The internal transcribed spacer (ITS) region (ITS1, ITS2 and 5.8S rDNA) of the nuclear ribosomal DNA (nrDNA) was amplified via the PCR method in seventeen different isolates of Phytophthora sojae using the commo...The internal transcribed spacer (ITS) region (ITS1, ITS2 and 5.8S rDNA) of the nuclear ribosomal DNA (nrDNA) was amplified via the PCR method in seventeen different isolates of Phytophthora sojae using the common primers of the ITS of fungi. Around 800 bp- 1,000 bp fragments were obtained based on the DL2000 marker and the sequences of the PCR products were tested. Taking isolate USA as outgroup, the phylogenetic tree was constructed by means of maximum parsimony analysis, and the genetic evolution among isolates was analyzed. The results showed that there is a great difference between the base constitution of ITS 1 and ITS2 among various isolates. The seventeen isolates are classified into three groups, and the isolates from the same region belong to the same group, which shows the variation in geography.展开更多
The effects of inoculum forms (single-spore, multi-spores, or colonized root pieces) and host plants (Nicotiana tabacum L., Sorghum sudanense (Piper) Stapf, and Trifolium repens L.) on the development and inoculum pot...The effects of inoculum forms (single-spore, multi-spores, or colonized root pieces) and host plants (Nicotiana tabacum L., Sorghum sudanense (Piper) Stapf, and Trifolium repens L.) on the development and inoculum potential (IP) of the arbuscular mycorrhizal fungi (AMF) :Glo-mus macrocarpum Tul & Tul, donuis mosseae (Nicol & Gerd.) Gerdemann & Trappe, Glomus ver-siforme (Karsten) Berch, and Sclerocystis sinu/osa Gerdemann & Bakhi cultured in pots were investigated. The lag phase of treatment with 50 spores or 0.5 g (fresh weight) of colonized root pieces was 4 weeks, much shorter than that of the treatment with 1 spore (8 weeks); the value of IP (VIP) and percentage of root colonization (PRC) of the former were greater than those of the latter. Only on the early stages of colonization was there difference between the 50 spores and the 0.5 g (fresh weight) of colonized root piece inoculation treatments. The EP per plant inoculated with 0.5 g (fresh weight) of colonized root pieces of AMF was greater than that of the other two treatments except G. versiforme on Nicotiana tabacum, while the PRC of the plants inoculated with 50 spores and 0.5 g (fresh weight) of colonized root pieces of AMF was higher than that of the 1 spore inoculation after 10 weeks. Trie VIP of AMF on Trifolium repens was significantly higher than that on the other two hosts. The VIP of G. mosseae, G. versiforme, and S. sinuosa was respectively greater than that of G. macrocarpum. This suggested that different species of AMF produced different VIP of the inoculum . Nicotiana tabacum was much better than the other host plants which used to be inoculated with single spore, and to produce inocula of AMF.展开更多
Plant phylogeny constrains orchid mycorrhizal(OrM) fungal community composition in some orchids. Here, we investigated the structures of the OrM fungal communities of eight Dendrobium species in one niche to determine...Plant phylogeny constrains orchid mycorrhizal(OrM) fungal community composition in some orchids. Here, we investigated the structures of the OrM fungal communities of eight Dendrobium species in one niche to determine whether similarities in the OrM fungal communities correlated with the phylogeny of the host plants and whether the Dendrobium-OrM fungal interactions are phylogenetically conserved. A phylogeny based on DNA data was constructed for the eight coexisting Dendrobium species,and the OrM fungal communities were characterized by their roots. There were 31 different fungal lineages associated with the eight Dendrobium species. In total, 82.98% of the identified associations belonging to Tulasnellaceae, and a smaller proportion involved members of the unknown Basidiomycota(9.67%). Community analyses revealed that phylogenetically related Dendrobium tended to interact with a similar set of Tulasnellaceae fungi. The interactions between Dendrobium and Tulasnellaceae fungi were significantly influenced by the phylogenetic relationships among the Dendrobium species. Our results provide evidence that the mycorrhizal specificity in the eight coexisting Dendrobium species was phylogenetically conserved.展开更多
Plant growth-promoting rhizobacteria (PGPR) have been widely recognized as an important agent, especially as a biofertilizer, in agricultural systems. The objectives of this study were to select effective PGPR for C...Plant growth-promoting rhizobacteria (PGPR) have been widely recognized as an important agent, especially as a biofertilizer, in agricultural systems. The objectives of this study were to select effective PGPR for Chinese kale (Brassica oleracea var. alboglabra) cultivation and to investigate the effect of their inoculation on indigenous microbial community structure. The Bacillus sp. SUT1 and Pseudomonas sp. SUT19 were selected for determining the efficiency in promoting Chinese kale growth in both pot and field experiments. In the field experiment, PGPR amended with compost gave the highest yields among all treatments. The Chinese kale growth promotion may be directly affected by PGPR inoculation. The changes of microbial community structure in the rhizosphere of Chinese kale following PGPR inoculation were examined by denaturing gradient gel electrophoresis (DGGE) and principal coordinate analysis. The DGGE fingerprints of 16S rDNA amplified from total community DNA in the rhizosphere confirmed that our isolates were established in the rhizosphere throughout this study. The microbial community structures were slightly different among all the treatments, and the major changes depended on stages of plant growth. DNA sequencing of excised DGGE bands showed that the dominant species in microbial community structure in the rhizosphere were not mainly interfered by PGPR, but strongly influenced by plant development. The microbial diversity as revealed by diversity indices was not different between the PGPR-inoculated and uninoculated treatments. In addition, the rhizosphere soil had more influence on eubacterial diversity, whereas it did not affect archaebacterial and fungal diversities.展开更多
基金This work was supported by National Natural Science Fundation of China (No.30400285, 30671317), Postdoctoral Grant from Ag-riculture Sciences Academy of Heilongjiang Province (No. LRB06-010), China Postdoctoral Grant, Item for Teachers from Heilongjiang University (No. 140022), Young People’s Science Fund of Heilongjiang Province (No. QC06C012), 973(No. 2004CB117203-4), the Opening Fund of Key Opening Laboratory of Physiology and Ecology of Crop in Cold Terra of Agriculture Ministry "the Cloning and Mapping of cDNA Sequence from Related Gene Resistant to Phytophthora sojae and International Tech-nology Cooperation Item (No. 2005DFA30340).
文摘The internal transcribed spacer (ITS) region (ITS1, ITS2 and 5.8S rDNA) of the nuclear ribosomal DNA (nrDNA) was amplified via the PCR method in seventeen different isolates of Phytophthora sojae using the common primers of the ITS of fungi. Around 800 bp- 1,000 bp fragments were obtained based on the DL2000 marker and the sequences of the PCR products were tested. Taking isolate USA as outgroup, the phylogenetic tree was constructed by means of maximum parsimony analysis, and the genetic evolution among isolates was analyzed. The results showed that there is a great difference between the base constitution of ITS 1 and ITS2 among various isolates. The seventeen isolates are classified into three groups, and the isolates from the same region belong to the same group, which shows the variation in geography.
基金Supported by International foundation for Science (IFS)National Natural Science Foundation of China.
文摘The effects of inoculum forms (single-spore, multi-spores, or colonized root pieces) and host plants (Nicotiana tabacum L., Sorghum sudanense (Piper) Stapf, and Trifolium repens L.) on the development and inoculum potential (IP) of the arbuscular mycorrhizal fungi (AMF) :Glo-mus macrocarpum Tul & Tul, donuis mosseae (Nicol & Gerd.) Gerdemann & Trappe, Glomus ver-siforme (Karsten) Berch, and Sclerocystis sinu/osa Gerdemann & Bakhi cultured in pots were investigated. The lag phase of treatment with 50 spores or 0.5 g (fresh weight) of colonized root pieces was 4 weeks, much shorter than that of the treatment with 1 spore (8 weeks); the value of IP (VIP) and percentage of root colonization (PRC) of the former were greater than those of the latter. Only on the early stages of colonization was there difference between the 50 spores and the 0.5 g (fresh weight) of colonized root piece inoculation treatments. The EP per plant inoculated with 0.5 g (fresh weight) of colonized root pieces of AMF was greater than that of the other two treatments except G. versiforme on Nicotiana tabacum, while the PRC of the plants inoculated with 50 spores and 0.5 g (fresh weight) of colonized root pieces of AMF was higher than that of the 1 spore inoculation after 10 weeks. Trie VIP of AMF on Trifolium repens was significantly higher than that on the other two hosts. The VIP of G. mosseae, G. versiforme, and S. sinuosa was respectively greater than that of G. macrocarpum. This suggested that different species of AMF produced different VIP of the inoculum . Nicotiana tabacum was much better than the other host plants which used to be inoculated with single spore, and to produce inocula of AMF.
基金supported by the National Natural Sciences Foundation of China (81274197)
文摘Plant phylogeny constrains orchid mycorrhizal(OrM) fungal community composition in some orchids. Here, we investigated the structures of the OrM fungal communities of eight Dendrobium species in one niche to determine whether similarities in the OrM fungal communities correlated with the phylogeny of the host plants and whether the Dendrobium-OrM fungal interactions are phylogenetically conserved. A phylogeny based on DNA data was constructed for the eight coexisting Dendrobium species,and the OrM fungal communities were characterized by their roots. There were 31 different fungal lineages associated with the eight Dendrobium species. In total, 82.98% of the identified associations belonging to Tulasnellaceae, and a smaller proportion involved members of the unknown Basidiomycota(9.67%). Community analyses revealed that phylogenetically related Dendrobium tended to interact with a similar set of Tulasnellaceae fungi. The interactions between Dendrobium and Tulasnellaceae fungi were significantly influenced by the phylogenetic relationships among the Dendrobium species. Our results provide evidence that the mycorrhizal specificity in the eight coexisting Dendrobium species was phylogenetically conserved.
基金Supported by the Suranaree University of Technology and the Higher Education Research Promotionthe National Research University Project of Thailand,Office of the Higher Education Commission
文摘Plant growth-promoting rhizobacteria (PGPR) have been widely recognized as an important agent, especially as a biofertilizer, in agricultural systems. The objectives of this study were to select effective PGPR for Chinese kale (Brassica oleracea var. alboglabra) cultivation and to investigate the effect of their inoculation on indigenous microbial community structure. The Bacillus sp. SUT1 and Pseudomonas sp. SUT19 were selected for determining the efficiency in promoting Chinese kale growth in both pot and field experiments. In the field experiment, PGPR amended with compost gave the highest yields among all treatments. The Chinese kale growth promotion may be directly affected by PGPR inoculation. The changes of microbial community structure in the rhizosphere of Chinese kale following PGPR inoculation were examined by denaturing gradient gel electrophoresis (DGGE) and principal coordinate analysis. The DGGE fingerprints of 16S rDNA amplified from total community DNA in the rhizosphere confirmed that our isolates were established in the rhizosphere throughout this study. The microbial community structures were slightly different among all the treatments, and the major changes depended on stages of plant growth. DNA sequencing of excised DGGE bands showed that the dominant species in microbial community structure in the rhizosphere were not mainly interfered by PGPR, but strongly influenced by plant development. The microbial diversity as revealed by diversity indices was not different between the PGPR-inoculated and uninoculated treatments. In addition, the rhizosphere soil had more influence on eubacterial diversity, whereas it did not affect archaebacterial and fungal diversities.