Flume experiments and numerical simulation were conducted to characterize the hydrodynamics of a trapezoid artificial reef.Measurements in particle image velocimetry were conducted to observe the formation of upwellin...Flume experiments and numerical simulation were conducted to characterize the hydrodynamics of a trapezoid artificial reef.Measurements in particle image velocimetry were conducted to observe the formation of upwelling and vortices;and forces for the reef model were measured by load cell.The results of flume experiments agree well with the numerical data.In addition,the flow structure around a reef combining trapezoidal and cubic blocks was simulated numerically under two deployment schemes,showing a more complicated flow structure than that of a stand-alone reef.Relationship between drag coefficient and Reynolds number suggest that the degree of turbulence can be assessed from the value of drag coefficient downstream from the reef.The role of the reef in water flow is to reduce flow velocity and generate turbulence.展开更多
Upon nitrogen step-down, Anabaena sp. PCC 7120 produces semi-regularly spaced heterocysts along filaments. HetR, the master regulator of heterocyst differenti- ation, has been shown to up-regulate hetP and hetZ in dif...Upon nitrogen step-down, Anabaena sp. PCC 7120 produces semi-regularly spaced heterocysts along filaments. HetR, the master regulator of heterocyst differenti- ation, has been shown to up-regulate hetP and hetZ in differentiating heterocysts via specific recognition sites. HetR is also predicted to bind to the promoter of patA, a gene required for heterocyst formation at intercalary positions. Here, we show that HetR binds to the predicted site 5′ from patA. Moreover, （1） deletion of the HetR-binding site greatly diminished the expression ofpatA in vegetative cells as shown with gfp, and （2） complementation of a patA mutant by a replicating plasmid that bears patA is largely prevented by removal of that binding site. In contrast, HetR- binding sites suppressed the expression of alr0202 （a homolog of hetZ） specifically in heterocysts and of alr3234 （a homolog of hetP） in whole filaments. Our results indicate that HetR can regulate gene expression in different modes.展开更多
Currently, the integrated biomechanical studies on fish locomotion come into focus, so it is urgent to provide reliable and sys- tematic experimental results, and to establish a biomechanical ＂digital fish＂ database...Currently, the integrated biomechanical studies on fish locomotion come into focus, so it is urgent to provide reliable and sys- tematic experimental results, and to establish a biomechanical ＂digital fish＂ database for some typical fish species. Accord- ingly, based on the control framework of ＂Neural Control - Active Contraction of Muscle - Passive Deformation＂, the elec- tromyography （EMG） signals, the mechanical properties and the constitutive relationship of skin, muscle, and body trunk, as well as morphological parameters of crucian carp, are investigated with experiments, from which a simplified database of bio- mechanical ＂digital fish＂ is established. First, the EMG signals from three lateral superficial red muscles of crucian carp, which was evolving in the C-start movement, were acquired with a self-designing amplifier. The modes of muscle activity were also investigated. Secondly, the Young＇s modulus and the reduced relaxation function of crucian carp＇s skin and muscle were de- termined by failure tests and relaxation tests in uniaxial tensile ways, respectively. Viscoelastic models were adopted to deduce the constitutive relationship. The mechanical properties and the angular stiffness of different sites on the crucian carp＇s body trunk were obtained with dynamic bending experiments, where a self-designing dynamic bending test machine was employed. The conclusion was drawn regarding the body trunk of crucian carp under dynamic bending deformation as an approximate elastomer. According to the above experimental results, a possible benefit of body effective stiffness increasing with a little energy dissipation was discussed. Thirdly, the distribution of geometric parameters and weight parameters for a single experi- mental individual and multiple individuals of crucian carp was studied with experiments. Finally, considering all the above re- suits, generic experimental data were obtained by normalization, and a preliminary biomechanical ＂digital fish＂ database for crucian carp was established.展开更多
基金Supported by the National Natural Science Foundation of China(Nos.31072246,31272703)
文摘Flume experiments and numerical simulation were conducted to characterize the hydrodynamics of a trapezoid artificial reef.Measurements in particle image velocimetry were conducted to observe the formation of upwelling and vortices;and forces for the reef model were measured by load cell.The results of flume experiments agree well with the numerical data.In addition,the flow structure around a reef combining trapezoidal and cubic blocks was simulated numerically under two deployment schemes,showing a more complicated flow structure than that of a stand-alone reef.Relationship between drag coefficient and Reynolds number suggest that the degree of turbulence can be assessed from the value of drag coefficient downstream from the reef.The role of the reef in water flow is to reduce flow velocity and generate turbulence.
基金supported by the National Natural Science Foundation of China(31270132)
文摘Upon nitrogen step-down, Anabaena sp. PCC 7120 produces semi-regularly spaced heterocysts along filaments. HetR, the master regulator of heterocyst differenti- ation, has been shown to up-regulate hetP and hetZ in differentiating heterocysts via specific recognition sites. HetR is also predicted to bind to the promoter of patA, a gene required for heterocyst formation at intercalary positions. Here, we show that HetR binds to the predicted site 5′ from patA. Moreover, （1） deletion of the HetR-binding site greatly diminished the expression ofpatA in vegetative cells as shown with gfp, and （2） complementation of a patA mutant by a replicating plasmid that bears patA is largely prevented by removal of that binding site. In contrast, HetR- binding sites suppressed the expression of alr0202 （a homolog of hetZ） specifically in heterocysts and of alr3234 （a homolog of hetP） in whole filaments. Our results indicate that HetR can regulate gene expression in different modes.
基金supported by the National Natural Science Foundation of China (Grant No. 10832010)the Knowledge Innovation Project of the Chinese Academy of Sciences (Grant No. KJCX2-YW-L05)
文摘Currently, the integrated biomechanical studies on fish locomotion come into focus, so it is urgent to provide reliable and sys- tematic experimental results, and to establish a biomechanical ＂digital fish＂ database for some typical fish species. Accord- ingly, based on the control framework of ＂Neural Control - Active Contraction of Muscle - Passive Deformation＂, the elec- tromyography （EMG） signals, the mechanical properties and the constitutive relationship of skin, muscle, and body trunk, as well as morphological parameters of crucian carp, are investigated with experiments, from which a simplified database of bio- mechanical ＂digital fish＂ is established. First, the EMG signals from three lateral superficial red muscles of crucian carp, which was evolving in the C-start movement, were acquired with a self-designing amplifier. The modes of muscle activity were also investigated. Secondly, the Young＇s modulus and the reduced relaxation function of crucian carp＇s skin and muscle were de- termined by failure tests and relaxation tests in uniaxial tensile ways, respectively. Viscoelastic models were adopted to deduce the constitutive relationship. The mechanical properties and the angular stiffness of different sites on the crucian carp＇s body trunk were obtained with dynamic bending experiments, where a self-designing dynamic bending test machine was employed. The conclusion was drawn regarding the body trunk of crucian carp under dynamic bending deformation as an approximate elastomer. According to the above experimental results, a possible benefit of body effective stiffness increasing with a little energy dissipation was discussed. Thirdly, the distribution of geometric parameters and weight parameters for a single experi- mental individual and multiple individuals of crucian carp was studied with experiments. Finally, considering all the above re- suits, generic experimental data were obtained by normalization, and a preliminary biomechanical ＂digital fish＂ database for crucian carp was established.
