Basing on a lot of examinations, according to the fundamental inage processing theories and methods, getting touch with the property of wood anatomical structure image,we put forward the optimum method and theory whic...Basing on a lot of examinations, according to the fundamental inage processing theories and methods, getting touch with the property of wood anatomical structure image,we put forward the optimum method and theory which are suitable for the binary processing of the wood anatomical structure image. After the wood image has been processed binary, with the help of computer vision technology, the boundary of wood anatomical structure molecular binary image was sought This kind of theory and method lay a solid foundaion on the collection of feature and the pottern recognition and other high level processing of wood anatomical structure molecular image.展开更多
Using a total of 297 segmented sections,we reconstructed the three-dimensional(3D) structure of pure iron and obtained the largest dataset of 16254 3D complete grains reported to date.The mean values of equivalent sph...Using a total of 297 segmented sections,we reconstructed the three-dimensional(3D) structure of pure iron and obtained the largest dataset of 16254 3D complete grains reported to date.The mean values of equivalent sphere radius and face number of pure iron were observed to be consistent with those of Monte Carlo simulated grains,phase-field simulated grains,Ti-alloy grains,and Ni-based super alloy grains.In this work,by finding a balance between automatic methods and manual refinement,we developed an interactive segmentation method to segment serial sections accurately in the reconstruction of the 3D microstructure;this approach can save time as well as substantially eliminate errors.The segmentation process comprises four operations:image preprocessing,breakpoint detection based on mathematical morphology analysis,optimized automatic connection of the breakpoints,and manual refinement by artificial evaluation.展开更多
Structured illumination microscopy(SIM)is a rapidly developing super-resolution technology.It has been widely used in various application fields of biomedicine due to its excellent two-and three-dimensional imaging ca...Structured illumination microscopy(SIM)is a rapidly developing super-resolution technology.It has been widely used in various application fields of biomedicine due to its excellent two-and three-dimensional imaging capabilities.Furthermore,faster three-dimensional imaging methods are required to help enable more research-oriented living cell imaging.In this paper,a fast and sensitive three-dimensional structured illumination microscopy based on asymmetric three-beam interference is proposed.An innovative time-series acquisition method is employed to halve the time required to obtain each raw image.A segmented half-wave plate as a substantial linear polarization modulation method is applied to the three-dimensional SIM system for the first time.Although it needs to acquire 21 raw images instead of 15 to reconstruct one super-resolution image,the SIM setup proposed in this paper is 30%faster than the traditional spatial light modulator-SIM(SLM-SIM)in imaging each super-resolution image.The related theoretical derivation,hardware system,and verification experiment are elaborated in this paper.The stable and fast 3D super-resolution imaging method proposed in this paper is of great significance to the research of organelle interaction,intercellular communication,and other biomedical fields.展开更多
Brain plasticity, including anatomical changes and functional reorganization, is the physiological basis of functional recovery after spinal cord injury（SCI）. The correlation between brain anatomical changes and fun...Brain plasticity, including anatomical changes and functional reorganization, is the physiological basis of functional recovery after spinal cord injury（SCI）. The correlation between brain anatomical changes and functional reorganization after SCI is unclear. This study aimed to explore whether alterations of cortical structure and network function are concomitant in sensorimotor areas after incomplete SCI. Eighteen patients with incomplete SCI（mean age 40.94 ± 14.10 years old; male：female, 7：11） and 18 healthy subjects（37.33 ± 11.79 years old; male：female, 7：11） were studied by resting state functional magnetic resonance imaging. Gray matter volume（GMV） and functional connectivity were used to evaluate cortical structure and network function, respectively. There was no significant alteration of GMV in sensorimotor areas in patients with incomplete SCI compared with healthy subjects. Intra-hemispheric functional connectivity between left primary somatosensory cortex（BA1） and left primary motor cortex（BA4）, and left BA1 and left somatosensory association cortex（BA5） was decreased, as well as inter-hemispheric functional connectivity between left BA1 and right BA4, left BA1 and right BA5, and left BA4 and right BA5 in patients with SCI. Functional connectivity between both BA4 areas was also decreased. The decreased functional connectivity between the left BA1 and the right BA4 positively correlated with American Spinal Injury Association sensory score in SCI patients. The results indicate that alterations of cortical anatomical structure and network functional connectivity in sensorimotor areas were non-concomitant in patients with incomplete SCI, indicating the network functional changes in sensorimotor areas may not be dependent on anatomic structure. The strength of functional connectivity within sensorimotor areas could serve as a potential imaging biomarker for assessment and prediction of sensory function in patients with incomplete SCI. This trial was registered with the Chinese Clinical Trial Registry（registration number： Chi CTR-ROC-17013566）.展开更多
目的基于3.0 T磁共振成像(MRI)技术,活体观察WHBE兔脑部形态解剖结构,累积WHBE兔脑的影像学基本生物学数据,为进一步拓宽WHBE兔的应用提供背景资料。方法成年雄性WHBE兔9只,用3%戊巴比妥钠溶液静脉注射麻醉,行3.0 T MRI加兔脑专用线圈...目的基于3.0 T磁共振成像(MRI)技术,活体观察WHBE兔脑部形态解剖结构,累积WHBE兔脑的影像学基本生物学数据,为进一步拓宽WHBE兔的应用提供背景资料。方法成年雄性WHBE兔9只,用3%戊巴比妥钠溶液静脉注射麻醉,行3.0 T MRI加兔脑专用线圈常规横断面和矢状面扫描,并测量分析脑部的各种结构大小。结果 MRI扫描可成功获得活体WHBE兔脑矢状面和横断面T2WI或T1WI图像,可完整清晰地观察到活体WHBE兔的嗅球、大脑、小脑和垂体等基本结构,并发现了4只兔脑T2WI中左右两侧颞叶海马区高信号,相应区域在T1WI出现低信号外,其余均无异常。同时,获得了额叶、海马、大脑、侧脑室、垂体等相关解剖结构的参考值。结论采用3.0 T磁共振成像系统加上兔脑专用线圈,可以清晰地观察到WHBE兔脑部的各种形态解剖结构,并初步建立了WBHE兔脑影像学基本数据。展开更多
Alzheimer’s disease is a primary age-related neurodegenerative disorder that can result in impaired cognitive and memory functions.Although connections between changes in brain networks of Alzheimer’s disease patien...Alzheimer’s disease is a primary age-related neurodegenerative disorder that can result in impaired cognitive and memory functions.Although connections between changes in brain networks of Alzheimer’s disease patients have been established,the mechanisms that drive these alterations remain incompletely understood.This study,which was conducted in 2018 at Northeastern University in China,included data from 97 participants of the Alzheimer’s Disease Neuroimaging Initiative(ADNI)dataset covering genetics,imaging,and clinical data.All participants were divided into two groups:normal control(n=52;20 males and 32 females;mean age 73.90±4.72 years)and Alzheimer’s disease(n=45,23 males and 22 females;mean age 74.85±5.66).To uncover the wiring mechanisms that shaped changes in the topology of human brain networks of Alzheimer’s disease patients,we proposed a local naive Bayes brain network model based on graph theory.Our results showed that the proposed model provided an excellent fit to observe networks in all properties examined,including clustering coefficient,modularity,characteristic path length,network efficiency,betweenness,and degree distribution compared with empirical methods.This proposed model simulated the wiring changes in human brain networks between controls and Alzheimer’s disease patients.Our results demonstrate its utility in understanding relationships between brain tissue structure and cognitive or behavioral functions.The ADNI was performed in accordance with the Good Clinical Practice guidelines,US 21 CFR Part 50-Protection of Human Subjects,and Part 56-Institutional Review Boards(IRBs)/Research Good Clinical Practice guidelines Institutional Review Boards(IRBs)/Research Ethics Boards(REBs).展开更多
文摘Basing on a lot of examinations, according to the fundamental inage processing theories and methods, getting touch with the property of wood anatomical structure image,we put forward the optimum method and theory which are suitable for the binary processing of the wood anatomical structure image. After the wood image has been processed binary, with the help of computer vision technology, the boundary of wood anatomical structure molecular binary image was sought This kind of theory and method lay a solid foundaion on the collection of feature and the pottern recognition and other high level processing of wood anatomical structure molecular image.
基金financial support from the National Natural Science Foundation of China(Nos.51371030 and 51571020)the National Key Research and Development Program of China(No.2016YFB0700505)the National High Technology Research and Development Program of China(No.2015AA034201)
文摘Using a total of 297 segmented sections,we reconstructed the three-dimensional(3D) structure of pure iron and obtained the largest dataset of 16254 3D complete grains reported to date.The mean values of equivalent sphere radius and face number of pure iron were observed to be consistent with those of Monte Carlo simulated grains,phase-field simulated grains,Ti-alloy grains,and Ni-based super alloy grains.In this work,by finding a balance between automatic methods and manual refinement,we developed an interactive segmentation method to segment serial sections accurately in the reconstruction of the 3D microstructure;this approach can save time as well as substantially eliminate errors.The segmentation process comprises four operations:image preprocessing,breakpoint detection based on mathematical morphology analysis,optimized automatic connection of the breakpoints,and manual refinement by artificial evaluation.
基金This work was funded by The National Key R&D Program of China(2016YFF0102000)Scientific Research and Equipment Development Project of CAS(YJKYYQ20180032 and YJKYYQ20190048)Major Innovative Research Team of Suzhou(ZXT2019007).
文摘Structured illumination microscopy(SIM)is a rapidly developing super-resolution technology.It has been widely used in various application fields of biomedicine due to its excellent two-and three-dimensional imaging capabilities.Furthermore,faster three-dimensional imaging methods are required to help enable more research-oriented living cell imaging.In this paper,a fast and sensitive three-dimensional structured illumination microscopy based on asymmetric three-beam interference is proposed.An innovative time-series acquisition method is employed to halve the time required to obtain each raw image.A segmented half-wave plate as a substantial linear polarization modulation method is applied to the three-dimensional SIM system for the first time.Although it needs to acquire 21 raw images instead of 15 to reconstruct one super-resolution image,the SIM setup proposed in this paper is 30%faster than the traditional spatial light modulator-SIM(SLM-SIM)in imaging each super-resolution image.The related theoretical derivation,hardware system,and verification experiment are elaborated in this paper.The stable and fast 3D super-resolution imaging method proposed in this paper is of great significance to the research of organelle interaction,intercellular communication,and other biomedical fields.
基金supported by a grant from Tsinghua University Initiative Scientific Research Program,No.2014081266,20131089382the National Natural Science Foundation of China,No.61171002,60372023
文摘Brain plasticity, including anatomical changes and functional reorganization, is the physiological basis of functional recovery after spinal cord injury（SCI）. The correlation between brain anatomical changes and functional reorganization after SCI is unclear. This study aimed to explore whether alterations of cortical structure and network function are concomitant in sensorimotor areas after incomplete SCI. Eighteen patients with incomplete SCI（mean age 40.94 ± 14.10 years old; male：female, 7：11） and 18 healthy subjects（37.33 ± 11.79 years old; male：female, 7：11） were studied by resting state functional magnetic resonance imaging. Gray matter volume（GMV） and functional connectivity were used to evaluate cortical structure and network function, respectively. There was no significant alteration of GMV in sensorimotor areas in patients with incomplete SCI compared with healthy subjects. Intra-hemispheric functional connectivity between left primary somatosensory cortex（BA1） and left primary motor cortex（BA4）, and left BA1 and left somatosensory association cortex（BA5） was decreased, as well as inter-hemispheric functional connectivity between left BA1 and right BA4, left BA1 and right BA5, and left BA4 and right BA5 in patients with SCI. Functional connectivity between both BA4 areas was also decreased. The decreased functional connectivity between the left BA1 and the right BA4 positively correlated with American Spinal Injury Association sensory score in SCI patients. The results indicate that alterations of cortical anatomical structure and network functional connectivity in sensorimotor areas were non-concomitant in patients with incomplete SCI, indicating the network functional changes in sensorimotor areas may not be dependent on anatomic structure. The strength of functional connectivity within sensorimotor areas could serve as a potential imaging biomarker for assessment and prediction of sensory function in patients with incomplete SCI. This trial was registered with the Chinese Clinical Trial Registry（registration number： Chi CTR-ROC-17013566）.
基金Fundamental Research Funds for the Central Universities in China,No.N161608001 and No.N171903002
文摘Alzheimer’s disease is a primary age-related neurodegenerative disorder that can result in impaired cognitive and memory functions.Although connections between changes in brain networks of Alzheimer’s disease patients have been established,the mechanisms that drive these alterations remain incompletely understood.This study,which was conducted in 2018 at Northeastern University in China,included data from 97 participants of the Alzheimer’s Disease Neuroimaging Initiative(ADNI)dataset covering genetics,imaging,and clinical data.All participants were divided into two groups:normal control(n=52;20 males and 32 females;mean age 73.90±4.72 years)and Alzheimer’s disease(n=45,23 males and 22 females;mean age 74.85±5.66).To uncover the wiring mechanisms that shaped changes in the topology of human brain networks of Alzheimer’s disease patients,we proposed a local naive Bayes brain network model based on graph theory.Our results showed that the proposed model provided an excellent fit to observe networks in all properties examined,including clustering coefficient,modularity,characteristic path length,network efficiency,betweenness,and degree distribution compared with empirical methods.This proposed model simulated the wiring changes in human brain networks between controls and Alzheimer’s disease patients.Our results demonstrate its utility in understanding relationships between brain tissue structure and cognitive or behavioral functions.The ADNI was performed in accordance with the Good Clinical Practice guidelines,US 21 CFR Part 50-Protection of Human Subjects,and Part 56-Institutional Review Boards(IRBs)/Research Good Clinical Practice guidelines Institutional Review Boards(IRBs)/Research Ethics Boards(REBs).
