotoxin concentration from rice grain was greater than that from other food types. Among mycotoxin-positive samples, 59.3% were simultaneously contaminated with more than one toxin. This study demonstrated for the first time that red-crowned cranes were exposed to mycotoxins in the Yancheng Biosphere Reserve and suggested that artificial wetlands could not be considered good habitats for the birds in this reserve, especially rice fields.展开更多
This study addresses heat transfer performance of various configurations of coiled non-circular tubes, e.g., in-plane spiral ducts, helical spiral ducts, and conical spiral ducts. The laminar flow of a Newtonian fluid...This study addresses heat transfer performance of various configurations of coiled non-circular tubes, e.g., in-plane spiral ducts, helical spiral ducts, and conical spiral ducts. The laminar flow of a Newtonian fluid in helical coils made of square cross section tubes is simulated using the computational fluid dynamic approach. The effects of tube Reynolds number, fluid Prandtl number, coil diameter, etc., are quantified and discussed. Both constant wall temperature and constant heat flux conditions are simulated. The effect of in-plane coil versus a cylindrical design of constant coil, as well as a conical coil design is discussed. Results are compared with those for a straight square tube of the same length as that used to form the coils. Advantages and limitations of using coiled tubes are discussed in light of the numerical results.展开更多
A draft genome sequence of Streptomyces ansochromogenes 7100 was generated using 454 sequencing technology. In combination with local BLAST searches and gap filling techniques, a comprehensive antiSMASH-based method w...A draft genome sequence of Streptomyces ansochromogenes 7100 was generated using 454 sequencing technology. In combination with local BLAST searches and gap filling techniques, a comprehensive antiSMASH-based method was adopted to assemble the secondary metabolite biosynthetic gene clusters in the draft genome of S. ansochromogenes. A total of at least 35 putative gene clusters were identified and assembled. Transcriptional analysis showed that 20 of the 35 gene clusters were expressed in either or all of the three different media tested, whereas the other 15 gene clusters were silent in all three different media. This study provides a comprehensive method to identify and assemble secondary metabolite biosynthetic gene clusters in draft genomes of Streptomyces, and will significantly promote functional studies of these secondary metabolite biosynthetic gene clusters.展开更多
基金Supported by The 90th Anniversary of Chulalongkorn University Fund(Ratchada phiseksomphot Endowment Fund)the grant of Ratchada phiseksomphot,Faculty of Medicine,Chulalongkorn University,Bangkok,Thailand
文摘AIM:To determine the anti-Helicobacter property of Lactobacillus plantarum B7(L.plantarum)B7 supernatants in vitro and the protective effects of L.plantarum B7 on serum tumor necrosis factor-alpha(TNF-?),gastric malondialdehyde(MDA)level,apoptosis,and histopathology in Helicobacter pylori(H.pylori)-induced gastric inflammation in rats. METHODS:In vitro,the inhibition of H.pylori growth was examined using L.plantarum B7 supernatants at pH 4 and pH 7 and at the concentration of 1×,5×and 10×on plates inoculated with H.pylori.The inhibitory effect of H.pylori was interpreted by the size of the inhibition zone.In vitro,male Sprague-Dawley rats were randomly divided into four groups including group 1(control group),group 2(H.pylori infected group), group 3(H.pylori infected with L.plantarum B7 106 CFUs/mL treated group)and group 4(H.pylori infected with L.plantarum B7 1010 CFUs/mL treated group).One week after H.pylori inoculation,L.plantarum B7 106 CFUs/mL or 10 10 CFUs/mL were fed once daily to group 3 and group 4,respectively,for one week.Blood and gastric samples were collected at the end of the study. RESULTS:In vitro,at intact pH 4,mean inhibitory zone diameters of 8.5 mm and 13 mm were noted at concentrations of 5×and 10×of L.plantarum B7 supernatant disks,respectively.At adjusted pH 7, L.plantarum B7 supernatants at concentrations of 5 ×and 10×yielded mean inhibitory zone diameters of 6.5 mm and 11 mm,respectively.In the in vitro study, in group 2,stomach histopathology revealed mild to moderate H.pylori colonization and inflammation.The level of gastric MDA and epithelial cell apoptosis were significantly increased compared with group 1.The serum TNF-??level was significant decreased in group 3 compared with group 2(P<0.05).In addition,L.plantarum B7 treatments resulted in a significant improvement in stomach pathology,and decreased gastric MDA level and apoptotic epithelial cells. CONCLUSION:L.plantarum B7 supernatant inhibits H.pylori growth.This inhibition was dose-dependent and greater at pH 4.Moreover,L.plantarum B7 attenuated H.pylori-induced gastric inflammation.
文摘Alpinia galanga, Eurycoma longifolia Jack and Syzygium aromaticum have been widely used in traditional medicine for decades. Antimicrobial activities for individual crude extract were well established. Crude methanolic extracts of Alpinia galanga, Eurycoma longifolia Jack and Syzygium aromaticum and the combination for all extracts were tested using well diffusion techniques against Saccharomyces cerevisiae (ATCC 9763) and Escherichia coli (ATCC 25922). The mixed extracts were prepared based on the concentration ratio of 50 μg/μL which are 1:1, 1:1:1 and 1:2:2. Single Syzygium aromaticum extract showed higher inhibition zone on Saccharomyces cerevisiae compared to Escherichia coli. There is reduction in diameter of inhibition zone for single extract and mixture extracts either in combination of two or three extracts tested on Saccharomyces cerevisiae and Escherichia coli growth but they are not significant. In conclusion, Syzygium aromaticum showed highest activity against Saccharomyces cerevisiae and Escherichia coli. Reduction in diameter of inhibition zone indicated that Alpinia galanga and Eurycoma longifolia Jack extracts had antagonistic effect with Syzygium aromaticum.
基金This study was supported by the National 863 Project of China (2012AA021801) and the Project of Frontier Study of Foundation, CAS (KSCX2-EW-R-11, KSCX2-EW-J-23)
文摘Endosymbionts influence many aspects of their hosts’ health conditions, including physiology, development, immunity, metabolism, etc. Tree shrews(Tupaia belangeri chinensis) have attracted increasing attention in modeling human diseases and therapeutic responses due to their close relationship with primates. To clarify the situation of symbiotic bacteria from their body surface, oral cavity, and anus, 12 wild and 12 the third generation of captive tree shrews were examined. Based on morphological and cultural characteristics, physiological and biochemical tests, as well as the 16 S rDNA full sequence analysis, 12 bacteria strains were isolated and identified from the wild tree shrews: body surface: Bacillus subtilis(detection rate 42%), Pseudomonas aeruginosa(25%), Staphlococcus aureus(33%), S. Epidermidis(75%), Micrococcus luteus(25%), Kurthia gibsonii(17%); oral cavity: Neisseria mucosa(58%), Streptococcus pneumonia(17%); anus: Enterococcus faecalis(17%), Lactococus lactis(33%), Escherichia coli(92%), Salmonella typhosa(17%); whereas, four were indentified from the third generation captive tree shrews: body surface: S. epidermidis(75%); oral cavity: N.mucosa(67%); anus: L. lactis(33%), E. coli(100%). These results indicate that S. epidermidis, N. mucosa, L. lactis and E. coli were major bacteria in tree shrews, whereas, S. aureus, M. luteus, K. gibsonii, E. faecalis and S. typhosa were species-specific flora. This study facilitates the future use of tree shrews as a standard experimental animal and improves our understanding of the relationship between endosymbionts and their hosts.
文摘Essential oils are effective antimicrobials on important some pathogenic bacteria and can be added packaging materials due to absorb various surfaces. In this study, the aim is to determinate of antimicrobial effects of methyl cellulose films with containing various proportions thyme, rosemary, coriander, basil and pimento berry oils (1%, 2%, 3% and 4% g/cc) against important bacteria as a surface contaminant Listeria innocua by in vitro. For this purpose, 1 cm diameter discs were cut from methyl cellulose films containing essential oils and inhibition zone diameter which were measured by the agar diffusion method. As the results of these analyses, all prepared active edible methyl cellulose films were antimicrobial effects on Listeria innocua. The most powerful antimicrobial effect achieved with methyl cellulose film including coriander oil on Listeria innocua. And also the weakest antimicrobial effect achieved with methyl cellulose film including rosemary oil on Listeria. All results were significant by statistically (p 〈 0.01) and all analyses were replicated in three times.
文摘Virgin forests are unique ecosystems, which can be used as etalon for basic biocoenotic investigation. Soil microorganisms are very sensitive reagents on influence of biotical factors, and at the same time are the active producers of phytotoxic and phytostimulating exometabolites. Studies of soil microbiota were conducted in virgin beech forests of Shyrokoluzhansky massif of the Carpathian Biosphere Reserve. It was found the ratio and the number of different ecological-trophic groups of soil microorganisms changes with altitude. So the number of ammonificators with increasing of altitude above sea level was reduced. The soil at altitude of 1,100 meters above sea level was characterized by minimum content of organotrophes -1.22 × 10^6 (CFU-colony forming units/lg.a.d.s.). At the altitude of 500 meters content of ammonificators increased at six times and was 7.07 ×10^6 CFU/lg.a.d.s., which indicates to accumulation of the soil organic matter. Similar changes occurred with the number of bacteria which are using mineral forms of nitrogen for their nutrition. Their maximum quantity (4.32 × 10^6 CFU/lg.a.d.s.) was in the soil of biotope disposed at altitude of 500 meters above sea level. Fluctuations in the number of soil micromycetes of virgin forest ecosystems have not been as significant as the bacterial microbiota (within 17 ×10^3-28 × 10^3 CFU/lg.a.d.s.). Among a wide spectrum of bacterial microbiota were isolated strains with high phytostimulating action.
基金supported by the National Key Research and Development Program of China (Grant No. 2016YFA0601103)the National Natural Science Foundation of China (Grant No. 41606134)the Fundamental Research Funds of Shandong University as well
文摘Sulfur cycling in the biosphere is tightly interwoven with the cycling of carbon and nitrogen,through various biological and geochemical processes.Marine microorganisms,due to their high abundance,diverse metabolic activities,and tremendous adaptation potential,play an essential role in the functioning of global biogeochemical cycles and linking sulfur transformation to the cycling of carbon and nitrogen.Currently many coastal regions are severely stressed by hypoxic or anoxic conditions,leading to the accumulation of toxic sulfide.A number of recent studies have demonstrated that dissimilatory sulfur oxidation by heterotrophic bacteria can protect marine ecosystems from sulfide toxicity.Sulfur-oxidizing bacteria have evolved diverse phylogenetic and metabolic characteristics to fill an array of ecological niches in various marine habitats.Here,we review the recent findings on the microbial communities that are involved in the oxidation of inorganic sulfur compounds and address how the two elements of sulfur and carbon are interlinked and influence the ecology and biogeochemistry in the ocean.Delineating the metabolic enzymes and pathways of sulfur-oxidizing bacteria not only provides an insight into the microbial sulfur metabolism,but also helps us understand the effects of changing environmental conditions on marine sulfur cycling and reinforces the close connection between sulfur and carbon cycling in the ocean.
基金supported by the National Natural Science Foundation of China(No.31402268)the Natural Science Foundation of Jiangsu Province of China(Nos.BK20140691 and BK2011083)the Priority Academic Program Development of Jiangsu Higher Education Institutions(PAPD),China
文摘A survey was conducted to determine whether mycotoxins were present in the foods consumed by red-crowned cranes(Grus japonensis) in the Yancheng Biosphere Reserve, China. Collected in the reserve's core, buffer, and experimental zones during overwintering periods of 2013 to 2015, a total of 113 food samples were analyzed for aflatoxin B1, deoxynivalenol, zearalenone, T-2 toxin, and ochratoxin A using high performance liquid chromatography(HPLC). The contamination incidences vary among different zones and the mycotoxins levels of different food samples also presented disparity. Average mycotoxin concentration from rice grain was greater than that from other food types. Among mycotoxin-positive samples, 59.3% were simultaneously contaminated with more than one toxin. This study demonstrated for the first time that red-crowned cranes were exposed to mycotoxins in the Yancheng Biosphere Reserve and suggested that artificial wetlands could not be considered good habitats for the birds in this reserve, especially rice fields.
文摘This study addresses heat transfer performance of various configurations of coiled non-circular tubes, e.g., in-plane spiral ducts, helical spiral ducts, and conical spiral ducts. The laminar flow of a Newtonian fluid in helical coils made of square cross section tubes is simulated using the computational fluid dynamic approach. The effects of tube Reynolds number, fluid Prandtl number, coil diameter, etc., are quantified and discussed. Both constant wall temperature and constant heat flux conditions are simulated. The effect of in-plane coil versus a cylindrical design of constant coil, as well as a conical coil design is discussed. Results are compared with those for a straight square tube of the same length as that used to form the coils. Advantages and limitations of using coiled tubes are discussed in light of the numerical results.
基金supported by grants from the Ministry of Science and Technology of China (2013CB734001)the National Natural Science Foundation of China (31270110, 31030003)the Knowledge Innovation Program of the Chinese Academy of Sciences (KSCX2-EW-J-6)
文摘A draft genome sequence of Streptomyces ansochromogenes 7100 was generated using 454 sequencing technology. In combination with local BLAST searches and gap filling techniques, a comprehensive antiSMASH-based method was adopted to assemble the secondary metabolite biosynthetic gene clusters in the draft genome of S. ansochromogenes. A total of at least 35 putative gene clusters were identified and assembled. Transcriptional analysis showed that 20 of the 35 gene clusters were expressed in either or all of the three different media tested, whereas the other 15 gene clusters were silent in all three different media. This study provides a comprehensive method to identify and assemble secondary metabolite biosynthetic gene clusters in draft genomes of Streptomyces, and will significantly promote functional studies of these secondary metabolite biosynthetic gene clusters.