Differences in carbon source usage by dental plaque in children with and without early childhood caries

Early childhood caries （ECC） is a considerable pediatric and public health problem worldwide. Preceding studies have focused primarily on bacterial diversity at the taxonomic level. Although these studies have provided significant information regarding the connection between dental caries and oral micmbiomes, further comprehension of this microbial community＇s ecological relevance is limited. This study identified the carbon source metabolic differences in dental plaque between children with and without ECC. We compared the microbial community functional diversity in 18 caries-free subjects with 18 severe ECC patients based on sole carbon source usage using a Biolog assay. The anaerobic microbial community in the ECC patients displayed greater metabolic activity than that of the control group. Specific carbon source metabolism differed significantly between the two groups. Subjects from the two groups were well distinguished by cluster and principal component analyses based on discriminative carbon sources. Our results implied that the microbial functional diversity between the ECC patients and healthy subjects differed significantly. In addition, the Biolog assay furthered our understanding of oral microbiomes as a composite of functional abilities, thus enabling us to identify the ecologically relevant functional differences among oral microbial communities.

Functional diversity of soil microbial communities in response to supplementing 50% of the mineral N fertilizer with organic fertilizer in an oat field

The effects of supplementing 50%of the mineral N fertilizer with organic fertilizer on the metabolism and diversity of soil microbial communities in an oat field were investigated using Biolog-Eco plates.The experiment consisted of five treatments:no fertilizer(CK),mineral N fertilizer applied at 90 and 45 kg ha^(-1) N in the form of urea(U1 and U2,respectively),and U2 supplemented with organic fertilizer in the form of sheep manure at 90 and 45 kg ha^(-1) N(U2OM1 and U2OM2,respectively).Each treatment had three replications.The experiment was conducted in 2018 and 2019 in Pinglu District,Shanxi Province,China.The carbon source utilization by soil microbial communities,such as amino acids,amines,carbohydrates,carboxylic acids,and polymers,increased when 50%of the mineral N fertilizer was replaced with organic fertilizer in both years.This result was accompanied by increased richness,dominance,and evenness of the microbial communities.The utilization of amino acid,amine,and carboxylic acid carbon sources and community evenness were further improved when the organic fertilizer amount was doubled in both years.Biplot analysis indicated that amines and amino acids were the most representative of the total carbon source utilization by the soil microbial communities in both years.The highest oat yield was achieved at a total N application rate of 135 kg ha^(-1) in the treatment involving 45 kg ha^(-1) N in the form of urea and 90 kg ha^(-1) N in the form of sheep manure in both years.It was concluded that the application of 50%of the conventional rate of mineral N fertilizer supplemented with an appropriate rate of organic fertilizer enhanced both the functional diversity of soil microbial communities and oat yield.Amine and amino acid carbon sources may be used as a substitute for total carbon sources for assessing total carbon source utilization by soil microbial communities in oat fields in future studies.

Changes of Soil Microbiological Characteristics After Solidago canadensis L. Invasion

The relationship between Solidago canadensis L. invasion and soil microbial communities was studied across the invasive gradients varying from 0 to 40, 80, and 100% coverage of S. canadensis. The results showed both soil microbial biomass C （Cmic） and N （Nmic） increased as the coverage of S. canadensis increased. Soil microbial quotient Cmic/Corg （microbial biomass C/organic C） tended to increase linearly with the coverage of S. canadensis. Soil basal respiration （BR） also showed a similar trend. The soil respiratory quotient qCO2 decreased with S. canadensis invasion, and remained at quite a constantly low level in the invasive soils. Sole carbon source utilization profiles analyses indicated that S. canadensis invasion tended to result in higher microbial functional diversity in the soil. Average utilization of specific substrate guilds was highest in the soil with S. canadensis monoculture. Principle component analysis of sole carbon source utilization profiles further indicated that microbial functional diversity in the soil with S. canadensis monoculture was distinctly separated from those soils in the native area and the ecotones. In conclusion, S. canadensis invasion improved soil microbial biomass, respiration and utilization of carbon sources, and decreased qCO2, thus created better soil conditions, which in turn were more conducive to the growth of S. canadensis.

Optimization of C/N ratio preparation of protein-rich and multi-enzymes feed thallus through synergic fermentation of mixed distillers'grains

A new procedure of determining optimal C/N (the rate of carbon source to nitrogen source) of mixed distillers' grains for combined bacteria synergic fermentation is established. At the same time an improved method evaluating bacteria growth, called method of dry cell weighing by filtering is developed. For each combination of C and N, their initial and residual contents before and after fermentation respectively are determined. Then followed the calculation of utilization of C and N sources by the compound bacteria. The optimal C/N is finally located from among the utilization of C and N of several combinations and the weight of produced mass of oven dried thallus. The conditions of fermentation are: inoculum size 10%, temperature 30 0℃, rotational speed 170 r/min, shake culture time 48h. The best results obtained from orthogonal experiments are: maximum mass of oven dried thallus is 14 693g in a liter liquid medium, maximum utilization rate of carbon source is 98 13% and maximum utilization rate of nitrogen is 78 14%. Optimal C/N is 5 1.

In-situ sludge reduction based on Mn^(2+)-catalytic ozonation conditioning:Feasibility study and microbial mechanisms

To improve the sludge conditioning efficiency without increasing the ozone dose,an in-situ sludge reduction process based on Mn^(2+)-catalytic ozonation conditioning was proposed.Using ozone conditioning alone as a control,a lab-scale sequencing batch reactor coupled with ozonated sludge recycle was evaluated for its operating performance at an ozone dose of 75 mg O_(3)/g VSS and 1.5 mmol/L Mn^(2+)addition.The results showed a 39.4%reduction in MLSS and an observed sludge yield of 0.236 kg MLSS/kg COD for the O_(3)+Mn^(2+)group compared to the O_(3)group (15.3%and 0.292 kg MLSS/kg COD),accompanied by better COD,NH_(4)^(+)-N,TN and TP removal,improved effluent SS and limited impact on excess sludge properties.Subsequently,activity tests,BIOLOG ECO microplates and 16S rRNA sequencing were applied to elucidate the changing mechanisms of Mn^(2+)-catalytic ozonation related to microbial action:(1) Dehydrogenase activity reached a higher peak.(2) Microbial utilization of total carbon sources had an elevated effect,up to approximately 18%,and metabolic levels of six carbon sources were also increased,especially for sugars and amino acids most pronounced.(3) The abundance of Defluviicoccus under the phylum Proteobacteria was enhanced to 12.0%and dominated in the sludge,they had strong hydrolytic activity and metabolic capacity.Denitrifying bacteria of the genus Ferruginibacter also showed an abundance of 7.6%,they contributed to the solubilization and reduction of sludge biomass.These results could guide researchers to further reduce ozonation conditioning costs,improve sludge management and provide theoretical support.

Influence of CO_(2)/HCO_(3)^(-) on Microbial Communities in Two Karst Caves with High CO_(2)

There is limited knowledge about microbial communities and their ecological functions in karst caves with high CO_(2)concentrations.Here,we studied the microbial community compositions and functions in Shuiming Cave( "SMC",CO_(2)concentration 3 303 ppm) and Xueyu Cave( "XYC",CO_(2)concentration 8 753 ppm) using Illumina MiSeq high-throughput sequencing in combination with BIOLOG test.The results showed that Proteobacteria,Actinobacteria and Bacteroidetes were dominant phyla in these two caves,and Thaumarchaeota was the most abundant in the rock wall samples of SMC.The microbial diversity in the water samples decreased with increasing HCO_(3)^(-)concentration,and it was higher in XYC than that in SMC.The microbial community structures in the sediment and rock wall samples were quite different between the two caves.High concentrations of CO_(2)can reduce the microbial diversity on the rock walls in karst caves,probably through changing microbial preference for different types of carbon sources and decreasing the microbial utilization rate of carbon sources.These results expanded our understanding of microbial community and its response to environments in karst caves with high CO_(2).

Vertical variation in Vibrio community composition in Sansha Yongle Blue Hole and its ability to degrade macromolecules

With the advantages of wide distribution,fast growth,and broad metabolic spectrum to organic carbon compounds,Vibrio may play an important role in organic carbon cycling.However,the ecological roles of Vibrio in many marine environments have not been explored.Here,the world's deepest'blue hole',the Sansha Yongle Blue Hole(SYBH)in the South China Sea,which is a geographically semi-enclosed environment featuring unique chemical characters,was investigated.The abundance,diversity and carbon source utilization capability of Vibrio were studied by quantification and high-throughput sequencing of Vibrio specific 16S rRNA genes and cultivation methods.The abundance of Vibrio in water column of the SYBH ranged from 3.78×10^4 to 7.35×10^616S rRNA gene copies L_1.Free-living Vibrio was more abundant than particle-associated Vibrio(~1.20×10^6 versus-2.68×10^5 gene copies L_1),indicating that Vibrio prefers a free-living life style.The Vibrio assemblages showed clear vertical stratification and could be divided into three groups:aerobic-transition,middle anaerobic and bottom anaerobic zones.Dissolved oxygen(DO),temperature,pH and salinity were the main environmental factors affecting the abundance and community composition.Cultivated Vibrio demonstrated a degrading capability to various macromolecular substrates,including starch,Tween 20/40/80,DNA,gelatin,alginate,casein,chitin,lecithin,K-carrageenan,mannan,xylan and hyaluronic acid.This suggests that Vibrio could produce a variety of highly active extracellular enzymes.Our study provides new insights into the distribution pattern and possible role in carbon cycle of Vibrio in the unique environment of a"blue hole'.