Objective To investigate the frequency of t(14; 18) in different subtypes of B-cell lymphomas and the ability or the polymerase chain reaction(PCR) to detect this rearrangement in frozen samples. Methods 1o7 cases of ...Objective To investigate the frequency of t(14; 18) in different subtypes of B-cell lymphomas and the ability or the polymerase chain reaction(PCR) to detect this rearrangement in frozen samples. Methods 1o7 cases of B-cell lymphomas were studied uslng DNA extracted from rresh-frozen tissues. The DNA samples were amplified by PCR for bcl-2 MBR/JH. The products of bcl-2/JH rearrangement were hybridized with an internal olignucleotide probe or bcl-2 MBR. Results The rearranged bcl-2MBR/JH gene was detected in 13 of the 25(52. o% ) follicular center lymphomas, according to REAL classification: 8 of 11 (72. 7%) grade 1, 2 of 5(40. 0%) grade I, and 3 of 90 (33. 3%) grade, 17 of 82(2o. 8%) cases or difruse large B-cell lymphomas were found to have detectable bel-2 MBR/J. rearrangement- Conclusion The rrequency or bcl-2 MBR/JH rearrangement in diffuse large B-cell lymphomas is significantly lower than those in follicular center lympkomas(X2= 9. 28, P <o. oo5), suggesting that bcl2/JH rearrangements occur mainly in follicular center lymphomas. in addition, the result of reconstruction experiments suggest that amplification or bcl-2 MBR/JH rearrangements by PCR is both sensitive and specific for detection of t (14; 18 ) translocation.展开更多
BTG1 （B-cell Translocation Gene 1） , a member of the BTG / TOB （Transducer of ErbB-2） family of anti-proliferation factors,has been proven to have an unfavorable effect on muscle fiber growth in several species. T...BTG1 （B-cell Translocation Gene 1） , a member of the BTG / TOB （Transducer of ErbB-2） family of anti-proliferation factors,has been proven to have an unfavorable effect on muscle fiber growth in several species. The porcine BTG1 gene was cloned and its 5＇ flanking promoter region sequence, and characterized the expression patterns in different tissues of adult pigs and in fetal skeletal muscle at different developmental stages in two breeds. The tissue distribution pattern analyses revealed that the mRNA of porcine BTG1 was ubiquitously expressed in the six tissues of both Landrace and Tongcheng pigs. Real-time quantitative reverse transcriptase-PCR results showed that BTG1 mRNA expression levels were significantly different among the three fetal ages in Tongcheng pigs,while no significant differences were found among the three ages in Landrace pigs. Furthermore,the expression of BTG1 in Landrace pigs was significantly lower than in Tongcheng pigs at all three ages. The temporal expression profiles of the BTG1 gene in mouse myoblast C 2 C 12 cells were shown to be consistent with those of the myogenin gene. A single nucleotide polymorphism （SNP） ,g. 281C 〉 T,was identified in the 3＇UTR and allele frequencies were detected in seven pig breed populations. Significant associations were found between the g. 281C 〉 T polymorphism and growth and meat quality traits. Our results indicate that the porcine BTG1 gene could play a potential role in markerassisted selection and as such may be a gene of economic importance.展开更多
Background:Epigenetic alterations have been shown to contribute immensely to human carcinogenesis.Dynamic and reversible N6-methyladenosine(m6A)RNA modification regulates gene expression and cell fate.However,the reas...Background:Epigenetic alterations have been shown to contribute immensely to human carcinogenesis.Dynamic and reversible N6-methyladenosine(m6A)RNA modification regulates gene expression and cell fate.However,the reasons for activation of KIAA1429(also known as VIRMA,an RNA methyltransferase)and its underlying mechanism in lung adenocarcinoma(LUAD)remain largely unexplored.In this study,we aimed to clarify the oncogenic role of KIAA1429 in the tumorigenesis of LUAD.Methods:Whole-genome sequencing and transcriptome sequencing of LUAD data were used to analyze the gene amplification of RNA methyltransferase.The in vitro and in vivo functions of KIAA1429 were investigated.Transcriptome sequencing,methylated RNA immunoprecipitation sequencing(MeRIP-seq),m6A dot blot assays and RNA immunoprecipitation(RIP)were performed to confirm the modified gene mediated by KIAA1429.RNA stability assays were used to detect the half-life of the target gene.Results:Copy number amplification drove higher expression of KIAA1429 in LUAD,whichwas correlatedwith poor overall survival.Manipulating the expression of KIAA1429 could regulate the proliferation and metastasis of LUAD.Mechanistically,the target genes of KIAA1429-mediated m6A modification were confirmed by transcriptome sequencing and MeRIP-seq assays.We also revealed that KIAA1429 could regulate BTG2 expression in an m6A-dependent manner.Knockdown of KIAA1429 significantly decreased the m6A levels of BTG2 mRNA,leading to enhanced YTH m6A RNA binding protein 2(YTHDF2,the m6A“reader”)-dependent BTG2 mRNA stability and promoted the expression of BTG2;thus,participating in the tumorigenesis of LUAD.Conclusions:Our data revealed the activation mechanism and important role of KIAA1429 in LUAD tumorigenesis,which may provide a novel view on the targeted molecular therapy of LUAD.展开更多
文摘Objective To investigate the frequency of t(14; 18) in different subtypes of B-cell lymphomas and the ability or the polymerase chain reaction(PCR) to detect this rearrangement in frozen samples. Methods 1o7 cases of B-cell lymphomas were studied uslng DNA extracted from rresh-frozen tissues. The DNA samples were amplified by PCR for bcl-2 MBR/JH. The products of bcl-2/JH rearrangement were hybridized with an internal olignucleotide probe or bcl-2 MBR. Results The rearranged bcl-2MBR/JH gene was detected in 13 of the 25(52. o% ) follicular center lymphomas, according to REAL classification: 8 of 11 (72. 7%) grade 1, 2 of 5(40. 0%) grade I, and 3 of 90 (33. 3%) grade, 17 of 82(2o. 8%) cases or difruse large B-cell lymphomas were found to have detectable bel-2 MBR/J. rearrangement- Conclusion The rrequency or bcl-2 MBR/JH rearrangement in diffuse large B-cell lymphomas is significantly lower than those in follicular center lympkomas(X2= 9. 28, P <o. oo5), suggesting that bcl2/JH rearrangements occur mainly in follicular center lymphomas. in addition, the result of reconstruction experiments suggest that amplification or bcl-2 MBR/JH rearrangements by PCR is both sensitive and specific for detection of t (14; 18 ) translocation.
文摘目的:探讨幽门螺旋杆菌细胞毒素相关基因A(cytotoxin associated gene A,CagA)与胃黏膜中TET2(ten-eleventranslocation 2)蛋白表达的关系,以及TET2在CagA致癌过程中可能的作用。方法:Real-time PCR检测人胃黏膜上皮细胞株GES-1和胃癌细胞株MGC-803中TET2 mRNA的表达水平,细胞免疫染色法检测TET2蛋白的细胞定位及表达。将pEGFP-CagA通过脂质体介导转染GES-1细胞,用200μmol/L H2O2处理GES-1细胞建立氧化应激模型,流式细胞仪检测细胞中活性氧(reactive oxygen species,ROS)和细胞周期的变化。结果:TET2 mRNA在GES-1细胞的表达水平低于胃癌MGC-803细胞(1.00±0.08 vs 1.68±0.07,P<0.05),TET2蛋白在GES-1细胞表达水平低于胃癌MGC-803细胞(8.09±3.57 vs14.60±2.31,P<0.05)。与阴性对照组pEGFP-N1相比,pEGFP-CagA转染组GES-1细胞中TET2 mRNA表达水平升高(1.00±0.04 vs 0.06±0.00,P<0.05),TET2蛋白表达水平也升高(16.45±4.40 vs 10.82±3.39,P<0.05),ROS积累水平升高(18.39±4.52 vs 15.31±4.40,P<0.05),细胞周期检测出现明显的凋亡峰。氧化应激(H2O2处理)模型中GES-1细胞与空白对照GES-1细胞相比,TET2 mRNA水平升高(1.44±0.02 vs 1.00±0.04,P<0.05),TET2蛋白表达水平增高(15.72±4.52vs 11.74±4.34,P<0.05)。结论:幽门螺旋杆菌毒力因子CagA可诱导GES-1细胞ROS增高和细胞周期的失衡,氧化应激可以诱导TET2表达上调,TET2可能参与CagA的致癌过程。
基金supported by the Outstanding Youth Foundation of NSFC (31025026)the Creative Team Project of Chinese Ministry of Education (IRT-0831)+1 种基金the National Natural Science Foundation of China (30800606 and 31072010)the Natural Science Foundation of Hubei Province (2010CDB10106)
文摘BTG1 （B-cell Translocation Gene 1） , a member of the BTG / TOB （Transducer of ErbB-2） family of anti-proliferation factors,has been proven to have an unfavorable effect on muscle fiber growth in several species. The porcine BTG1 gene was cloned and its 5＇ flanking promoter region sequence, and characterized the expression patterns in different tissues of adult pigs and in fetal skeletal muscle at different developmental stages in two breeds. The tissue distribution pattern analyses revealed that the mRNA of porcine BTG1 was ubiquitously expressed in the six tissues of both Landrace and Tongcheng pigs. Real-time quantitative reverse transcriptase-PCR results showed that BTG1 mRNA expression levels were significantly different among the three fetal ages in Tongcheng pigs,while no significant differences were found among the three ages in Landrace pigs. Furthermore,the expression of BTG1 in Landrace pigs was significantly lower than in Tongcheng pigs at all three ages. The temporal expression profiles of the BTG1 gene in mouse myoblast C 2 C 12 cells were shown to be consistent with those of the myogenin gene. A single nucleotide polymorphism （SNP） ,g. 281C 〉 T,was identified in the 3＇UTR and allele frequencies were detected in seven pig breed populations. Significant associations were found between the g. 281C 〉 T polymorphism and growth and meat quality traits. Our results indicate that the porcine BTG1 gene could play a potential role in markerassisted selection and as such may be a gene of economic importance.
基金Science Fund for Creative Research Groups of the National Natural Science Foundation of China,Grant/Award Number:81521004National Natural Science Foundation of China,Grant/Award Numbers:81922061,82172992,81903391,81702266+2 种基金Research Unit of Prospective Cohort of Cardiovascular Diseases and Cancers,Chinese Academy of Medical Sciences,Grant/Award Number:2019RU038Natural Science Foundation of Jiangsu Province,Grant/Award Numbers:BK20211253,BK20190148Postgraduate Research&Practice Innovation Program of Jiangsu Province,Grant/Award Number:KYCX18_0195。
文摘Background:Epigenetic alterations have been shown to contribute immensely to human carcinogenesis.Dynamic and reversible N6-methyladenosine(m6A)RNA modification regulates gene expression and cell fate.However,the reasons for activation of KIAA1429(also known as VIRMA,an RNA methyltransferase)and its underlying mechanism in lung adenocarcinoma(LUAD)remain largely unexplored.In this study,we aimed to clarify the oncogenic role of KIAA1429 in the tumorigenesis of LUAD.Methods:Whole-genome sequencing and transcriptome sequencing of LUAD data were used to analyze the gene amplification of RNA methyltransferase.The in vitro and in vivo functions of KIAA1429 were investigated.Transcriptome sequencing,methylated RNA immunoprecipitation sequencing(MeRIP-seq),m6A dot blot assays and RNA immunoprecipitation(RIP)were performed to confirm the modified gene mediated by KIAA1429.RNA stability assays were used to detect the half-life of the target gene.Results:Copy number amplification drove higher expression of KIAA1429 in LUAD,whichwas correlatedwith poor overall survival.Manipulating the expression of KIAA1429 could regulate the proliferation and metastasis of LUAD.Mechanistically,the target genes of KIAA1429-mediated m6A modification were confirmed by transcriptome sequencing and MeRIP-seq assays.We also revealed that KIAA1429 could regulate BTG2 expression in an m6A-dependent manner.Knockdown of KIAA1429 significantly decreased the m6A levels of BTG2 mRNA,leading to enhanced YTH m6A RNA binding protein 2(YTHDF2,the m6A“reader”)-dependent BTG2 mRNA stability and promoted the expression of BTG2;thus,participating in the tumorigenesis of LUAD.Conclusions:Our data revealed the activation mechanism and important role of KIAA1429 in LUAD tumorigenesis,which may provide a novel view on the targeted molecular therapy of LUAD.
