期刊文献+
共找到10篇文章
< 1 >
每页显示 20 50 100
基于智能检测的DNA序列载体片段清除工具
1
作者 李生林 谢洪涛 高黎 《西南师范大学学报(自然科学版)》 CAS CSCD 北大核心 2010年第4期10-15,共6页
针对传统DNA载体检测和清除工具的不足,实现一种基于智能检测的DNA载体检测新工具.该工具的核心思想是无需预先给定克隆载体序列模版、剪接位点和克隆适配片段等信息,通过建立从载体出现概率到序列权重的映射,把载体片段的检测转化为求... 针对传统DNA载体检测和清除工具的不足,实现一种基于智能检测的DNA载体检测新工具.该工具的核心思想是无需预先给定克隆载体序列模版、剪接位点和克隆适配片段等信息,通过建立从载体出现概率到序列权重的映射,把载体片段的检测转化为求给定序列中具有最大权重的k个不重叠相交的子序列问题,并且引入了罚函数控制避免对载体序列的过度清除.实验结果表明该工具能显著提高载体清除的效率和准确性,在超长序列处理的时候更稳定、错误率更低. 展开更多
关键词 智能检测 载体片段 DNA序列 载体清除
下载PDF
含2A片段的重组黄热病毒17D疫苗表达载体的构建
2
作者 XiaowuPang 付文川 +3 位作者 郭银汉 张立树 谢天培 Xinbin Gu 《生物工程学报》 CAS CSCD 北大核心 2006年第3期492-498,共7页
黄热疫苗是一种减毒的黄热病毒17D(YF-17D)活疫苗,是现有疫苗中最安全、最有效的疫苗之一,适于发展为疫苗载体。用RT-PCR法扩增出覆盖YF-17D全长基因组的3个cDNA片段:5′cDNA(A)、3′cDNA(B)和中间cDNA(C),同时引入SP6增强子序列、酶切... 黄热疫苗是一种减毒的黄热病毒17D(YF-17D)活疫苗,是现有疫苗中最安全、最有效的疫苗之一,适于发展为疫苗载体。用RT-PCR法扩增出覆盖YF-17D全长基因组的3个cDNA片段:5′cDNA(A)、3′cDNA(B)和中间cDNA(C),同时引入SP6增强子序列、酶切位点和重复序列。顺序将A和B同E.coli-yeast穿梭质粒pRS424连接,再与C共转染酵母菌,利用缺少色氨酸和尿嘧啶的选择性固体培养基筛选出含YF-17D全长基因组的cDNA质粒。以该质粒为模板,经过DNA重组和酵母同源重组,获得含有口蹄疫病毒蛋白水解酶2A片段的重组YF-17D表达载体。将该表达载体体外转录后,电击转染BHK-21细胞。间接免疫荧光检测结果表明,RNA转录体在BHK-21细胞中进行了稳定的表达;滴度测定与形态学观察结果表明,重组病毒在细胞中的生长曲线等特征同母本YF-17D十分相似。结果提示,利用酵母菌同源重组在2A部位引入异种抗原基因,重组YF-17D表达载体pRS-YF-2A1具有成为高效活疫苗表达载体的潜力。 展开更多
关键词 黄热病毒17D 表达载体 2A片段 全长cDNA 同源重组
下载PDF
慢病毒介导Survivin shRNA与结肠腺瘤息肉易感基因片段联合对HT-29细胞的影响 被引量:8
3
作者 袁禧先 隋子奇 +5 位作者 孙理婷 杨延涛 张爽 薛鸿鹏 葛文松 王凤荣 《世界华人消化杂志》 CAS 2015年第14期2250-2255,共6页
目的:观察Survivin sh RNA、结肠腺瘤息肉易感基因(adenomatous polyposis coli,APC)片段联合对HT-29细胞Survivin表达及细胞增殖的影响.方法:构建Survivin sh RNA慢病毒载体、A P C有效片段慢病毒载体,对H T-29细胞分别采用单慢病毒载... 目的:观察Survivin sh RNA、结肠腺瘤息肉易感基因(adenomatous polyposis coli,APC)片段联合对HT-29细胞Survivin表达及细胞增殖的影响.方法:构建Survivin sh RNA慢病毒载体、A P C有效片段慢病毒载体,对H T-29细胞分别采用单慢病毒载体侵染及联合侵染.实验分阴性对照组、空载组、sh RNA组、APC组、sh RNA+APC联合组,对侵染48 h后的HT-29细胞进行real-time PCR、Western blot及CCK8细胞增殖检测,检测Survivin m RNA、蛋白表达水平及对细胞增殖的影响.结果:(1)sh RNA+APC联合组与其余各组相比,Survivin m RNA表达量显著下降(P<0.05);(2)s h R N A+A P C联合组与其余各组相比,其Survivin蛋白抑制率明显高于其余各组(P<0.05);(3)sh RNA+APC联合组与其余各组相比,细胞增殖速度低于其余各组(P<0.05).结论:Survivin sh RNA与APC片段联合能抑制HT-29细胞内Survivin m RNA及蛋白的表达,同时能够抑制细胞增殖能力,并且优于单个基因侵染. 展开更多
关键词 结肠癌 SURVIVIN SHRNA APC有效片段慢病毒载体
下载PDF
分步克隆法构建人拓扑异构酶Ⅲalpha真核反义表达载体及鉴定
4
作者 周献锋 曹建平 +4 位作者 王明明 罗加林 朱巍 郑斯英 朱财英 《苏州大学学报(医学版)》 CAS 2003年第6期635-638,共4页
目的 应用分步克隆法构建人拓扑异构酶Ⅲalpha (hTOP 3alpha)真核反义表达载体 ,为进一步阐明其与控制细胞周期的相关基因ATM之间的相互作用 ,研究ATM的生物学功能奠定基础。方法 采用分步克隆法首先用HindⅢ和EcoRI双酶切构建插入 2 ... 目的 应用分步克隆法构建人拓扑异构酶Ⅲalpha (hTOP 3alpha)真核反义表达载体 ,为进一步阐明其与控制细胞周期的相关基因ATM之间的相互作用 ,研究ATM的生物学功能奠定基础。方法 采用分步克隆法首先用HindⅢ和EcoRI双酶切构建插入 2 .6kb的片段 ,再用EcoRI酶切插入另一 1kb的片段 ,最终获得人拓扑异构酶Ⅲ真核反义表达的重组载体。结果 经酶切、测序鉴定 ,人拓扑异构酶Ⅲ真核反义表达载体构建成功。结论 为研究ATM基因与人拓扑异构酶Ⅲ的相互作用 ,阐明其生物学功能奠定了基础 。 展开更多
关键词 人拓扑异构酶Ⅲ大片段载体构建 反义核酸 ATM基因
下载PDF
转基因玉米NK603结构特异定量PCR方法的建立 被引量:3
5
作者 宋君 雷绍荣 +3 位作者 向冰 刘勇 王东 尹全 《西南农业学报》 CSCD 北大核心 2011年第6期2044-2048,共5页
根据转基因玉米NK603载体构建特异序列,设计引物和Taqman探针,建立了转基因玉米NK603载体构建特异结构定量PCR检测方法,并采用该法检测了2%含量的NK603标准品(不确定度为10%)。结果显示,采用本文构建的方法获得的标准曲线斜率,在-3.6~-... 根据转基因玉米NK603载体构建特异序列,设计引物和Taqman探针,建立了转基因玉米NK603载体构建特异结构定量PCR检测方法,并采用该法检测了2%含量的NK603标准品(不确定度为10%)。结果显示,采用本文构建的方法获得的标准曲线斜率,在-3.6~-3.1之间,相关系数大于0.99,扩增效率为98.1%,在90%~110%的范围内。样品检测结果(1.6%)接近已知含量(2%,不确定度为10%)。表明本文建立的转基因玉米NK603结构特异定量PCR检测方法,可以在日常检验中推广应用。 展开更多
关键词 NK603 zSSⅡb 载体构建特异片段 定量检测
下载PDF
转基因玉米MON863结构特异定量PCR方法的建立 被引量:2
6
作者 宋君 王东 +4 位作者 游米沙 尹全 刘勇 雷绍荣 向云 《西南农业学报》 CSCD 北大核心 2011年第4期1251-1255,共5页
根据转基因玉米MON863载体构建特异结构,设计引物和Taqman探针,建立了转基因玉米MON863载体构建特异结构定量PCR检测方法,并采用该法定量检测了1%含量的MON863标准品(不确定度为10%)。结果显示,采用本文构建的方法获得标准曲线斜率,在-... 根据转基因玉米MON863载体构建特异结构,设计引物和Taqman探针,建立了转基因玉米MON863载体构建特异结构定量PCR检测方法,并采用该法定量检测了1%含量的MON863标准品(不确定度为10%)。结果显示,采用本文构建的方法获得标准曲线斜率,在-3.6~-3.1之间,相关系数大于0.99,扩增效率为105.436%,在90%~110%的范围内。待检样品的定量检测结果(1.08%)非常接近真实值(1%,不确定度为10%),表明本文建立的转基因玉米MON863结构特异定量PCR检测重复性好,灵敏度和准确度高,可以在日常检验中推广应用。 展开更多
关键词 MON863 zSSⅡb 载体构建特异片段 定量检测
下载PDF
Construction of Plant Antisense Expression Vector with Defective in Anther Dehiscence1 Gene Fragment of Chinese Kale
7
作者 Yaoguo Qin Jianjun Lei +3 位作者 Cuiqin Yang Yongli Zhai Bihao Cao Guoju Chen 《Journal of Life Sciences》 2011年第6期416-420,共5页
A pair of primers was designed according to the reported conserved sequence of the defective in anther dehiscencel (DAD1) gene ofArabidopsis thaliana and Brassica rapa. A 558 bp long fragment was amplified from geno... A pair of primers was designed according to the reported conserved sequence of the defective in anther dehiscencel (DAD1) gene ofArabidopsis thaliana and Brassica rapa. A 558 bp long fragment was amplified from genomic DNA of Chinese kale, showing more than 88% identity with the known DAD1 nucleotide sequence and no intron. The reverse of the amplified fragment was ligated to the downstream of the CaMV35S promoter in the plant expression vector pBIl21. Antisense expression vector pBII21-DAD1F was constructed with DAD1 fragment of Chinese kale, and was transferred into Agrobacterium tumefaciens, which will be used in the transformation to create male sterile materials of Chinese kale. 展开更多
关键词 Chinese kale Brassica oleracea var. alboglabra DAD1 antisense expression vector.
下载PDF
Construction and Expression of Sugarcane UGPase cDNA Prokaryotic Expression Vector
8
作者 Ling Lian Jianfu Zhang +2 位作者 Bingying Ye Youqiang Chen Rukai Chen 《Journal of Life Sciences》 2011年第12期981-985,共5页
UGPase (UDP-glucose pyrophosphorylase), one of the primary enzymes concerned with carbohydrate metabolism, catalyzes the formation of UDPG. By inserting the UGPase cDNA fragment cloned from Saccharum officinarum int... UGPase (UDP-glucose pyrophosphorylase), one of the primary enzymes concerned with carbohydrate metabolism, catalyzes the formation of UDPG. By inserting the UGPase cDNA fragment cloned from Saccharum officinarum into PQE-30, the prokaryotic expression vector of PQE-UGP was successfully constructed. Then the vector plasmid of PQE-UGP was transformed into host bacteria M 15 and the expression of target gene was induced by Isopropyl β-D-1-Thiogalactopyranoside (IPTG). The research laid foundation for study on the prokaryotic expression of UGPase. 展开更多
关键词 UGPASE construction of prokaryotic expression vector induced expression.
下载PDF
Construction of the human miRNA-451 expression vector and its expression in gastric carcinoma cell line SGC-7901
9
作者 Biao Chen Ximing Xu 《The Chinese-German Journal of Clinical Oncology》 CAS 2013年第8期379-384,共6页
Objective: The aim of the study was to construct miRNA-451 expression vector pLMP-miRNA-451 which could help identify the functions of miRNA-451 in SGC-7901 cell. Methods: Total RNA was extracted from SGC-7901 cells... Objective: The aim of the study was to construct miRNA-451 expression vector pLMP-miRNA-451 which could help identify the functions of miRNA-451 in SGC-7901 cell. Methods: Total RNA was extracted from SGC-7901 cells to synthesized cDNA. The synthesized cDNA encoding pre-miRNA-451 was amplified by polymerase chain reaction (PCR). The PCR product was separated by electrophoresis on 1% agarose gel and then recovered and purified. The purified cDNA fragments of miRNA-451 precursor sequence was then ligated with vector pLMP for 1 h by using DNA ligase to form pLMP- miRNA-451 plasmid. After that, the pLMP-miRNA-451 plasmid was transformed into E. coli DH5a strain expression system to clone and amplificate. The purified pLMP-miRNA-451 extracted from E. coli DH5a via transformation and clone screening was identificatied with restriction enzyme digestion and DNA sequencing. At last, pLMP-miRNA-451 was transfected into SGC-7901 cells with lip2000. Real-time PCR was used for detection of the miRNA-451, the transfection efficiency was ob- served under fluorescence microscopy and cell counting kit-8 assay was conduced to evaluate the effect of miRNA-451 on SGC-7901 cell proliferation. Results: Our results showed that pLMP-miRNA-451 expression vector was not only constructed successfully and effectively infected SGC-7901 cells, but also could repress the SGC-7901 cell proliferation. Conclusion: The constructed plasmid pLMP-miRNA-451 could used for further studies of miRNA-451 in SGC-7901 cell lines. 展开更多
关键词 miRNA-451 SGC-7901 cell construction of pLMP-ha-miRNA-451 transformation and amplification identifica-tion and expression
下载PDF
Assembly of long DNA sequences using a new synthetic Escherichia coli-yeast shuttle vector 被引量:3
10
作者 Zheng Hou Zheng Zhou +1 位作者 Zonglin Wang Gengfu Xiao 《Virologica Sinica》 SCIE CAS CSCD 2016年第2期160-167,共8页
Synthetic biology is a newly developed field of research focused on designing and rebuilding novel biomolecular components, circuits, and networks. Synthetic biology can also help understand biological principles and ... Synthetic biology is a newly developed field of research focused on designing and rebuilding novel biomolecular components, circuits, and networks. Synthetic biology can also help understand biological principles and engineer complex artificial metabolic systems. DNA manipulation on a large genome-wide scale is an inevitable challenge, but a necessary tool for synthetic biology. To improve the methods used for the synthesis of long DNA fragments, here we constructed a novel shuttle vector named p GF(plasmid Genome Fast) for DNA assembly in vivo. The BAC plasmid p CC1 BAC, which can accommodate large DNA molecules, was chosen as the backbone. The sequence of the yeast artificial chromosome(YAC) regulatory element CEN6-ARS4 was synthesized and inserted into the plasmid to enable it to replicate in yeast. The selection sequence HIS3, obtained by polymerase chain reaction(PCR) from the plasmid p BS313, was inserted for screening. This new synthetic shuttle vector can mediate the transformation-associated recombination(TAR) assembly of large DNA fragments in yeast, and the assembled products can be transformed into Escherichia coli for further amplification. We also conducted in vivo DNA assembly using p GF and yeast homologous recombination and constructed a 31-kb long DNA sequence from the cyanophage PP genome. Our findings show that this novel shuttle vector would be a useful tool for efficient genome-scale DNA reconstruction. 展开更多
关键词 yeast plasmid shuttle DNA recombination Genome assembly inserted amplification homologous
原文传递
上一页 1 下一页 到第
使用帮助 返回顶部