Burkholderia mallei is regarded as a potential biological weapon by the Centers for Disease Control and Prevention. In this study, the main factors shaping codon usage in the genome of B. mallei ATCC 23344 were firstl...Burkholderia mallei is regarded as a potential biological weapon by the Centers for Disease Control and Prevention. In this study, the main factors shaping codon usage in the genome of B. mallei ATCC 23344 were firstly reported. The results showed that the primary trend in codon usage variation in the B. mallei is due to translational selection; while compositional mutation bias is relatively the weaker influence and the hydrophobicity of each protein and gene length are only the minor influences. At the same time, 21 codons defined firstly as ＇optimal codons＇ might provide more useful information for the expression of target genes and development of a vaccine to prevent glanders.展开更多
The sixth-order accurate phase error flux-corrected transport numerical algorithm is introduced, and used to simulate Kelvin-Helmholtz instability. Linear growth rates of the simulation agree with the linear theories ...The sixth-order accurate phase error flux-corrected transport numerical algorithm is introduced, and used to simulate Kelvin-Helmholtz instability. Linear growth rates of the simulation agree with the linear theories of Kelvin Helmholtz instability. It indicates the validity and accuracy of this simulation method. The method also has good capturing ability of the instability interface deformation.展开更多
Nathaniel Hawthorne was a famous writer in the period of American Renaissance. His works The scarlet letter can fully embody his mind for writing and artistic characteristics. This paper discusses the viewpoint ＂one ...Nathaniel Hawthorne was a famous writer in the period of American Renaissance. His works The scarlet letter can fully embody his mind for writing and artistic characteristics. This paper discusses the viewpoint ＂one might not be a real sinner if he was a sinner in law; while if one was not a sinner in law, he might be the real sinner.＂展开更多
Networks are a class of general systems represented by becomes a weighted graph visualizing the constraints imposed their UC-structure. Suppressing the nature of elements the network by interconnections rather than th...Networks are a class of general systems represented by becomes a weighted graph visualizing the constraints imposed their UC-structure. Suppressing the nature of elements the network by interconnections rather than the elements themselves. These constraints follow generalized Kirchhoff＇s laws derived from physical constraints. Once we have a graph; then the working environment becomes the graph-theory. An algorithm derived from graph theory is developed within the paper in order to analyze general networks. The algorithm is based on computing all the spanning trees in the graph G with an associated weight. This weight is the product ofadmittance＇s of the edges forming the spanning tree. In the first phase this algorithm computes a depth first spanning tree together with its cotree. Both are used as parents for controlled generation of off-springs. The control is represented in selecting the off-springs that were not generated previously. While the generation of off-springs, is based on replacement of one or more tree edges by cycle edges corresponding to cotree edges. The algorithm can generate a frequency domain analysis of the network.展开更多
We present an investigation into the use of pan tilt zoom camera and sonar sensors for simuhaneous localization and mapping with artificial colored landmarks. An improved particle filter is applied to estimate a poste...We present an investigation into the use of pan tilt zoom camera and sonar sensors for simuhaneous localization and mapping with artificial colored landmarks. An improved particle filter is applied to estimate a posterior of the pose of the robot, in which each particle has associated it with an entire map. The distributions of landmarks are also represented by particle sets, where separate particles are used to represent the robot and the landmarks. Hough transform is used to extract line segments from sonar observations and build map simultaneously. The key advantage of our method is that the full posterior over robot poses and landmarks can be nonlinearly approximated at every point in time by particles. Especially the landmarks are affixed on the moving robots, which can reduce the impact of the depletion problem and the impoverishment problem produced by basic particle filter. Experimental results show that this approach has advantages over the basic particle filter and the extended Kalman filter.展开更多
The Falkner-Skan boundary layer steady flow over a fiat stretching sheet is investigated in this paper. The mathematical model consists of continuity and the momentum equations, while a new model is proposed for MHD F...The Falkner-Skan boundary layer steady flow over a fiat stretching sheet is investigated in this paper. The mathematical model consists of continuity and the momentum equations, while a new model is proposed for MHD Finitely Extensible Nonlinear Elastic Peterlin （FENE-P） fluid. The effects of Hall current with the variation of intensity of non-zero pressure gradient are taken into account. The governing partial differential equations are first transformed to ordinary differential equations using appropriate similarity transformation and then solved by Adomian decomposition method （ADM）. The obtained results are validated by generalized collocation method （GCM） and found to be in good agreement. Effects of pertinent parameters are discussed through graphs and tables. Comparison with the existing studies is made as a limiting case of the considered problem at the end.展开更多
文摘Burkholderia mallei is regarded as a potential biological weapon by the Centers for Disease Control and Prevention. In this study, the main factors shaping codon usage in the genome of B. mallei ATCC 23344 were firstly reported. The results showed that the primary trend in codon usage variation in the B. mallei is due to translational selection; while compositional mutation bias is relatively the weaker influence and the hydrophobicity of each protein and gene length are only the minor influences. At the same time, 21 codons defined firstly as ＇optimal codons＇ might provide more useful information for the expression of target genes and development of a vaccine to prevent glanders.
基金supported by the National Basic Research Program(973 Program)under Grant No.2007CB815100the Research Fund for the Doctoral Program of Higher Education of China under Grant No.20070290008
文摘The sixth-order accurate phase error flux-corrected transport numerical algorithm is introduced, and used to simulate Kelvin-Helmholtz instability. Linear growth rates of the simulation agree with the linear theories of Kelvin Helmholtz instability. It indicates the validity and accuracy of this simulation method. The method also has good capturing ability of the instability interface deformation.
文摘Nathaniel Hawthorne was a famous writer in the period of American Renaissance. His works The scarlet letter can fully embody his mind for writing and artistic characteristics. This paper discusses the viewpoint ＂one might not be a real sinner if he was a sinner in law; while if one was not a sinner in law, he might be the real sinner.＂
文摘Networks are a class of general systems represented by becomes a weighted graph visualizing the constraints imposed their UC-structure. Suppressing the nature of elements the network by interconnections rather than the elements themselves. These constraints follow generalized Kirchhoff＇s laws derived from physical constraints. Once we have a graph; then the working environment becomes the graph-theory. An algorithm derived from graph theory is developed within the paper in order to analyze general networks. The algorithm is based on computing all the spanning trees in the graph G with an associated weight. This weight is the product ofadmittance＇s of the edges forming the spanning tree. In the first phase this algorithm computes a depth first spanning tree together with its cotree. Both are used as parents for controlled generation of off-springs. The control is represented in selecting the off-springs that were not generated previously. While the generation of off-springs, is based on replacement of one or more tree edges by cycle edges corresponding to cotree edges. The algorithm can generate a frequency domain analysis of the network.
文摘We present an investigation into the use of pan tilt zoom camera and sonar sensors for simuhaneous localization and mapping with artificial colored landmarks. An improved particle filter is applied to estimate a posterior of the pose of the robot, in which each particle has associated it with an entire map. The distributions of landmarks are also represented by particle sets, where separate particles are used to represent the robot and the landmarks. Hough transform is used to extract line segments from sonar observations and build map simultaneously. The key advantage of our method is that the full posterior over robot poses and landmarks can be nonlinearly approximated at every point in time by particles. Especially the landmarks are affixed on the moving robots, which can reduce the impact of the depletion problem and the impoverishment problem produced by basic particle filter. Experimental results show that this approach has advantages over the basic particle filter and the extended Kalman filter.
文摘The Falkner-Skan boundary layer steady flow over a fiat stretching sheet is investigated in this paper. The mathematical model consists of continuity and the momentum equations, while a new model is proposed for MHD Finitely Extensible Nonlinear Elastic Peterlin （FENE-P） fluid. The effects of Hall current with the variation of intensity of non-zero pressure gradient are taken into account. The governing partial differential equations are first transformed to ordinary differential equations using appropriate similarity transformation and then solved by Adomian decomposition method （ADM）. The obtained results are validated by generalized collocation method （GCM） and found to be in good agreement. Effects of pertinent parameters are discussed through graphs and tables. Comparison with the existing studies is made as a limiting case of the considered problem at the end.
