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Regulatory mechanism of RAD51-associated protein 1 and its upstream molecules in hepatocellular carcinoma
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作者 Jin-Wen Chai Yu-Na Dong 《Medical Data Mining》 2023年第4期34-45,共12页
Background:The DNA damage repair mechanism plays a crucial role in the occurrence and development of hepatocellular carcinoma(HCC),and RAD51-associated protein 1(RAD51AP1)has received increasing attention as an import... Background:The DNA damage repair mechanism plays a crucial role in the occurrence and development of hepatocellular carcinoma(HCC),and RAD51-associated protein 1(RAD51AP1)has received increasing attention as an important protein in the homologous recombination repair pathway.However,the role of RAD51AP1 and its molecular regulatory mechanism in HCC still need further investigation.Methods:We first analysed RAD51AP1 expression,functional enrichment and prognostic value in HCC.Then,the miRWalk,miRDB,and Encyclopedia of RNA Interactomes databases were used to predict the corresponding microRNAs and long noncoding RNAs of RAD51AP1,and their expression levels and prognostic value were analysed.Results:RAD51AP1 was upregulated in the majority of cancers include HCC.The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses revealed that RAD51AP1 was mainly involved in pathways related to the cell cycle and repair in HCC.Moreover,the expression level of RAD51AP1 was significantly correlated with T stage,pathologic stage,histologic grade and the level of alpha-fetoprotein.In addition,RAD51AP1 was an independent risk factor significantly and had a high predictive value in HCC.Based on ceRNA network,RAD51AP1 may be regulated by upstream MSC-AS1 and hsa-miR-23c to affect the HCC occurrence and development.Conclusions:High expression of RAD51AP1 plays an important biological role in the cell cycle and repair pathways,and has important diagnostic and prognostic value in HCC.Based on the regulatory mechanism of ceRNA network,we speculate that lncRNA MSC-AS1 acts on hsa-miR-23c and regulates DNA damage repair of HCC through RAD51AP1.It provides a new perspective for further study of DNA damage repair mechanism and potential related treatment of HCC. 展开更多
关键词 RAD51-associated protein 1 MSC-AS1 miR-23c ceRNA hepatocellular carcinoma bioinformatics analysis
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Molecular Docking Studies of Botanical Beverage Mix Berries (LIFEGREENTM) against Breast Cancer Cells from Targeted Protein 1QQG, 7B5Q & 7B5O & Uterine Fibroid from Targeted Protein 2AYR, 6T41 & 3GRF
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作者 Ummi Shahieda Lazaroo Bt Zurrein Shah Lazaroo Navanithan Sivanananthan Chua Kia How 《Computational Molecular Bioscience》 2024年第2期59-123,共65页
Fibroids, also called leiomyomas or myomas, are communal tumors of the muscle or uterine wall that affect about 20% of females who are of reproductive age. They can look as if singly or in clusters, and they often cea... Fibroids, also called leiomyomas or myomas, are communal tumors of the muscle or uterine wall that affect about 20% of females who are of reproductive age. They can look as if singly or in clusters, and they often cease to grow after menopause. Fibroids can be classified as intramural, sub serosal, pedunculated, or submucosal based on where they are positioned in the uterus. Although fibroids are benign, they can grow quickly and cause a range of symptoms, such as pelvic pressure, heavy menstrual flow, and infertility. As a result, fibroids are a main reason behind hysterectomy surgeries. The majority of cases of breast cancer are ductal and lobular cancers, making it the second utmost common cancer in women international. Gene mutations like those in BRCA1 or BRCA2 knowingly raise the risk of breast and other cancers, typically with an earlier cancer onset. Cancer risk is influenced by a complex interplay of genetic abnormalities, environmental factors, and lifestyle selections. Further research into these relations is domineering. Although they are common in uterine leiomyomas, especially multiple leiomyomas, MED12 mutations do not significantly correlate with tumor size. These mutations have also been noticed in smooth muscle tumors and leiomyosarcomas, two other types of uterine cancer. The identification of MED12 mutations as the sole genetic abnormality originates in leiomyomas raises the opportunity of a role in the genesis of cancer. 10% - 15% of women who are of reproductive age have endometriosis, which grants serious difficulties because of its chronic nature and range of clinical symptoms. Even after effective surgeries, issues reoccur often, adding to the enormous financial burden. The effects of MED12 mutations have been experiential in recent studies examining the molecular causes of endometriosis-associated infertility, which have shown anomalies in cellular connections and signaling cascades. Computational techniques were used in this study to investigate LifeGreenTM’s potential to prevent uterine fibroids and breast cancer. The efficacy of LifeGreenTM as a preventive measure or a treatment for common gynecological matters was examined and modeled. We investigated the mechanisms underlying LifeGreenTM’s benefits in the treatment of uterine fibroids and breast cancer using computational techniques. Our research contributes to our understanding of its potential therapeutic benefits for women’s health. 展开更多
关键词 Uterine Fibroid Breast Cancer Molecular Docking IRS protein brca1 brca2 MED12-a ENDOMETRIOSIS
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BRCA-1和TopoII在乳腺癌中的表达及临床病理关系分析 被引量:7
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作者 彭芳 张功亮 +4 位作者 王建 郭广秀 黄金长 肖军兰 钟斌 《实验与检验医学》 CAS 2012年第6期552-554,共3页
目的研究BRCA-1和TopoII在乳腺浸润性导管癌的表达及临床病理参数的关系,了解两者表达的相关性。方法应用免疫组织化学法检测BRCA-1和TopoII在92例乳腺癌组织的表达。结果乳腺癌组织中BRCA-1表达较癌旁正常乳腺组织明显降低(P<0.05)... 目的研究BRCA-1和TopoII在乳腺浸润性导管癌的表达及临床病理参数的关系,了解两者表达的相关性。方法应用免疫组织化学法检测BRCA-1和TopoII在92例乳腺癌组织的表达。结果乳腺癌组织中BRCA-1表达较癌旁正常乳腺组织明显降低(P<0.05);乳腺癌组织TopoII表达较癌旁正常乳腺组织明显升高(P<0.05);BRCA-1和TopoII在乳腺癌组织中的表达无明显相关性;乳腺癌中肿瘤的大小、组织学分级和淋巴结转移率与BRCA-1的阳性表达呈负相关,与TopoII阳性表达率呈正相关。结论BRCA-1基因表达降低与乳腺癌的发生有密切关系,TopoII是反映细胞恶性程度较客观的指标。 展开更多
关键词 乳腺癌 免疫组织化学 brca-1 TOPOII 蛋白表达
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乳腺癌手术标本BRCA-1蛋白表达与HER-2基因扩增的临床意义 被引量:2
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作者 阮建波 康东平 《求医问药(下半月刊)》 2011年第3期36-36,58,共2页
目的:研究乳腺癌患者乳腺癌手术标本中乳腺癌易感基因1(breast cancer susceptibility gene1,BRCA-1)蛋白表达、原癌基因HER-2的基因扩增与蛋白表达及其与临床病理特征之间的关系。方法:采用免疫组织化学和显色原位杂交的方法,检测乳腺... 目的:研究乳腺癌患者乳腺癌手术标本中乳腺癌易感基因1(breast cancer susceptibility gene1,BRCA-1)蛋白表达、原癌基因HER-2的基因扩增与蛋白表达及其与临床病理特征之间的关系。方法:采用免疫组织化学和显色原位杂交的方法,检测乳腺癌手术切除肿瘤组织中的HER-2和BRCA-1蛋白表达以及HER-2基因扩增情况,对这两个基因的表达与临床相关病理特征之间的关系进行分析。结果:BRCA-1和HER-2蛋白表达在不同组织类型中差异无统计学意义,但在不同肿瘤大小、不同组织分级和有无淋巴结转移中差异有显著性(P<0.05)。BRCA-1蛋白表达与HER-2基因扩增率呈负相关。结论:BRCA-1和HER-2蛋白表达对乳腺癌的发生发展具有一定作用,检测BRCA-1和HER-2蛋白表达在乳腺癌的早期诊断、判断生物学行为、预测预后中有重要意义。另外BRCA-1与HER-2可能存在相关性,须进一步研究。 展开更多
关键词 乳腺癌 brca-1 HER-2 蛋白表达 基因扩增
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DNA repair genes BRCA1 and DNA-PKcs have great potential in radiation therapy
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作者 Jiao Yang Ximing XU Yanrong Hao 《The Chinese-German Journal of Clinical Oncology》 CAS 2012年第12期683-688,共6页
Radiotherapy is a part of the front-line treatment regime for many cancers. The mechanisms of radiation-induced effects in cancers mainly involves double-strand breaks (DBS) which plays very important role in maintain... Radiotherapy is a part of the front-line treatment regime for many cancers. The mechanisms of radiation-induced effects in cancers mainly involves double-strand breaks (DBS) which plays very important role in maintaining the stability of gene. As DNA repair gene breast cancer 1 (BRCA1) and DNA-dependent protein kinase catalytic subunit (DNA-PKcs) can act to maintain genetic stability though two distinct and complementary mechanisms for DNA DSB repair-homologous recombination (HR) and non-homologous end joining (NHEJ). Therefor, BRCA1 and DNA-PKcs are closely associated with radiation sensitivity, which means that they may be used as a useful tool to predict radio sensitivity in human tumour cells. 展开更多
关键词 breast cancer 1 brca1 DNA-dependent protein kinase catalytic subunit (DNA-PKcs) double-strand breaks(DBS) repair radiation sensitivity
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BRIP1在胶质瘤中的表达及临床意义
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作者 王圣桃 王新庄 +1 位作者 高铭 韩大勇 《中国临床神经外科杂志》 2021年第6期434-437,共4页
目的探讨乳腺癌易感基因相互作用蛋白1(BRIP1)在胶质瘤中的表达及其与病人预后的相关性。方法从GEO数据库GPL570平台选取三个BRIP1基因表达谱芯片(GSE4290、GSE50161和GSE74195)分析胶质瘤BRIP1的表达情况。使用TC⁃GA下载有关胶质瘤BRIP... 目的探讨乳腺癌易感基因相互作用蛋白1(BRIP1)在胶质瘤中的表达及其与病人预后的相关性。方法从GEO数据库GPL570平台选取三个BRIP1基因表达谱芯片(GSE4290、GSE50161和GSE74195)分析胶质瘤BRIP1的表达情况。使用TC⁃GA下载有关胶质瘤BRIP1表达、生存率和临床特征的数据,多因素Cox比例回归风险模型分析胶质瘤生存预后的影响因素;利用受试者工作特征(ROC)曲线评估BRIP1表达水平与胶质瘤生存预后的关系;通过基因富集分析胶质瘤BRIP1相关的细胞信号通路。结果胶质瘤BRIP1表达水平相比于正常样本明显升高(P<0.05)。多因素Cox回归分析结果表明,BRIP1高表达(HR=1.250;95%CI:1.056~1.480;P<0.001)是胶质瘤不良预后的独立危险因素。生存曲线分析显示,相较于BRIP1低表达组,BRIP1高表达组胶质瘤生存期明显缩短(P<0.001)。ROC曲线分析显示BRIP1表达水平预测胶质瘤1年不良预后的曲线下面积(AUC)为0.744,最佳截断值为0.302,敏感性为0.832,特异性为0.528;预测3年不良预后的AUC为0.801,最佳截断值为0.420,敏感性为0.696,特异性为0.809;预测5年不良预后的AUC为0.767,最佳截断值为0.420时,敏感性为0.593,特异性为0.842。基因富集分析显示BRIP1基因主要富集于DNA复制、同源重组、错配修复和细胞周期等信号转导通路。结论BRIP1在人脑胶质瘤表达上调,与胶质瘤不良预后密切相关。 展开更多
关键词 胶质瘤 乳腺癌易感基因相互作用蛋白1(BRIP1) 预后 生物信息学
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Calpastatin participates in the regulation of cell migration in BAP1-deficient uveal melanoma cells
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作者 Han Yue Feng-Xi Meng +3 位作者 Jiang Qian Bin-Bin Xu Gang Li Ji-Hong Wu 《International Journal of Ophthalmology(English edition)》 SCIE CAS 2019年第11期1680-1687,共8页
AIM: To detect how BRCA-associated protein 1(BAP1) regulates cell migration in uveal melanoma(UM) cells. METHODS: Wound healing and transwell assays were performed to detect UM cell migration abilities. Protein chip, ... AIM: To detect how BRCA-associated protein 1(BAP1) regulates cell migration in uveal melanoma(UM) cells. METHODS: Wound healing and transwell assays were performed to detect UM cell migration abilities. Protein chip, immunoprecipitations and surface plasmon resonance analyses were applied to identify BAP1 protein partners. Western blot and calpain activity assays were used to test the expression and function of calpastatin(CAST). RESULTS: CAST protein was confirmed as a new BAP1 protein partner, and loss of BAP1 reduced the expression and function of CAST in UM cells. The overexpression of CAST rescued the cell migration phenotype caused by BAP1 loss.CONCLUSION: BAP1 interacts with CAST in UM cells, and CAST and its subsequent calpain pathway may mediate BAP1-related cell migration regulation. 展开更多
关键词 UVEAL MELANOMA brca-associated protein 1 CALPASTATIN cell migration
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乳腺癌易感基因蛋白在乳腺癌组织中的表达及其与临床病理关系 被引量:10
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作者 刘锦平 杨红 +2 位作者 周蕾蕾 周毅 罗诚 《中国癌症杂志》 CAS CSCD 2003年第1期31-35,共5页
目的 :探讨乳腺癌易感基因 (BRCA1 )蛋白在乳腺癌组织中的表达以及与乳腺癌临床病理的关系 ,了解BRCA1 蛋白的表达与P53及C -erbB2 表达之间的相关性。方法 :采用LDP免疫组化法对 60例乳腺癌 ,1 0例乳腺良性疾病患者的石腊标本进行了BRC... 目的 :探讨乳腺癌易感基因 (BRCA1 )蛋白在乳腺癌组织中的表达以及与乳腺癌临床病理的关系 ,了解BRCA1 蛋白的表达与P53及C -erbB2 表达之间的相关性。方法 :采用LDP免疫组化法对 60例乳腺癌 ,1 0例乳腺良性疾病患者的石腊标本进行了BRCA1 蛋白 ,P53 ,C -erbB2 的联合检测 ,结合患者的年龄、家族史、病理组织学分级 ,腋淋巴结的转移情况 ,雌、孕激素受体状况等因素进行相关分析。结果 :BRCA1 蛋白的阳性表达率在恶性组为 61 .66 % (37 60 ) ,在良性组表达为 0 (0 1 0 )。BRCA1 蛋白的表达绝大部分为胞质表达。BRCA1 蛋白的表达与年龄呈负相关 (r=- 0 .2 95 ,P <0 .0 5) ,与家族史呈正相关 (r=0 .50 9,P <0 .0 1 )BRCA1 蛋白的表达在不同组织学分级中 (Ⅰ~Ⅲ )存在差异 (P <0 .0 5) ,随着组织学分级的增加BRCA1 蛋白阳性表达的程度也增高 (r=0 .41 3 ,P <0 .0 1 ) ,BRCA1 蛋白的表达在有无腋淋巴结转移的病例中存在差异 (P <0 .0 5) ,随着腋淋巴结转移数目的增加 ,BRCA1 蛋白阳性表达的程度也增高 (r=0 .365 ,P <0 .0 1 )。BRCA1 蛋白的表达与ER、PR之间以及与P53及C -erbB2表达之间本研究未见其相关性。结论 :BRCA1 蛋白的表达与年轻、有家族史 ,组织学分级高 ,腋淋巴结转移相关 ,随着进一步研究的深? 展开更多
关键词 乳腺肿瘤 免疫组织化学 brca1蛋白
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选择性自噬的研究 被引量:3
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作者 肖伊宁 蒋欣 +1 位作者 吕佩源 李玲 《脑与神经疾病杂志》 2015年第4期316-319,共4页
自噬(autophagy)是广泛存在于真核细胞内的一种溶酶体降解途径。这个古老而保守的降解途径主要有三种形式:巨自噬(giant autophagy)、微自噬(microautophagy)和分子伴侣介导的自噬(chaperon-mediated autophagy,CMA)。自噬... 自噬(autophagy)是广泛存在于真核细胞内的一种溶酶体降解途径。这个古老而保守的降解途径主要有三种形式:巨自噬(giant autophagy)、微自噬(microautophagy)和分子伴侣介导的自噬(chaperon-mediated autophagy,CMA)。自噬一直被认为是一个饥饿诱导的非选择性本体降解途径,通过细胞质成分的“自我消化”,细胞在有限的能源中回收所有的营养成分。泛素化底物通过泛素受体传递,后者包括 p62/SQSTM1(sequestosome1)、BRCA1基因1邻位(neighbor of BRCA1 gene 1,NRB1)、核点蛋白质52(nuclear protein 52,NDP52)、组蛋白去乙酰酶6(histone deacetylase 6,HDAC6)及自噬相关 FYVE 蛋白(autophagy-linked FYVE protein,ALFY),泛素依赖的传感器系统负责底物特异性。自噬清除之前,这些受体将泛素化底物连接到初期自噬体,后者携带有泛素样(ubiquitin-like,UbL)蛋白,如其表面的微管相关蛋白1轻链3(microtubule associated protein 1 light chain 3,LC3)或 GABAA 受体相关蛋白(GABAA receptor associated protein,GABARAP)。因此,自噬受体结合到泛素和 LC3或 GABARAP 蛋白能够通过选择性自噬调控蛋白质降解。依据其底物名称来区别各种类型的选择性途径,如线粒体自噬(mitophagy)、过氧化物酶体自噬(pexophagy)、内质网自噬( reticulophagy)、核糖体自噬( ribophagy)和异源自噬(xenophagy)。 展开更多
关键词 自噬体 protein brca1基因 UBIQUITIN 受体相关蛋白 蛋白质降解 底物特异性 CHAPERON
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Gadd45在恶性肿瘤中的研究进展 被引量:4
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作者 王赟 季洪亮 《中国实验诊断学》 2013年第6期1155-1158,共4页
Gadd45与DNA损伤修复密切相关,全称为生长阻滞与DNA损伤诱生蛋白45(growth arrest anddNA damage inducible protein 45,Gadd45),其基因家族属于p53和BRCA1的下游靶基因,在细胞生存及细胞凋亡中发挥重要作用。Gadd45家族由Gadd45α、G... Gadd45与DNA损伤修复密切相关,全称为生长阻滞与DNA损伤诱生蛋白45(growth arrest anddNA damage inducible protein 45,Gadd45),其基因家族属于p53和BRCA1的下游靶基因,在细胞生存及细胞凋亡中发挥重要作用。Gadd45家族由Gadd45α、Gadd45β和Gadd45γ三个成员组成,它们的基因排列序列非常相似,通常会在环境损伤因子作用下,随DNA修复过程的启动而诱导产生。 展开更多
关键词 GADD45Β 恶性肿瘤 DNA损伤修复 protein 下游靶基因 damage 基因家族 brca1
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