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杜氏盐藻2种碳酸酐酶基因5’上游的克隆与序列分析 被引量:7
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作者 吕玉民 姜国忠 +3 位作者 牛向丽 谢华 张贵星 薛乐勋 《郑州大学学报(医学版)》 CAS 北大核心 2004年第1期1-6,共6页
目的 :克隆盐藻 2种碳酸酐酶基因 (DCA1、CA1 ) 5’上游区序列 ,并对其进行测序和序列分析。方法 :利用DraⅠ、EcoRV、PvuⅡ和StuⅠ 4种平端限制内切酶分别酶切盐藻基因组DNA ,并与衔接头连接 ,构建成盐藻步行基因组文库GWL1、GWL2、GWL... 目的 :克隆盐藻 2种碳酸酐酶基因 (DCA1、CA1 ) 5’上游区序列 ,并对其进行测序和序列分析。方法 :利用DraⅠ、EcoRV、PvuⅡ和StuⅠ 4种平端限制内切酶分别酶切盐藻基因组DNA ,并与衔接头连接 ,构建成盐藻步行基因组文库GWL1、GWL2、GWL3和GWL4 ;巢式PCR方法从盐藻步行基因组文库中扩增DCA1和CA1基因 5’上游区序列 ,双脱氧末端终止法测序。结果 :DCA1基因 ,在GWL1、GWL3中分别扩增出约 1 .3kb和 4 .5kb的特异带 ,而CA1基因 ,则在GWL2、GWL4中分别扩增出 1 .7kb和 2 .5kb的特异带 ;序列分析结果表明 ,所得序列的 3’端与已知DCA1、CA1基因cDNA 5’端序列完全一致。该 2序列均有多个与转录调控有关的保守序列 (如TATA -box、CAAT -box)和富含GT的重复序列等许多相似之处。结论 :采用基因组步行方法从已知cDNA周围未知启动子或其他调控区域中克隆得到的DCA1、CA1基因的 5’上游区序列 ,可能是 展开更多
关键词 杜氏盐藻 碳酸酐酶 5’-上游区
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Identification of an kB-like motif at the 5' upstream region of human lymphotoxin gene
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作者 XURENER SHOUYUANZHAO 《Cell Research》 SCIE CAS CSCD 1994年第1期1-7,共7页
Lymphotoxin(LT) is a glycoprotein secreted by activated T cell. The expression of LT gene is mainly regulated at the level of transcription. By using human LT DNA as a probe, we carried out a RNA dot blotting test and... Lymphotoxin(LT) is a glycoprotein secreted by activated T cell. The expression of LT gene is mainly regulated at the level of transcription. By using human LT DNA as a probe, we carried out a RNA dot blotting test and found that the longer the time of Jurkat human Tlymphoma cells exposed to the PMA and PHA, the more endogenous LT mRNA could be produced. Results of gel retardation assay showed that the nuclear extract from Jurkat cells treated with PMA and PHA formed different DNA-protein complexes. Changes in complex patterns were observed at various time intervals of PMA and PHA induction. A specific protein-binding site was mapped out to be a 22-bp sequence at the 5’upstream regioll of human LT gene by DNase I footprinting analysis. This region was similar to the sequence recognized by the proteins of NFkB family The results of fragment competition and homology analysis indicated that the 22-bp sequence contains a kB-like motif only which is located at the base pairs -100 to -90 (5’-GGGGGCTTCCC-3’). Thus, the NF-kBlike factors were involved in the protein-DNA interaction.Furthermore, there were more than one retarded bands appearing in the gel retardation assay. It suggested that there may be several NF-kB-like factors involved in theregulation of LT gene transcription at the same site. 展开更多
关键词 human LT gene protein-DNA interaction transcription regulation
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玉米黑粉菌cyp51基因上游调控区克隆及生物信息学分析 被引量:1
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作者 黎晨 张华 +3 位作者 韩睿 袁永泽 杨江科 刘德立 《植物保护学报》 CAS CSCD 北大核心 2009年第6期517-521,共5页
为探明玉米黑粉菌cyp51基因的表达调控机制,根据玉米黑粉菌cyp51基因cDNA的5′-序列,采用染色体步移技术,获得其5′-上游调控区序列,总长为490bp。利用NNPP分析软件预测转录起始位点,并采用TFSEARCH1.3软件分析转录因子结合位点。结果显... 为探明玉米黑粉菌cyp51基因的表达调控机制,根据玉米黑粉菌cyp51基因cDNA的5′-序列,采用染色体步移技术,获得其5′-上游调控区序列,总长为490bp。利用NNPP分析软件预测转录起始位点,并采用TFSEARCH1.3软件分析转录因子结合位点。结果显示:转录起始位点位于上游134bp处;上游调控区不仅包含启动子的核心结构序列TATA盒(分别位于-30、-58、-318和-348bp处)和CAAT盒(分别位于-150、-161和-191bp处),亦包含多个转录因子结合位点,如AP-4、GATA-1、CdxA、Dfd和Oct-1等;在上游调控序列中嘌呤含量高,而且从-222bp处开始存在4个连续高嘌呤含量的热激转录因子特异性结合位点(HSE)。 展开更多
关键词 玉米黑粉菌 cyp51 染色体步移技术 5’-上游调控序列
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