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Consistent and Specific Multi-View Functional Brain Networks Fusion for Autism Spectrum Disorder Diagnosis
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作者 Chaojun Zhang Chengcheng Wang +1 位作者 Limei Zhang Yunling Ma 《Journal of Applied Mathematics and Physics》 2023年第7期1914-1929,共16页
Functional brain networks (FBN) based on resting-state functional magnetic resonance imaging (rs-fMRI) have become an important tool for exploring underlying organization patterns in the brain, which can provide an ob... Functional brain networks (FBN) based on resting-state functional magnetic resonance imaging (rs-fMRI) have become an important tool for exploring underlying organization patterns in the brain, which can provide an objective basis for brain disorders such as autistic spectrum disorder (ASD). Due to its importance, researchers have proposed a number of FBN estimation methods. However, most existing methods only model a type of functional connection relationship between brain regions-of-interest (ROIs), such as partial correlation or full correlation, which is difficult to fully capture the subtle connections among ROIs since these connections are extremely complex. Motivated by the multi-view learning, in this study we propose a novel Consistent and Specific Multi-view FBNs Fusion (CSMF) approach. Concretely, we first construct multi-view FBNs (i.e., multiple types of FBNs modelling various relationships among ROIs), and then these FBNs are decomposed into a consistent representation matrix and their own specific matrices which capture their common and unique information, respectively. Lastly, to obtain a better brain representation, it is fusing the consistent and specific representation matrices in the latent representation spaces of FBNs, but not directly fusing the original FBNs. This potentially makes it more easily to find the comprehensively brain connections. The experimental results of ASD identification on the ABIDE datasets validate the effectiveness of our proposed method compared to several state-of-the-art methods. Our proposed CSMF method achieved 72.8% and 76.67% classification performance on the ABIDE dataset. 展开更多
关键词 Functional brain Network FUSION CONSISTENCY SPECIFICITY Autism Spectrum Disorder
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Modulatory effects of acupuncture on brain networks in mild cognitive impairment patients 被引量:34
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作者 Ting-ting Tan Dan Wang +10 位作者 Ju-ke Huang Xiao-mei Zhou Xu Yuan Jiu-ping Liang Liang Yin Hong-liang Xie Xin-yan Jia Jiao Shi Fang Wang Hao-bo Yang Shang-jie Chen 《Neural Regeneration Research》 SCIE CAS CSCD 2017年第2期250-258,共9页
Functional magnetic resonance imaging has been widely used to investigate the effects of acupuncture on neural activity. However, most functional magnetic resonance imaging studies have focused on acute changes in bra... Functional magnetic resonance imaging has been widely used to investigate the effects of acupuncture on neural activity. However, most functional magnetic resonance imaging studies have focused on acute changes in brain activation induced by acupuncture. Thus, the time course of the therapeutic effects of acupuncture remains unclear. In this study, 32 patients with amnestic mild cognitive impairment were randomly divided into two groups, where they received either Tiaoshen Yizhi acupuncture or sham acupoint acupuncture. The needles were either twirled at Tiaoshen Yizhi acupoints, including Sishencong(EX-HN1), Yintang(EX-HN3), Neiguan(PC6), Taixi(KI3), Fenglong(ST40), and Taichong(LR3), or at related sham acupoints at a depth of approximately 15 mm, an angle of ± 60°, and a rate of approximately 120 times per minute. Acupuncture was conducted for 4 consecutive weeks, five times per week, on weekdays. Resting-state functional magnetic resonance imaging indicated that connections between cognition-related regions such as the insula, dorsolateral prefrontal cortex, hippocampus, thalamus, inferior parietal lobule, and anterior cingulate cortex increased after acupuncture at Tiaoshen Yizhi acupoints. The insula, dorsolateral prefrontal cortex, and hippocampus acted as central brain hubs. Patients in the Tiaoshen Yizhi group exhibited improved cognitive performance after acupuncture. In the sham acupoint acupuncture group, connections between brain regions were dispersed, and we found no differences in cognitive function following the treatment. These results indicate that acupuncture at Tiaoshen Yizhi acupoints can regulate brain networks by increasing connectivity between cognition-related regions, thereby improving cognitive function in patients with mild cognitive impairment. 展开更多
关键词 nerve regeneration mild cognitive impairment Alzheimer's disease neuroimaging resting-state functional magnetic resonance imaging brain network acupuncture Tiaoshen Yizhi neural regeneration
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Sex Differences in Reconstructed Resting-State Functional Brain Networks for Children
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作者 Xianglai Yang Han Zhang 《Journal of Biosciences and Medicines》 2020年第12期166-177,共12页
Neuroscience studies have demonstrated that functional differences in human brains between males and females might result in their cognitive and psychological distinctions. To investigate sex differences in resting-st... Neuroscience studies have demonstrated that functional differences in human brains between males and females might result in their cognitive and psychological distinctions. To investigate sex differences in resting-state functional networks for children, the functional brain networks of two groups including boys and girls were reconstructed by functional connectivity with significant between-group differences respectively based on two brain atlases, and then the reconstructed functional networks were compared from the viewpoint of small-world properties. The functional brain networks of the two groups both displayed topological properties of the small-world network based on different brain atlases but exhibited some sex differences in certain measures. Specifically, for the automated anatomical labeling atlas, compared with girls, boys showed stronger small-world properties and higher ability of local information processing in brain networks;for the Harvard Oxford Atlas, the shortest path length of boys increased, indicating poorer performance in both global information transmission and resistance to the random attack. 展开更多
关键词 Sex Difference Functional Connectivity brain Network FMRI
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Structural and functional connectivity of the whole brain and subnetworks in individuals with mild traumatic brain injury:predictors of patient prognosis
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作者 Sihong Huang Jungong Han +4 位作者 Hairong Zheng Mengjun Li Chuxin Huang Xiaoyan Kui Jun Liu 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第7期1553-1558,共6页
Patients with mild traumatic brain injury have a diverse clinical presentation,and the underlying pathophysiology remains poorly understood.Magnetic resonance imaging is a non-invasive technique that has been widely u... Patients with mild traumatic brain injury have a diverse clinical presentation,and the underlying pathophysiology remains poorly understood.Magnetic resonance imaging is a non-invasive technique that has been widely utilized to investigate neuro biological markers after mild traumatic brain injury.This approach has emerged as a promising tool for investigating the pathogenesis of mild traumatic brain injury.G raph theory is a quantitative method of analyzing complex networks that has been widely used to study changes in brain structure and function.However,most previous mild traumatic brain injury studies using graph theory have focused on specific populations,with limited exploration of simultaneous abnormalities in structural and functional connectivity.Given that mild traumatic brain injury is the most common type of traumatic brain injury encounte red in clinical practice,further investigation of the patient characteristics and evolution of structural and functional connectivity is critical.In the present study,we explored whether abnormal structural and functional connectivity in the acute phase could serve as indicators of longitudinal changes in imaging data and cognitive function in patients with mild traumatic brain injury.In this longitudinal study,we enrolled 46 patients with mild traumatic brain injury who were assessed within 2 wee ks of injury,as well as 36 healthy controls.Resting-state functional magnetic resonance imaging and diffusion-weighted imaging data were acquired for graph theoretical network analysis.In the acute phase,patients with mild traumatic brain injury demonstrated reduced structural connectivity in the dorsal attention network.More than 3 months of followup data revealed signs of recovery in structural and functional connectivity,as well as cognitive function,in 22 out of the 46 patients.Furthermore,better cognitive function was associated with more efficient networks.Finally,our data indicated that small-worldness in the acute stage could serve as a predictor of longitudinal changes in connectivity in patients with mild traumatic brain injury.These findings highlight the importance of integrating structural and functional connectivity in unde rstanding the occurrence and evolution of mild traumatic brain injury.Additionally,exploratory analysis based on subnetworks could serve a predictive function in the prognosis of patients with mild traumatic brain injury. 展开更多
关键词 cognitive function CROSS-SECTION FOLLOW-UP functional connectivity graph theory longitudinal study mild traumatic brain injury prediction small-worldness structural connectivity subnetworks whole brain network
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Assessing target optical camouflage effects using brain functional networks:A feasibility study
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作者 Zhou Yu Li Xue +4 位作者 Weidong Xu Jun Liu Qi Jia Jianghua Hu Jidong Wu 《Defence Technology(防务技术)》 SCIE EI CAS CSCD 2024年第4期69-77,共9页
Brain functional networks model the brain's ability to exchange information across different regions,aiding in the understanding of the cognitive process of human visual attention during target searching,thereby c... Brain functional networks model the brain's ability to exchange information across different regions,aiding in the understanding of the cognitive process of human visual attention during target searching,thereby contributing to the advancement of camouflage evaluation.In this study,images with various camouflage effects were presented to observers to generate electroencephalography(EEG)signals,which were then used to construct a brain functional network.The topological parameters of the network were subsequently extracted and input into a machine learning model for training.The results indicate that most of the classifiers achieved accuracy rates exceeding 70%.Specifically,the Logistic algorithm achieved an accuracy of 81.67%.Therefore,it is possible to predict target camouflage effectiveness with high accuracy without the need to calculate discovery probability.The proposed method fully considers the aspects of human visual and cognitive processes,overcomes the subjectivity of human interpretation,and achieves stable and reliable accuracy. 展开更多
关键词 Camouflage effect evaluation Electroencephalography(EEG) brain functional networks Machine learning
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Effect of cognitive training on brain dynamics
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作者 吕贵阳 徐天勇 +3 位作者 陈飞燕 朱萍 王淼 何国光 《Chinese Physics B》 SCIE EI CAS CSCD 2024年第2期529-536,共8页
The human brain is highly plastic.Cognitive training is usually used to modify functional connectivity of brain networks.Moreover,the structures of brain networks may determine its dynamic behavior which is related to... The human brain is highly plastic.Cognitive training is usually used to modify functional connectivity of brain networks.Moreover,the structures of brain networks may determine its dynamic behavior which is related to human cognitive abilities.To study the effect of functional connectivity on the brain dynamics,the dynamic model based on functional connections of the brain and the Hindmarsh–Rose model is utilized in this work.The resting-state fMRI data from the experimental group undergoing abacus-based mental calculation(AMC)training and from the control group are used to construct the functional brain networks.The dynamic behavior of brain at the resting and task states for the AMC group and the control group are simulated with the above-mentioned dynamic model.In the resting state,there are the differences of brain activation between the AMC group and the control group,and more brain regions are inspired in the AMC group.A stimulus with sinusoidal signals to brain networks is introduced to simulate the brain dynamics in the task states.The dynamic characteristics are extracted by the excitation rates,the response intensities and the state distributions.The change in the functional connectivity of brain networks with the AMC training would in turn improve the brain response to external stimulus,and make the brain more efficient in processing tasks. 展开更多
关键词 brian dynamics functional brain networks cognitive training abacus-based mental calculation
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Brain Functional Networks with Dynamic Hypergraph Manifold Regularization for Classification of End-Stage Renal Disease Associated with Mild Cognitive Impairment
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作者 Zhengtao Xi Chaofan Song +2 位作者 Jiahui Zheng Haifeng Shi Zhuqing Jiao 《Computer Modeling in Engineering & Sciences》 SCIE EI 2023年第6期2243-2266,共24页
The structure and function of brain networks have been altered in patients with end-stage renal disease(ESRD).Manifold regularization(MR)only considers the pairing relationship between two brain regions and cannot rep... The structure and function of brain networks have been altered in patients with end-stage renal disease(ESRD).Manifold regularization(MR)only considers the pairing relationship between two brain regions and cannot represent functional interactions or higher-order relationships between multiple brain regions.To solve this issue,we developed a method to construct a dynamic brain functional network(DBFN)based on dynamic hypergraph MR(DHMR)and applied it to the classification of ESRD associated with mild cognitive impairment(ESRDaMCI).The construction of DBFN with Pearson’s correlation(PC)was transformed into an optimization model.Node convolution and hyperedge convolution superposition were adopted to dynamically modify the hypergraph structure,and then got the dynamic hypergraph to form the manifold regular terms of the dynamic hypergraph.The DHMR and L_(1) norm regularization were introduced into the PC-based optimization model to obtain the final DHMR-based DBFN(DDBFN).Experiment results demonstrated the validity of the DDBFN method by comparing the classification results with several related brain functional network construction methods.Our work not only improves better classification performance but also reveals the discriminative regions of ESRDaMCI,providing a reference for clinical research and auxiliary diagnosis of concomitant cognitive impairments. 展开更多
关键词 End-stage renal disease mild cognitive impairment brain functional network dynamic hypergraph manifold regularization CLASSIFICATION
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Aberrant single-subject morphological brain networks in first-episode,treatment-naive adolescents with major depressive disorder
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作者 Xiaofan Qiu Junle Li +8 位作者 Fen Pan Yuping Yang Weihua Zhou Jinkai Chen Ning Wei Shaojia Lu Xuchu Weng Manli Huang Jinhui Wang 《Psychoradiology》 2023年第1期220-231,共12页
Background:Neuroimaging-based connectome studies have indicated that major depressive disorder(MDD)is associated with dis-rupted topological organization of large-scale brain networks.However,the disruptions and their... Background:Neuroimaging-based connectome studies have indicated that major depressive disorder(MDD)is associated with dis-rupted topological organization of large-scale brain networks.However,the disruptions and their clinical and cognitive relevance are not well established for morphological brain networks in adolescent MDD.Objective:To investigate the topological alterations of single-subject morphological brain networks in adolescent MDD.Methods:Twenty-five first-episode,treatment-naive adolescents with MDD and 19 healthy controls(HCs)underwent T1-weighted magnetic resonance imaging and a battery of neuropsychological tests.Single-subject morphological brain networks were constructed separately based on cortical thickness,fractal dimension,gyrification index,and sulcus depth,and topologically characterized by graph-based approaches.Between-group differences were inferred by permutation testing.For significant alterations,partial correla-tions were used to examine their associations with clinical and neuropsychological variables in the patients.Finally,a support vector machine was used to classify the patients from controls.Results:Compared with the HCs,the patients exhibited topological alterations only in cortical thickness-based networks character-ized by higher nodal centralities in parietal(left primary sensory cortex)but lower nodal centralities in temporal(left parabelt complex,right perirhinal ectorhinal cortex,right area PHT and right ventral visual complex)regions.Moreover,decreased nodal centralities of some temporal regions were correlated with cognitive dysfunction and clinical characteristics of the patients.These results were largely reproducible for binary and weighted network analyses.Finally,topological properties of the cortical thickness-based net-works were able to distinguish the MDD adolescents from HCs with 87.6%accuracy.Conclusion:Adolescent MDD is associated with disrupted topological organization of morphological brain networks,and the disrup-tions provide potential biomarkers for diagnosing and monitoring the disease. 展开更多
关键词 adolescent major depressive disorder structural MRI morphological brain network cortical thickness support vector machine
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Epileptic brain network mechanisms and neuroimaging techniques for the brain network
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作者 Yi Guo Zhonghua Lin +1 位作者 Zhen Fan Xin Tian 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第12期2637-2648,共12页
Epilepsy can be defined as a dysfunction of the brain network,and each type of epilepsy involves different brain-network changes that are implicated diffe rently in the control and propagation of interictal or ictal d... Epilepsy can be defined as a dysfunction of the brain network,and each type of epilepsy involves different brain-network changes that are implicated diffe rently in the control and propagation of interictal or ictal discharges.Gaining more detailed information on brain network alterations can help us to further understand the mechanisms of epilepsy and pave the way for brain network-based precise therapeutic approaches in clinical practice.An increasing number of advanced neuroimaging techniques and electrophysiological techniques such as diffusion tensor imaging-based fiber tra ctography,diffusion kurtosis imaging-based fiber tractography,fiber ball imagingbased tra ctography,electroencephalography,functional magnetic resonance imaging,magnetoencephalography,positron emission tomography,molecular imaging,and functional ultrasound imaging have been extensively used to delineate epileptic networks.In this review,we summarize the relevant neuroimaging and neuroelectrophysiological techniques for assessing structural and functional brain networks in patients with epilepsy,and extensively analyze the imaging mechanisms,advantages,limitations,and clinical application ranges of each technique.A greater focus on emerging advanced technologies,new data analysis software,a combination of multiple techniques,and the construction of personalized virtual epilepsy models can provide a theoretical basis to better understand the brain network mechanisms of epilepsy and make surgical decisions. 展开更多
关键词 electrophysiological techniques EPILEPSY functional brain network functional magnetic resonance imaging functional near-infrared spectroscopy machine leaning molecular imaging neuroimaging techniques structural brain network virtual epileptic models
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Functional organization of complex brain networks modulated by acupuncture at different acupoints belonging to the same anatomic segment 被引量:12
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作者 CHEN Shang-jie MENG Lan +6 位作者 YAN Hao BAI Li-jun WANG Fang HUANG Yong LI Jian-ping PENG Xu-ming SHI Xue-min 《Chinese Medical Journal》 SCIE CAS CSCD 2012年第15期2694-2700,共7页
Background Noninvasive functional magnetic resonance imaging (fMRI) techniques have opened a "window" into the brain, allowing us to investigate the anatomical and physiological function involving acupuncture need... Background Noninvasive functional magnetic resonance imaging (fMRI) techniques have opened a "window" into the brain, allowing us to investigate the anatomical and physiological function involving acupuncture needling. Imaging its sustained effect rather than acute effect on the brain networks may further help elucidate the mechanisms by which acupuncture achieves its therapeutic effects. In this study, we aimed to investigate the functional brain networks during the post-resting state following acupuncture at KI3 in comparison with acupuncture at GB40. Methods Needling at acupoints GB40 and KI3 was performed in twelve subjects. Six minutes of scanning at rest were adopted before and after acupuncture at different acupoints. Then we divided the whole brain into 39 regions and constructed functional brain networks during the post-acupuncture resting states (PARS). Results For direct comparisons, increased correlations during post-resting state following acupuncture at KI3 compared to resting state (RS) were primarily located between the dorsolateral prefrontal cortex (DLPFC) and post temporal cortex, ventromedial prefrontal cortex (vmPFC) and post temporal cortex. These brain regions were all cognitive-related functions. In contrast, the increased connections between the anterior insula and temporal cortex mainly emerged following acupuncture at GB40 compared with the RS. Conclusions The present study demonstrates that acupuncture at different acupoints belonging to the same anatomic segment can exert different modulatory effects on the reorganizations of post-acupuncture RS networks. The heterogeneous modulation patterns between twoconditions may relate to the functional specific modulatory effects of acupuncture. 展开更多
关键词 ACUPUNCTURE functional magnetic resonance imaging complex brain networks
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Motor imagery training induces changes in brain neural networks in stroke patients 被引量:14
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作者 Fang Li Tong Zhang +3 位作者 Bing-Jie Li Wei Zhang Jun Zhao Lu-Ping Song 《Neural Regeneration Research》 SCIE CAS CSCD 2018年第10期1771-1781,共11页
Motor imagery is the mental representation of an action without overt movement or muscle activation. However, the effects of motor imagery on stroke-induced hand dysfunction and brain neural networks are still unknown... Motor imagery is the mental representation of an action without overt movement or muscle activation. However, the effects of motor imagery on stroke-induced hand dysfunction and brain neural networks are still unknown. We conducted a randomized controlled trial in the China Rehabilitation Research Center. Twenty stroke patients, including 13 males and 7 females, 32–51 years old, were recruited and randomly assigned to the traditional rehabilitation treatment group(PP group, n = 10) or the motor imagery training combined with traditional rehabilitation treatment group(MP group, n = 10). All patients received rehabilitation training once a day, 45 minutes per session, five times per week, for 4 consecutive weeks. In the MP group, motor imagery training was performed for 45 minutes after traditional rehabilitation training, daily. Action Research Arm Test and the Fugl-Meyer Assessment of the upper extremity were used to evaluate hand functions before and after treatment. Transcranial magnetic stimulation was used to analyze motor evoked potentials in the affected extremity. Diffusion tensor imaging was used to assess changes in brain neural networks. Compared with the PP group, the MP group showed better recovery of hand function, higher amplitude of the motor evoked potential in the abductor pollicis brevis, greater fractional anisotropy of the right dorsal pathway, and an increase in the fractional anisotropy of the bilateral dorsal pathway. Our findings indicate that 4 weeks of motor imagery training combined with traditional rehabilitation treatment improves hand function in stroke patients by enhancing the dorsal pathway. This trial has been registered with the Chinese Clinical Trial Registry(registration number: Chi CTR-OCH-12002238). 展开更多
关键词 nerve regeneration STROKE hand function motor imagery brain neural network motion evoked potential dorsal pathway ventral pathway diffusion tensor imaging neural regeneration
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Link Prediction in Brain Networks Based on a Hierarchical Random Graph Model 被引量:4
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作者 Yanli Yang Hao Guo +1 位作者 Tian Tian Haifang Li 《Tsinghua Science and Technology》 SCIE EI CAS CSCD 2015年第3期306-315,共10页
Link prediction attempts to estimate the likelihood of the existence of links between nodes based on available brain network information, such as node attributes and observed links. In response to the problem of the p... Link prediction attempts to estimate the likelihood of the existence of links between nodes based on available brain network information, such as node attributes and observed links. In response to the problem of the poor efficiency of general link prediction methods applied to brain networks, this paper proposes a hierarchical random graph model based on maximum likelihood estimation. This algorithm uses brain network data to create a hierarchical random graph model. Then, it samples the space of all possible dendrograms using a Markov-chain Monte Carlo algorithm. Finally, it calculates the average connection probability. It also employs an evaluation index. Comparing link prediction in a brain network with link prediction in three different networks (Treponemapallidum metabolic network, terrorist networks, and grassland species food webs) using the hierarchical random graph model, experimental results show that the algorithm applied to the brain network has the highest prediction accuracy in terms of AUC scores. With the increase of network scale, AUC scores of the brain network reach 0.8 before gradually leveling off. In addition, the results show AUC scores of various algorithms computed in networks of eight different scales in 28 normal people. They show that the HRG algorithm is far better than random prediction and the ACT global index, and slightly inferior to local indexes CN and LP. Although the HRG algorithm does not produce the best results, its forecast effect is obvious, and shows good time complexity. 展开更多
关键词 brain network link prediction hierarchical random graph maximum likelihood estimation method
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Scopolamine causes delirium-like brain network dysfunction and reversible cognitive impairment without neuronal loss 被引量:1
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作者 Qing Wang Xiang Zhang +10 位作者 Yu-Jie Guo Ya-Yan Pang Jun-Jie Li Yan-Li Zhao Jun-Fen Wei Bai-Ting Zhu Jing-Xiang Tang Yang-Yang Jiang Jie Meng Ji-Rong Yue Peng Lei 《Zoological Research》 SCIE CSCD 2023年第4期712-724,共13页
Delirium is a severe acute neuropsychiatric syndrome that commonly occurs in the elderly and is considered an independent risk factor for later dementia.However,given its inherent complexity,few animal models of delir... Delirium is a severe acute neuropsychiatric syndrome that commonly occurs in the elderly and is considered an independent risk factor for later dementia.However,given its inherent complexity,few animal models of delirium have been established and the mechanism underlying the onset of delirium remains elusive.Here,we conducted a comparison of three mouse models of delirium induced by clinically relevant risk factors,including anesthesia with surgery(AS),systemic inflammation,and neurotransmission modulation.We found that both bacterial lipopolysaccharide(LPS)and cholinergic receptor antagonist scopolamine(Scop)induction reduced neuronal activities in the delirium-related brain network,with the latter presenting a similar pattern of reduction as found in delirium patients.Consistently,Scop injection resulted in reversible cognitive impairment with hyperactive behavior.No loss of cholinergic neurons was found with treatment,but hippocampal synaptic functions were affected.These findings provide further clues regarding the mechanism underlying delirium onset and demonstrate the successful application of the Scop injection model in mimicking delirium-like phenotypes in mice. 展开更多
关键词 DELIRIUM SCOPOLAMINE Cholinergic neuron Neuronal activity brain network
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Extracting Sub-Networks from Brain Functional Network Using Graph Regularized Nonnegative Matrix Factorization
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作者 Zhuqing Jiao Yixin Ji +1 位作者 Tingxuan Jiao Shuihua Wang 《Computer Modeling in Engineering & Sciences》 SCIE EI 2020年第5期845-871,共27页
Currently,functional connectomes constructed from neuroimaging data have emerged as a powerful tool in identifying brain disorders.If one brain disease just manifests as some cognitive dysfunction,it means that the di... Currently,functional connectomes constructed from neuroimaging data have emerged as a powerful tool in identifying brain disorders.If one brain disease just manifests as some cognitive dysfunction,it means that the disease may affect some local connectivity in the brain functional network.That is,there are functional abnormalities in the sub-network.Therefore,it is crucial to accurately identify them in pathological diagnosis.To solve these problems,we proposed a sub-network extraction method based on graph regularization nonnegative matrix factorization(GNMF).The dynamic functional networks of normal subjects and early mild cognitive impairment(eMCI)subjects were vectorized and the functional connection vectors(FCV)were assembled to aggregation matrices.Then GNMF was applied to factorize the aggregation matrix to get the base matrix,in which the column vectors were restored to a common sub-network and a distinctive sub-network,and visualization and statistical analysis were conducted on the two sub-networks,respectively.Experimental results demonstrated that,compared with other matrix factorization methods,the proposed method can more obviously reflect the similarity between the common subnetwork of eMCI subjects and normal subjects,as well as the difference between the distinctive sub-network of eMCI subjects and normal subjects,Therefore,the high-dimensional features in brain functional networks can be best represented locally in the lowdimensional space,which provides a new idea for studying brain functional connectomes. 展开更多
关键词 brain functional network sub-network functional connectivity graph regularized nonnegative matrix factorization(GNMF) aggregation matrix
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Kernel based statistic: identifying topological differences in brain networks
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作者 Kai Ma Wei Shao +1 位作者 Qi Zhu Daoqiang Zhang 《Intelligent Medicine》 2022年第1期30-40,共11页
Background Brain network describing interconnections between brain regions contains abundant topological information.It is a challenge for the existing statistical methods(e.g.,t test)to investigate the topological di... Background Brain network describing interconnections between brain regions contains abundant topological information.It is a challenge for the existing statistical methods(e.g.,t test)to investigate the topological differences of brain networks.Methods We proposed a kernel based statistic framework for identifying topological differences in brain networks.In our framework,the topological similarities between paired brain networks were measured by graph kernels.Then,graph kernels are embedded into maximum mean discrepancy for calculating kernel based test statistic.Based on this test statistic,we adopted conditional Monte Carlo simulation to compute the statistical significance(i.e.,P value)and statistical power.We recruited 33 patients with Alzheimer’s disease(AD),33 patients with early mild cognitive impairment(EMCI),33 patients with late mild cognitive impairment(LMCI)and 33 normal controls(NC)in our experiment.There are no statistical differences in demographic information between patients and NC.The compared state-of-the-art statistical methods include t test,t squared test,two-sample permutation test and non-normal test.Results We applied the proposed shortest path matched kernel to our framework for investigating the statistical differences of shortest path topological structures in brain networks of AD and NC.We compared our method with the existing state-of-the-art statistical methods in brain network characteristic including clustering coefficient and functional connection among EMCI,LMCI,AD,and NC.The results indicate that our framework can capture the statistically discriminative shortest path topological structures,such as shortest path from right rolandic operculum to right supplementary motor area(P=0.00314,statistical power=0.803).In clustering coefficient and functional connection,our framework outperforms the state-of-the-art statistical methods,such as P=0.0013 and statistical power=0.83 in the analysis of AD and NC.Conclusion Our proposed kernel based statistic framework not only can be used to investigate the topological differences of brain network,but also can be used to investigate the static characteristics(e.g.,clustering coefficient and functional connection)of brain network. 展开更多
关键词 brain network Conditional monte carlo Graph kernel Statistical analysis Topological difference
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Progress of Brain Network Studies on Anesthesia and Consciousness: Framework and Clinical Applications
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作者 Jun Liu Kangli Dong +8 位作者 Yi Sun Ioannis Kakkos Fan Huang Guozheng Wang Peng Qi Xing Chen Delin Zhang Anastasios Bezerianos Yu Sun 《Engineering》 SCIE EI CAS CSCD 2023年第1期77-95,共19页
Although the relationship between anesthesia and consciousness has been investigated for decades, our understanding of the underlying neural mechanisms of anesthesia and consciousness remains rudimentary, which limits... Although the relationship between anesthesia and consciousness has been investigated for decades, our understanding of the underlying neural mechanisms of anesthesia and consciousness remains rudimentary, which limits the development of systems for anesthesia monitoring and consciousness evaluation. Moreover, the current practices for anesthesia monitoring are mainly based on methods that do not provide adequate information and may present obstacles to the precise application of anesthesia. Most recently, there has been a growing trend to utilize brain network analysis to reveal the mechanisms of anesthesia, with the aim of providing novel insights to promote practical application. This review summarizes recent research on brain network studies of anesthesia, and compares the underlying neural mechanisms of consciousness and anesthesia along with the neural signs and measures of the distinct aspects of neural activity. Using the theory of cortical fragmentation as a starting point, we introduce important methods and research involving connectivity and network analysis. We demonstrate that whole-brain multimodal network data can provide important supplementary clinical information. More importantly, this review posits that brain network methods, if simplified, will likely play an important role in improving the current clinical anesthesia monitoring systems. 展开更多
关键词 ANESTHESIA brain network CONNECTIVITY Graph theoretical analysis Clinical monitoring system
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Brain Functional Network Based on Small-Worldness and Minimum Spanning Tree for Depression Analysis
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作者 Bingtao Zhang Dan Wei +1 位作者 Yun Su Zhonglin Zhang 《Journal of Beijing Institute of Technology》 EI CAS 2023年第2期198-208,共11页
Since the outbreak and spread of corona virus disease 2019(COVID-19),the prevalence of mental disorders,such as depression,has continued to increase.To explore the abnormal changes of brain functional connections in p... Since the outbreak and spread of corona virus disease 2019(COVID-19),the prevalence of mental disorders,such as depression,has continued to increase.To explore the abnormal changes of brain functional connections in patients with depression,this paper proposes a depression analysis method based on brain function network(BFN).To avoid the volume conductor effect,BFN was constructed based on phase lag index(PLI).Then the indicators closely related to depression were selected from weighted BFN based on small-worldness(SW)characteristics and binarization BFN based on the minimum spanning tree(MST).Differences analysis between groups and correlation analysis between these indicators and diagnostic indicators were performed in turn.The resting state electroencephalogram(EEG)data of 24 patients with depression and 29 healthy controls(HC)was used to verify our proposed method.The results showed that compared with HC,the information processing of BFN in patients with depression decreased,and BFN showed a trend of randomization. 展开更多
关键词 DEPRESSION brain function network(BFN) small-worldness(SW) minimum spanning tree(MST)
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Changes in brain functional network connectivity after stroke 被引量:3
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作者 Wei Li Yapeng Li +1 位作者 Wenzhen Zhu Xi Chen 《Neural Regeneration Research》 SCIE CAS CSCD 2014年第1期51-60,共10页
Studies have shown that functional network connection models can be used to study brain net- work changes in patients with schizophrenia. In this study, we inferred that these models could also be used to explore func... Studies have shown that functional network connection models can be used to study brain net- work changes in patients with schizophrenia. In this study, we inferred that these models could also be used to explore functional network connectivity changes in stroke patients. We used independent component analysis to find the motor areas of stroke patients, which is a novel way to determine these areas. In this study, we collected functional magnetic resonance imaging datasets from healthy controls and right-handed stroke patients following their first ever stroke. Using independent component analysis, six spatially independent components highly correlat- ed to the experimental paradigm were extracted. Then, the functional network connectivity of both patients and controls was established to observe the differences between them. The results showed that there were 11 connections in the model in the stroke patients, while there were only four connections in the healthy controls. Further analysis found that some damaged connections may be compensated for by new indirect connections or circuits produced after stroke. These connections may have a direct correlation with the degree of stroke rehabilitation. Our findings suggest that functional network connectivity in stroke patients is more complex than that in hea- lthy controls, and that there is a compensation loop in the functional network following stroke. This implies that functional network reorganization plays a very important role in the process of rehabilitation after stroke. 展开更多
关键词 nerve regeneration brain injury STROKE motor areas functional magnetic resonanceimaging brain network independent component analysis functional network connectivity neuralplasticity NSFC grant neural regeneration
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Analysis of a phase synchronized functional network based on the rhythm of brain activities 被引量:2
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作者 李凌 金贞兰 李斌 《Chinese Physics B》 SCIE EI CAS CSCD 2011年第3期512-518,共7页
Rhythm of brain activities represents oscillations of postsynaptic potentials in neocortex, therefore it can serve as an indicator of the brain activity state. In order to check the connectivity of brain rhythm, this ... Rhythm of brain activities represents oscillations of postsynaptic potentials in neocortex, therefore it can serve as an indicator of the brain activity state. In order to check the connectivity of brain rhythm, this paper develops a new method of constructing functional network based on phase synchronization. Electroencephalogram (EEG) data were collected while subjects looking at a green cross in two states, performing an attention task and relaxing with eyes-open. The EEG from these two states was filtered by three band-pass filters to obtain signals of theta (4-7 Hz), alpha (8-13 Hz) and beta (14-30 Hz) bands. Mean resultant length was used to estimate strength of phase synchronization in three bands to construct networks of both states, and mean degree K and cluster coefficient C of networks were calculated as a function of threshold. The result shows higher cluster coetticient in the attention state than in the eyes-open state in all three bands, suggesting that cluster coefficient reflects brain state. In addition, an obvious fronto-parietal network is found in the attention state, which is a well-known attention network. These results indicate that attention modulates the fronto-parietal connectivity in different modes as compared with the eyes-open state. Taken together this method is an objective and important tool to study the properties of neural networks of brain rhythm, 展开更多
关键词 ELECTROENCEPHALOGRAM phase synchronization RHYTHM functional brain network
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Brain functional remodeling caused by sciatic nerve transposition repair in rats identified by multiplemodel resting-state blood oxygenation level-dependent functional magnetic resonance imaging analysis 被引量:1
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作者 Yu-Song Yuan Hai-Lin Xu +3 位作者 Zhong-Di Liu Yu-Hui Kou Bo Jin Pei-Xun Zhang 《Neural Regeneration Research》 SCIE CAS CSCD 2022年第2期418-426,共9页
Lower extremity nerve transposition repair has become an important treatment strategy for peripheral nerve injury;however, brain changes caused by this surgical procedure remain unclear. In this study, the distal stum... Lower extremity nerve transposition repair has become an important treatment strategy for peripheral nerve injury;however, brain changes caused by this surgical procedure remain unclear. In this study, the distal stump of the right sciatic nerve in a rat model of sciatic nerve injury was connected to the proximal end of the left sciatic nerve using a chitin conduit. Neuroelectrophysiological test showed that the right lower limb displayed nerve conduction, and the structure of myelinated nerve fibers recovered greatly. Muscle wet weight of the anterior tibialis and gastrocnemius recovered as well. Multiple-model resting-state blood oxygenation level-dependent functional magnetic resonance imaging analysis revealed functional remodeling in multiple brain regions and the re-establishment of motor and sensory functions through a new reflex arc. These findings suggest that sciatic nerve transposition repair induces brain functional remodeling. The study was approved by the Ethics Committee of Peking University People's Hospital on December 9, 2015(approval No. 2015-50). 展开更多
关键词 brain connectivity brain network fALFF MRI nerve transposition repair peripheral nerve injury ReHo REMODELING
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