Unveiling the secrets of diatom-mediated calcification:Implications for the biological pump

Siliceous diatoms are one of the most prominent actors in the oceans,and they account for approximately 40%of the primary production and particulate organic carbon export flux.It is believed that changes in carbon flux caused by variations in diatom distribution can lead to significant climate shifts.Although the fundamental pathways of diatom-driven carbon sequestration have long been established,there are no reports of CaCO_(3) precipitation induced by marine diatom species.This manuscript introduces novel details regarding the enhancement of aragonite precipitation during photosynthesis in Skeletonema costatum in both artificial and natural seawater.Through direct measurements of cell surfaces via a pH microelectrode and zeta potential analyzer,it was determined that the diatom-mediated promotion of CaCO_(3) precipitation is achieved through the creation of specific microenvironments with concentrated[CO_(3)^(2-)]and[Ca^(2+)]and/or the dehydrating effect of adsorbed Ca^(2+).Based on this mechanism,it is highly plausible that diatom-mediated calcification could occur in the oceans,an assertion that was supported by the significant deviation of total alkalinity(TA)from the conservative TA-salinity mixing line during a Skeletonema costatum bloom in the East China Sea and other similar occurrences.The newly discovered calcification pathway establishes a link between particulate inorganic and organic carbon flux and thus helps in the reassessment of marine carbon export fluxes and CO_(2) sequestration efficiency.This discovery may have important ramifications for assessing marine carbon cycling and predicting the potential effects of future ocean acidification.

Overlooked contribution of the biological pump to the Pacific Arctic nitrogen deficit

The nutrient-rich Pacific Ocean seawater that flows through the Bering Strait into the Chukchi Sea is generally considered to be the most important source of nutrients to the Arctic euphotic zone.The inflow is characterized by nitrogen deficit and low nitrate/phosphate(N/P)ratios;this is ascribed to sedimentary denitrification on the Chukchi shelf by preoccupant opinions.However,the Chukchi Sea also has high primary production,which raises the question of whether the biological pump may also significantly modulate nutrient properties of the throughflow.Here,we show that nitrate concentrations of the Pacific inflow gradually decrease northward in association with notable biological utilization.The phytoplankton N/P uptake ratio was 8.8±2.27,higher than the N/P ratio of Pacific inflow water(5-6).This uptake ratio,in combination with efficient vertical nitrogen export,serves to preferentially remove nitrogen(relative to phosphorus)from upper waters,thereby further intensifying the Arctic nitrogen deficit.Accordingly,as large as about 111.7×10^(9)mol N yr^(−1)of nitrate was extra consumed,according to the real N/P uptake ratio rather than the ratio of the Pacific inflow,which may be as great as half the nitrogen loss ascribed to sedimentary denitrification.Our findings suggest that besides sedimentary denitrification,biological disproportionate utilization of nutrients in the Chukchi Sea upper water is another important contributor to the nitrogen limitation and excess phosphorus in the upper Arctic Ocean.In the rapid Arctic change era,the predicted reinforced biological carbon pump could further impact the nutrient dynamics and biogeochemical process of the Arctic Ocean.

Response of phytoplankton community to different water types in the western Arctic Ocean surface water based on pigment analysis in summer 2008

Nutrients and photosynthesis pigments were investigated in the western Arctic Ocean during the 3rd Chinese Arctic Research Expedition Cruise in summer 2008. The study area was divided into five provinces using the K- means clustering method based on the physical and chemical characteristics of the sea water, and to discuss the distribution of the phytoplankton community structure in these provinces. CHEMTAX software was performed using HPLC pigments to estimate the contributions of eight algal classes to the total chlorophyll a （TChl a）. The results showed that on the Chukchi Shelf, the Pacific Ocean inflow mainly controlled the Chl a biomass and phytoplankton communities by nutrient concentrations. The high nutrient Anadyr Water and Bering Shelf Water （AnW and BSW） controlled region have high Chl a levels and the diatom dominated community structure. In contrast, in the region occupied by low-nutrient like Alaska Coastal Water （ACW）, the Chl a biomass was low, with pico- and nano-phytoplankton as dominated species, such as prasinophytes, chrysophytes and cryptophytes. However, over the off-shelf, the ice cover condition which would affect the physical and nutrient concentrations of the water masses, in consequence had a greater impact on the phytoplankton community structure. Diatom dominated in ice cover region and its contribution to Chl a biomass was up to 75%. In the region dose to the Mendeleev Abyssal Plain （MAP）, controlled by sea-ice melt water with relatively high salinity （MW-HS）, higher nutrient and Chl a concentrations were found and the phytoplankton was dominated by pico- and nano-algae, while the diatom abundance reduced to 33%. In the southern Canada Basin, an ice-free basin （IfB） with the lowest nutrient concentrations and most freshened surface water, low Chl a biomass was a consequence of low nutrients. The ice retreating and a prolonged period of open ocean may not be beneficial to the carbon export efficiency due to reducing the Chl a biomass or intriguing smaller size algae growth.

The large increase of δ^(13)C_(carb)-depth gradient and the end-Permian mass extinction

Carbonate carbon isotope （δ^13Ccarb） has received considerable attention in the Permian-Triassic transition for its rapid negative shift coinciding with the great end-Permian mass extinction event. The mechanism has long been debated for such a c~ δ^13Ccarb negative excursion through the end-Permian crisis and subsequent large perturbations in the entire Early Triassic. A δ^13Ccarb depth gradient is observed at the Permian-Triassic boundary sections of different water-depths, i.e., the Yangou, Meishan, and Shangsi sections, and such a large δ^13Ccarb-depth gradient near the end-Permian mass extinction horizon is believed to result from a stratified Paleotethys Ocean with widespread anoxic/euxinic deep water. The evolution of δ^13Ccarb-depth gradient com- bined with paleontological and geochemical data suggests that abundant cyanobacteria and vigorous biological pump in the immediate aftermath of the end-Permian extinction would be the main cause of the large δ^13Ccarb-depth gradient, and the enhanced continental weathering with the mass extinction on land provides a mass amount of nutriment for the flourishing cyanobacteria. Photic zone anoxia/euxinia from the onset of chemocline upward excursion might be the direct cause for the mass extinction whereas the instability of chemocline in the stratified Early Triassic ocean would be the reason for the delayed and involuted biotic recovery.

Carbon pools and fluxes in the China Seas and adjacent oceans

The China Seas include the South China Sea, East China Sea, Yellow Sea, and Bohai Sea. Located off the Northwestern Pacific margin, covering 4700000 km^2 from tropical to northern temperate zones, and including a variety of continental margins/basins and depths, the China Seas provide typical cases for carbon budget studies. The South China Sea being a deep basin and part of the Western Pacific Warm Pool is characterized by oceanic features; the East China Sea with a wide continental shelf, enormous terrestrial discharges and open margins to the West Pacific, is featured by strong cross-shelf materials transport; the Yellow Sea is featured by the confluence of cold and warm waters; and the Bohai Sea is a shallow semiclosed gulf with strong impacts of human activities. Three large rivers, the Yangtze River, Yellow River, and Pearl River, flow into the East China Sea, the Bohai Sea, and the South China Sea, respectively. The Kuroshio Current at the outer margin of the Chinese continental shelf is one of the two major western boundary currents of the world oceans and its strength and position directly affect the regional climate of China. These characteristics make the China Seas a typical case of marginal seas to study carbon storage and fluxes. This paper systematically analyzes the literature data on the carbon pools and fluxes of the Bohai Sea,Yellow Sea, East China Sea, and South China Sea, including different interfaces(land-sea, sea-air, sediment-water, and marginal sea-open ocean) and different ecosystems(mangroves, wetland, seagrass beds, macroalgae mariculture, coral reefs, euphotic zones, and water column). Among the four seas, the Bohai Sea and South China Sea are acting as CO_2 sources, releasing about0.22 and 13.86–33.60 Tg C yr^(-1) into the atmosphere, respectively, whereas the Yellow Sea and East China Sea are acting as carbon sinks, absorbing about 1.15 and 6.92–23.30 Tg C yr^(-1) of atmospheric CO_2, respectively. Overall, if only the CO_2 exchange at the sea-air interface is considered, the Chinese marginal seas appear to be a source of atmospheric CO_2, with a net release of 6.01–9.33 Tg C yr^(-1), mainly from the inputs of rivers and adjacent oceans. The riverine dissolved inorganic carbon (DIC) input into the Bohai Sea and Yellow Sea, East China Sea, and South China Sea are 5.04, 14.60, and 40.14 Tg C yr^(-1),respectively. The DIC input from adjacent oceans is as high as 144.81 Tg C yr^(-1), significantly exceeding the carbon released from the seas to the atmosphere. In terms of output, the depositional fluxes of organic carbon in the Bohai Sea, Yellow Sea, East China Sea, and South China Sea are 2.00, 3.60, 7.40, and 5.92 Tg C yr^(-1), respectively. The fluxes of organic carbon from the East China Sea and South China Sea to the adjacent oceans are 15.25–36.70 and 43.93 Tg C yr^(-1), respectively. The annual carbon storage of mangroves, wetlands, and seagrass in Chinese coastal waters is 0.36–1.75 Tg C yr^(-1), with a dissolved organic carbon(DOC) output from seagrass beds of up to 0.59 Tg C yr^(-1). Removable organic carbon flux by Chinese macroalgae mariculture account for 0.68 Tg C yr^(-1) and the associated POC depositional and DOC releasing fluxes are 0.14 and 0.82 Tg C yr^(-1), respectively. Thus, in total, the annual output of organic carbon, which is mainly DOC, in the China Seas is 81.72–104.56 Tg C yr^(-1). The DOC efflux from the East China Sea to the adjacent oceans is 15.00–35.00 Tg C yr^(-1). The DOC efflux from the South China Sea is 31.39 Tg C yr^(-1). Although the marginal China Seas seem to be a source of atmospheric CO_2 based on the CO_2 flux at the sea-air interface, the combined effects of the riverine input in the area, oceanic input, depositional export,and microbial carbon pump(DOC conversion and output) indicate that the China Seas represent an important carbon storage area.

Eco-engineering approaches for ocean negative carbon emission

The goal of achieving carbon neutrality in the next 30-40 years is approaching worldwide consensus and requires coordinated efforts to combat the increasing threat of climate change.Two main sets of actions have been proposed to address this grand goal.One is to reduce anthropogenic CO2emissions to the atmosphere,and the other is to increase carbon sinks or negative emissions,i.e.,removing CO2from the atmosphere.Here we advocate eco-engineering approaches for ocean negative carbon emission(ONCE),aiming to enhance carbon sinks in the marine environment.An international program is being established to promote coordinated efforts in developing ONCE-relevant strategies and methodologies,taking into consideration ecological/biogeochemical processes and mechanisms related to different forms of carbon(inorganic/organic,biotic/abiotic,particulate/dissolved) for sequestration.We focus on marine ecosystem-based approaches and pay special attention to mechanisms that require transformative research,including those elucidating interactions between the biological pump(BP),the microbial carbon pump(MCP),and microbially induced carbonate precipitation(MICP).Eutrophic estuaries,hypoxic and anoxic waters,coral reef ecosystems,as well as aquaculture areas are particularly considered in the context of efforts to increase their capacity as carbon sinks.ONCE approaches are thus expected to be beneficial for both carbon sequestration and alleviation of environmental stresses.

Significance of the carbon sink produced by H_2O–carbonate–CO_2–aquatic phototroph interaction on land

One of the most important questions in the science of global change is how to balance the atmospheric CO2 budget. There is a large terrestrial missing carbon sink amounting to about one billion tonnes of carbon per annum. The locations, magnitudes, variations, and mechanisms responsible for this terrestrial missing carbon sink are uncertain and the focus of much continuing debate. Although the positive feedback between global change and silicate chemical weathering is used in geochemical models of atmospheric CO2, this feedback is believed to operate over a long timescale and is therefore generally left out of the current discussion of human impact upon the carbon budget. Here, we show, by synthesizing recent findings in rock weathering research and studies into biological carbon pump effects in surface aquatic ecosystems, that the carbon sink produced by carbonate weathering based on the H2O- carbonate-CO2-aquatic phototroph interaction on land not only totals half a billion tonnes per annum, but also displays a significant increasing trend under the influence of global warming and land use change; thus, it needs to be included in the global carbon budget.