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CUDA下受体评分网格生成并行算法 被引量:1
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作者 李正夫 王希诚 郭权 《计算机应用研究》 CSCD 北大核心 2013年第3期814-816,共3页
针对分子对接中生成评分网格需要花费很多的计算时间这一问题,提出了一种基于统一计算设备架构(CUDA)的评分网格生成并行算法。该算法把传统计算方法中三维计算空间中的一维通过在图形处理单元(GPU)上进行并行处理,使得总生成时间得到... 针对分子对接中生成评分网格需要花费很多的计算时间这一问题,提出了一种基于统一计算设备架构(CUDA)的评分网格生成并行算法。该算法把传统计算方法中三维计算空间中的一维通过在图形处理单元(GPU)上进行并行处理,使得总生成时间得到了降低,提高了评分网格的生成效率。实验结果表明,借助于GPU的浮点计算能力,提出的并行算法对比传统的计算方法可以显著缩短评分网格的生成时间,为评分网格的生成提供一种新的方式。 展开更多
关键词 统一计算设备架构 并行算法 评分网格 分子对接
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Numerical simulations of the coastal effects of tsunami waves caused by the 1993 Hokkaido-Nansei-Oki earthquake
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作者 潘文亮 王盛安 蔡树群 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2010年第5期1029-1039,共11页
Generally,tsunami waves become hazardous only when approaching the coast.Studying the runup and inundation of tsunami waves is important for understanding the tsunami evolution and for tsunami hazard assessment.Here,w... Generally,tsunami waves become hazardous only when approaching the coast.Studying the runup and inundation of tsunami waves is important for understanding the tsunami evolution and for tsunami hazard assessment.Here,we simulated the 1993 Hokkaido-Nansei-Oki(HNO) tsunami using a finite-difference model based on nonlinear shallow-water equations.We focused on the runup and inundation of tsunami wave propagation onto coastal area of Okushiri Island near Hokkaido,Japan,and investigate the relationship of different runup heights with the morphology and bathymetry of the seashore.In the simulation,a nested 4-layer grid system and moving boundary technique are adopted to study runup and inundation.The calculated tsunami heights and inundations in the region agreed well with field measurements.The local bathymetric and topographic characteristics had a first-order effect on the runup.Numerical experiments show that the focusing of certain local bathymetric features would amplify both wave height and current velocity remarkably.The results show that computation on dense grids is necessary to reproduce the observed runup heights,and inundation velocity is an important factor preventing tsunami devastation.In addition,we discussed the potential capability of sediment transport to illustrate the impact of tsunami waves on coastal geomorphology. 展开更多
关键词 TSUNAMI coastal effects RUNUP INUNDATION numerical modeling
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