Leachate Lithium Characteristics of Loess-paleosol Sequences on the Chinese Loess Plateau and their Paleoclimatic Significance

The geochemical components of the leachate from loess-paleosol deposits can provide information about climaterelated post-depositional processes.For example,leachate lithium([Li]_(leachate))is a potential paleoclimate proxy because lithium is a typical lithophile element that is readily adsorbed by clay minerals during weathering and pedogenesis,and thus stratigraphic variations in[Li]leachatecan reflect these processes.We investigated the[Li]leachatevalues of two loess-paleosols profiles(the Luochuan and Weinan sections),on a north-south climatic gradient on the Chinese Loess Plateau.Independent paleoclimate information was provided by measurements of magnetic susceptibility,grain size,Rb/Sr ratios,and clay mineral content.During the last glacial-interglacial period,[Li]leachateincreased from 0.39 to 1.97μg/g at Luochuan and from 0.67 to 2.45μg/g at Weinan,mainly due to increasing pedogenesis.Based on these results we developed a conceptual model to explain the variations in[Li]leachate,Li^(+)within loess layers is mainly derived from dust input and the decomposition of primary minerals,influenced by the East Asian winter monsoon,while in paleosol layers Li is mainly derived from clay mineral adsorption during pedogenic processes,influenced by the East Asian summer monsoon.

Paleo-environmental study on the growth of magnetotactic bacteria and precipitation of magnetosomes in Chinese loess-paleosol sequences

405 samples were collected from L5-S5-L6 in consideration of obvious variations in susceptibility of the geological sections, which are section Xifeng in Gansu Province and section Duanjiapo in Shaanxi Province for study of magnetotactic bacteria (MB) and magnetosomes (MS) in Chinese loess-paleosol sequences. MB in each sample were observed by TEM after being cultured under 8-18℃, room temperature (RT), 25℃, 26℃ and 30℃ conditions. In general, MB are distributed widely in loess-paleosol sequences, fewer in loess layers with predomination of vibriod in shape. However, there are more MB in paleosol layers with morphological varieties such as roddish, vibriod and occasionally approximately coccus. The magnetosomes (MS) in MB of paleosol are usually arranged in chains along the cells. It was also found that MB growth and MS formation are associated with the environment in which MB live. It can be inferred from the distributions of MB and MS that the paleoclimates fluctuated during the formation of

Automatic Keyphrase Extraction from Scientific Chinese Medical Abstracts Based on Character-Level Sequence Labeling

Purpose:Automatic keyphrase extraction(AKE)is an important task for grasping the main points of the text.In this paper,we aim to combine the benefits of sequence labeling formulation and pretrained language model to propose an automatic keyphrase extraction model for Chinese scientific research.Design/methodology/approach:We regard AKE from Chinese text as a character-level sequence labeling task to avoid segmentation errors of Chinese tokenizer and initialize our model with pretrained language model BERT,which was released by Google in 2018.We collect data from Chinese Science Citation Database and construct a large-scale dataset from medical domain,which contains 100,000 abstracts as training set,6,000 abstracts as development set and 3,094 abstracts as test set.We use unsupervised keyphrase extraction methods including term frequency(TF),TF-IDF,TextRank and supervised machine learning methods including Conditional Random Field(CRF),Bidirectional Long Short Term Memory Network(BiLSTM),and BiLSTM-CRF as baselines.Experiments are designed to compare word-level and character-level sequence labeling approaches on supervised machine learning models and BERT-based models.Findings:Compared with character-level BiLSTM-CRF,the best baseline model with F1 score of 50.16%,our character-level sequence labeling model based on BERT obtains F1 score of 59.80%,getting 9.64%absolute improvement.Research limitations:We just consider automatic keyphrase extraction task rather than keyphrase generation task,so only keyphrases that are occurred in the given text can be extracted.In addition,our proposed dataset is not suitable for dealing with nested keyphrases.Practical implications:We make our character-level IOB format dataset of Chinese Automatic Keyphrase Extraction from scientific Chinese medical abstracts(CAKE)publicly available for the benefits of research community,which is available at:https://github.com/possible1402/Dataset-For-Chinese-Medical-Keyphrase-Extraction.Originality/value:By designing comparative experiments,our study demonstrates that character-level formulation is more suitable for Chinese automatic keyphrase extraction task under the general trend of pretrained language models.And our proposed dataset provides a unified method for model evaluation and can promote the development of Chinese automatic keyphrase extraction to some extent.

A preliminary study of the quantitative couplingbetween loess-paleosol sequences and summermon soon changes

The Loess Plateau-Northeastern Tibetan Plateau in China is famous for its deep andcontmuous distributed loess, in which soils (developed from loess) vary gradually with differentbiological climates changing from subhumid to arid, which provide a natural proving ground forstUd}' the coupling of loess-paleosol and climatic changes quantitatively. Thirty-two sections weresampled (collected) for measuring chemical element contents, clay content (and other items) and 60sections were collected for carbonate analysis to establish transfer functions between pedogenesisand climate. Finally, we estimated the paleoclAnate (P/T) in the region with transfer functions,It isrevealed that the variation of paleocldriate reflected by transfer functions accorded closely with theclimatic pattern resulted from recent work. Specifically, it was about 140 ha BP that summermonsoon reached Lanzhou or further, paleosol S1 (equaling to MIS 5 in deep sea records) developedstrongly in a large scale, even touching upon northeanstern Tibetan Plateau. And, the estimated P/Tinformation also indicated the cold and humid period during 50-30 ka BP, mean annual Precipitationwas about 400-500 nun in Angutan recorded by mega-interstadial paleosol Sm.

Diversity and geographical distribution of haptophyte Phaeocystis in the Chinese seas based on metabarcoding analysis

Phaeocystis is an important bloom-forming species and over 100 blooms have occurred since 1997 along the Chinese coasts,while only the species P.globosa was described.In this project,a total of 246 phytoplankton samples collected from the Bohai Sea,the Yellow Sea,and the East China Sea in April 2021 were analyzed to evaluate the species diversity and geographical distribution of the genus Phaeocystis based on metabarcoding 18S r DNA sequence.Four described Phaeocystis species were recognized,including P.globosa,P.pouchetii,P.jahnii,and P.cordata,and each has distinguished geographical distribution characteristics.P.globosa was the most widespread and abundant species,and P.pouchetii was found in the Bohai Sea and the northern Yellow Sea with substantially elevated abundance.P.cordata was also a widespread species,but its abundance was relatively low,while P.jahnii gathered only in the southeastern East China Sea.Water temperature,phosphate as well as ammonium contents were found to be associated with the abundance of P.globosa,P.pouchetii,and P.jahnii significantly.Moreover,two uncharacterized Phaeocystis species were detected in the Chinese seas,indicating the diversity of the genus remains underestimated worldwide.

Comprehensive analysis of the full-length transcripts and alternative splicing involved in clubroot resistance in Chinese cabbage

Chinese cabbage is an economically important Brassica vegetable worldwide, and clubroot, which is caused by the soilborne protist plant pathogen Plasmodiophora brassicae is regarded as a destructive disease to Brassica crops. Previous studies on the gene transcripts related to Chinese cabbage resistance to clubroot mainly employed RNA-seq technology,although it cannot provide accurate transcript assembly and structural information. In this study, PacBio RS II SMRT sequencing was used to generate full-length transcriptomes of mixed roots at 0, 2, 5, 8, 13, and 22 days after P. brassicae infection in the clubroot-resistant line DH40R. Overall, 39 376 high-quality isoforms and 26 270 open reading frames(ORFs) were identified from the SMRT sequencing data. Additionally, 426 annotated long noncoding RNAs(lncRNAs),56 transcription factor(TF) families, 1 883 genes with poly(A) sites and 1 691 alternative splicing(AS) events were identified. Furthermore, 1 201 of the genes had at least one AS event in DH40R. A comparison with RNA-seq data revealed six differentially expressed AS genes(one for disease resistance and five for defensive response) that are potentially involved in P. brassicae resistance. The results of this study provide valuable resources for basic research on clubroot resistance in Chinese cabbage.

Magnetostratigraphy of a Loess-Paleosol Sequence from Higher Terrace of the Daduhe River in the Eastern Margin of the Tibetan Plateau and Its Geological Significance

The eolian deposits distributed in the river valleys in the eastern margin of the Tibetan Plateau （TP） are very useful in neotectonic and paleoclimatic studies. Firstly, the climate in the eastern margin of the TP is mainly controlled by the Indian summer monsoon, and detailed studies on the loess-paleosol sequences in this region can provide valuable terrestrial evidence of past changes in the Indian summer monsoon. Secondly, the river terraces in the eastern margin of the TP are considered to be a sensitive recorder of neotectonism to reflect the timing and amplitude of the TP uplift.

Updated Genetic Testing of Primary Hyperoxaluria Type 1 in a Chinese Population:Results from a Single Center Study and a Systematic Review

Primary hyperoxaluria type 1(PH1)is a rare but devastating autosomal recessive inherited disease caused by mutations in gene AGXT.Pathogenic mutations of AGXT were mostly reported in Caucasian but infrequently in Asian,especially in Chinese.To update the genotypes of PH1 in the Chinese population,we collected and identified 7 Chinese probands with PH1 from 2013 to 2017 in our center,five of whom had delayed diagnosis and failed in kidney transplantation.Samples of peripheral blood DNA from the 7 patients and their family members were collected and sequencing analysis was performed to test the mutations of gene AGXT.Western blotting and enzyme activity analysis were conducted to evaluate the function of the mutations.Furthermore,a systematic review from 1998 to 2017 was performed to observe the genetic characteristics between Chinese and Caucasian. The results showed that a total of 12 mutations were identified in the 7 pedigrees.To the best of ourknowledge,2 novel variants of A GXT,p.Gly41 Trp and p.Leu33Met,were first reported.Bioinformatics and functional analysis showed that only 7 mutations led to a reduced expression of alanine-glyoxylate amino transferase (AGT)at a protein level.The systematic review revealed significant population heterogeneity in PH1.In conclusion,new genetic subtypes and genetic characteristics of PH1 are updated in the Chinese population. Furthermore,a genotype-phenotype correlation is found in PH1.

The EST Analysis of A Suppressive Subtraction cDNA Library of Chinese Wild Vitis pseudoreticulata Inoculated with Uncinula necator

Uncinula necator is a worldwide serious fungus disease causing annual heavy lost on grapevine production. In order to get more informations on defense related EST sequences and help breeding program, we constructed and characterized a suppression subtractive hybridization cDNA library with artificially inoculated leaves and control Chinese wild Vitis pseudoreticulata clone Baihe-35-1, which is highly resistant to powdery mildew. In the library, the length of 58 EST fragments known as putative functions varied from 130 to 800 bp, and 60% of the ESTs exhibited high similarity to known sequences in database of GenBank with BLASTX analysis. These genes were involved in stress/defense response, detoxification, signal transduction, disease defense, and etc., and 14 ESTs remained unknown or hypothetical proteins, which may be new genes. The experiment provided an important basis for studying the disease-resistance mechanism and obtaining the genes for the aim of improving grapevine powdery mildew resistance.

Statistical features of aftershock distribution size for moderate and large earthquakes in Chinese mainland

Based on data of earthquake sequences with Ms≥5.0 in Chinese mainland from 1970 to 2004, for different sequence types and different rupture modes of the main shock, the relationship between aftershock distribution size R and the magnitude of the main shock Mo has been studied statistically. Considering the rupture mode of the main shock, we give the quantitative statistical relationships between R and Mo under 95% confidence level for different sequence typos. Qualitatively, lgR, the logarithm of the aftershock distribution size, is positively correlative to the M0, but the data distribution is dispersed. Viewing from different sequence typos, the correlation between R and M0 is very weak for isolated earthquake type （lET） sequence, R distributes in the range from 5 to 60 km; For mainshock-aftershock type （MAT）, lgR is positively correlative to M0; For multiple main shock type （MMT）, the corelation between lgR and M0 is not very obvious when M0≤6.2 and R distributes in the range from 5 to 70 km, while it shows a linear correlation when M0≥6.3. The statistical results also show that the occupational ratios of different sequence types for strike-slip and oblique slip are almost the same. But for dip-slip （mostly are thrust mechanisms）, the ratio of MAT is higher than that of IET and MMT. Comparing with previous results, it indicates that, when M0 is large enough, R is mainly determined by M0 and there is almost no relationship with the rupture mode of the main shock.

Conversion of pure Chinese fir plantation to multi-layered mixed plantation enhances the soil aggregate stability by regulating microbial communities in subtropical China

Background:Soil aggregates are the basic units of soil structure,and their stability is a key indicator of soil quality and capacity to support ecosystem functions.The impacts of various environmental factors on soil aggregates have been widely studied.However,there remains elusive knowledge on the synergistic effects of changing forest stand structure on soil aggregate stability(SAS),particularly in subtropical China where soil erosion remains a critical issue.Methods:We investigated variations in the components of soil humus(HS),including humic acids(HAs),fulvic acids(FAs),and humins(HMs),under pure Chinese fir(Cunninghamia lanceolata)plantation(PP)and multilayered mixed plantation(MP)comprising C.lanceolata,Castanopsis hystrix,and Michelia hedyosperma.The state of soil aggregate stability,was determined by three separate methods,i.e.,dry-sieving,wet-sieving,and the Le Bissonnais.High-throughput sequencing was used to determine the diversity and composition of microbial communities under PP and MP.We then built partial least squares path models(PLS-PM)for assessing the responses of SAS to the variations in soil microorganisms and HS components.Results:The MP stands had significantly greater SAS(P<0.05),higher content of HAs and more rapid organic matter humification within aggregates,than the PP stands.High-throughput sequencing confirmed that the Pielou andα-diversity index values(Chao1 and Shannon)for fungi were all significantly higher under MP than under PP,while no marked difference was found in bacterialα-diversity between the two plantation types.Moreover,there were markedly greater abundance of three bacterial phyla(Verrucomicrobia,Chloroflexi,and Gemmatimonadetes)and three fungal phyla(Ascomycota,Kickxellomycota,and Glomeromycota),and significantly less abundance of two bacterial phyla(Planctomycetes and Firmicutes)and four fungal phyla(Basidiomycota,Mortierellomycota,Mucoromycota,and Rozellomycota)under MP than under PP.The Chloroflexi and Ascomycota phyla appeared to be the primary drivers of soil aggregate distribution.Our findings revealed that the promotion of SAS under MP was mainly driven by increased soil organic matter(SOM)content,which altered bacterial communities and enhanced fungal diversity,thereby increasing HAs content and the rate of organic matter humification.Conclusions:Considering the combined effects of enhanced soil quality,productivity,and relevant economic costs,introducing broadleaved tree species into Chinese fir plantations can be an effective strategy for stabilizing soil structure against erosion in subtropical China.Our study elucidated the controls on variations of SAS in Chinese fir-dominated plantations and demonstrated the benefit of converting pure Chinese fir plantation to multi-layered mixed plantations in increasing soil structural stability and improving site quality.

Effect of a compound starter cultures inoculation on bacterial profile and biogenic amine accumulation in Chinese Sichuan sausages

Effects of a starter culture composed of Lactobacillus sakei,Pediococcus pentosaceus,Staphylococcus xylosus and S.carnosus at the ratios(m/m)of 1:1:1:1 on bacterial profile and biogenic amine accumulation in Chinese Sichuan sausages were demonstrated.In starter culture-inoculated sausages,Lactobacillus spp.,Pediococcus spp.and Staphylococcus spp.were predominant bacterial genus and their relative abundances ranged from 70.14%to 25.98%,57.66%to 14.08%,and 15.71%to 13.40%during fermentation,respectively.Accordingly,Lactobacillus spp.and Weissella spp.were predominant bacterial genus and their relative abundances ranged from 63.14%to 24.70%and 49.40%to 11.96%during spontaneous fermentation,respectively.Furthermore,the abundances of undesirable microorganisms such as Yersinia spp.,Enterobacter spp.,Acietobacter spp.and Psychrobacter spp.were lower than that of the control.The levels of histamine,putrescine,tyramine and cadaverine in Chinese Sichuan sausages with starter cultures inoculation were significantly lower(P<0.05)than that of the control,and were decreased by 83.09%,69.38%,51.87%and 57.20%,respectively,at the end of the ripening.These results revealed that the starter cultures inoculation was a better alternative for microbial quality improvement and biogenic amine reduction of Chinese Sichuan sausages with good sensory attributes.

Structural and functional characteristics of microbiota in oropharynx of sub-healthy children with gastrointestinal heat retention syndrome differentiated by traditional Chinese medicine

Objective:To explore the structural and functional characteristics of microbiota in oropharynx of subhealthy children with gastrointestinal heat retention syndrome(GHRS)differentiated by traditional Chinese medicine,and screen the biometric operational taxonomic units(OTUs)to assist the clinical diagnosis.Methods:We recruited children according to the“GHRS diagnostic scale”,collected their oropharyngeal swabs,and sequenced the 16 SrDNA V4 region.We described the bacterial structure with alpha-indexes,beta-distances,and relative abundances;moreover,we screened the differential genera/OTUs with Wilcoxon rank-sum test,Metagenome Seq analysis,and linear discriminant analysis effect size(LEf Se)analysis,in which biometric OTUs were selected to construct the receiver operating characteristic curve to verify the diagnostic value.The bacterial function was predicted with Kyoto Encyclopedia of Genes and Genomes pathways according to 16S rDNA gene by using Phylogenetic Investigation of Communities by Reconstruction of Unobserved States.Results:The study population was composed of 10 children with GHRS and 10 healthy control children.GHRS children were more likely to overeat(gluttony,P=.033).Alpha-indexes,such as Sobs,abundancebased coverage estimator,Bootstrap,and Qstat,were significantly higher in the GHRS group,while betadistances did not exhibit any significant intergroup differences.There were 9 differently distributed nonpredominant genera between the groups in Wilcoxon rank-sum test,as well as 13 non-predominant genera in Metagenome Seq analysis and 3 non-predominant OTUs in LEfSe analysis.OTU44 and OTU196 were used to construct the receiver operating characteristic curve,and the area under curve was 0.92.Predicted functions showed that pathways related to oxidative phosphorylation and carbon metabolism were enriched in healthy control samples,while the pathway related to renin secretion was remarkably enriched in GHRS samples.Conclusion:Unique oropharyngeal microbial structure and function were identified in GHRS children.OTU44 and OTU196 were specific OTUs,which could be used as biomarkers of GHRS to assist clinical diagnosis.

A Novel Frequent BRCA1 Allele in Chinese Patients with Breast Cancer

The whole length of exon 11 of BRCA1 was sequenced （total 3427 bp） in 59 patients and 10 healthy female blood donors. To allow a rapid determination of the different BRCA1 alleles, a sequence-specific primer PCR method （PCR-SSP） was established and was applied to 57 additional female donors. Finally, the full-length coding region of BRCA1 was analyzed through reversed-transcriptase PCR （RT-PCR） and cDNA sequencing （total 5554 bp） in one donor with wild-type allele and 2 patients with one or two mutated alleles. By genomic DNA sequencing, 5 homozygous polymorphisms were observed in 18 patients： 2201C〉T, 2430T〉C, 2731C〉T, 3232A〉G and 3667A〉G All of them were previously observed in Caucasians, Malay and Chinese, but for the first time the mutations were found in one allele （GenBank AY304547）. Twenty-six patients and 4 donors were heterozygous at these 5 nucleotide positions. The remaining 15 patients and 6 donors showed a sequence identical with the standard BRCA1 gene. Combined the PCR-SSP results and in a summary, 6 of 67 （9.0 %） healthy individuals were homozygous for the mutated allele, whereas 18 of 59 （30.5 %） breast cancer patients were homozygous. A Chi-square test showed a significant correlation between homozygous mutated BRCA1 allele and breast cancer. The cDNA sequencing showed that 2 additional mutations, 4427T〉C in exon 13 and 4956A〉G in exon 16, were found. A new BRCA1 allele, which is BRCA1-2201T/2430C/2731T/3232G/3667G/4427C/4956G （GenBank AY751490）, was found in Chinese. And the homozygote of this mutated allele may implicate a disease-association in Chinese.

A comparative genomics analysis of lung adenocarcinoma for Chinese population by using panel of recurrent mutations

Previous studies have demonstrated that Chinese lung adenocarcinoma(LUAD)patients have unique genetic characteristics,however,the specific genomic features relating to the development and treatment of LUAD in the Chinese population are not fully understood.Here,we applied the ultra-deep targeted sequencing to 66 Chinese LUAD samples,accompanied by comparative analysis with 162 Caucasian LUAD in The Cancer Genome Atlas.We focused on the 68 recurrently mutated genes and results revealed that the panel-based tumor mutational burden(pTMB)is significantly higher in the Chinese LUAD(P=0.0017).Additionally,the percentage of smoking-associated C>A transversion is significantly lower in Chinese LUAD(15.5%vs.39.7%,P=5.69×10^(-27)),while C>T transition is more frequent in Chinese LUAD(35.8%vs.25.7%,P=2.67×10^(-5)),which indicated the ethnic difference in mutation types.Notably,novel driver genes(GNAS and JAK1)that are peculiar to Chinese LUAD were identified,and a more convergent distribution of mutations was observed in the Chinese cohort(P=0.012)compared with scattered mutations in Caucasian LUAD.Our results present a distinct genomic profile of Chinese LUAD compared to Caucasians LUAD and elucidate the ethnic difference in mutation distribution besides the type and rate.

Dynamic changes of genomic methylation profiles at different growth stages in Chinese Tan sheep

Background:Tan sheep,an important local sheep breed in China,is famous for their fur quality.One-month-old Tan sheep have white,curly hair with beautiful flower spikes,commonly known as“nine bends”,which has high economic value.However,the“nine bends”characteristic gradually disappears with age;consequently,the economic value of the Tan sheep decreases.Age-related changes in DNA methylation have been reported and may be responsible for age-induced changes in gene expression.Until now,no genome-wide surveys have been conducted to identify potential DNA methylation sites involved in different sheep growth stages.In this study we investigated the dynamic changes of genome-wide DNA methylation profiles in Tan sheep using DNA from skin and deep whole-genome bisulfite sequencing,and compared the DNA methylation levels at three different growth stages:1,24,and 48 months old(mon1,mon24,and mon48,respectively).Results:In this study,11 skin samples from three growth stages(four for mon1,four for mon24,and three for mon48)were used for DNA methylation analysis and gene expression profiling.There were 52,288 and 236 differentially methylated genes(DMGs)identified between mon1 and mon24,mon1 and mon48,and mon24 and mon48,respectively.Of the differentially methylated regions,1.11%,7.61%,and 7.65% were in the promoter in mon1 vs.mon24,mon24 vs.mon48,and mon1 vs.mon48,respectively.DMGs were enriched in the MAPK and WNT signaling pathways,which are related to age growth and hair follicle morphogenesis processes.There were 51 DMGs associated with age growth and curly fleece formation.Four DMGs between mon1 and mon48(KRT71,CD44,ROR2 and ZDHHC13)were further validated by bisulfite sequencing.Conclusions:This study revealed dynamic changes in the genomic methylation profiles of mon1,mon24,and mon48 sheep,and the percentages of methylated cytosines were 3.38%,2.85% and 4.17%,respectively.Of the DMGs,KRT71 and CD44 were highly methylated in mon1,and ROR2 and ZDHHC13 were highly methylated in mon48.These findings provide foundational information that may be used to develop strategies for potentially retaining the lamb fur and thus improving the economic value of Tan sheep.

ISSR Markers as a Tool for Assessing Genetic Diversity in the Chinese Alligator (Alligator sinensis)

Eight different inter simple sequence repeat(ISSR) markers were used as tools to investigate genetic variability and population differentiation in the Chinese alligator,Alligator sinensis,in this study. Eleven polymorphic bands(17.2%) out of a total of 64 were generated from 110 individuals in three populations. Analysis of molecular variation showed that most of the genetic variation(98.0%) occurred within the populations. Dendrogram relationship based on Nei’s unbiased genetic diversity illustrated that two breeding populations were genetically closely related. The Nm value of the study was 4.520,suggesting that high levels of gene flow existed and no differentiation appeared in the populations. In a reconstructed Neighbor-Joining tree,the haplotypes coming from the same populations did not gather as a class,suggesting the three populations had no apparent geographic pattern. This study shows that ISSR markers could be well applied as a feasible tool to assess genetic diversity in Chinese alligator individuals.

大白菜蜡质缺失突变体YW71的遗传及序列变异分析

以大白菜蜡质突变体YW71为对象,研究其亮绿无蜡粉性状的遗传规律和调控基因。通过遗传分析,表明YW71中的亮绿无蜡粉性状由隐性单基因控制。通过等位基因互补实验证明YW71的亮绿性状是BrWAX2等位突变引起的。序列分析表明,在YW71中BrWAX2基因在第3个外显子末端发生了39 bp的缺失,进而引起转录水平的可变剪切和翻译水平的提前终止。表达模式分析表明,BrWAX2基因在YW71茎和叶中表达量显著下降。此外,研究针对39 bp的变异开发并验证了共显性标记BrWAX2-In Del1。研究结果丰富了白菜类蔬菜蜡质突变遗传资源,将为亮绿无蜡粉品种的分子育种提供理论指导和技术支持。

黄土高原古气候变化定量重建的新进展

中国黄土-红黏土沉积是可与深海沉积媲美的陆相沉积载体,记录了晚新生代东亚大陆气候环境变化历史。基于中国黄土的多种理化指标,重建了黄土高原地区构造-千年尺度东亚季风变化历史,为探讨区域与全球气候的联系提供了关键证据。近年来,黄土高原古气候变化研究逐步从定性描述拓展到定量重建,本文旨在回顾基于中国黄土定量重建古温度和古降雨变化取得的重要进展。首先,梳理了古气候要素定量重建的指标和方法,古温度重建指标包括植硅体、碳酸盐耦合同位素、微生物脂类代用指标等;古降水变化敏感指标包括磁化率、白云石/方解石含量、生物微钙体Sr/Ca比值、有机碳同位素以及^(10)Be等。然后,汇总了典型黄土剖面定量重建的古气候变化序列,分别从构造、轨道及千年时间尺度上探讨了古温度和古降雨的变化特征。结果表明,基于生标重建的不同时间跨度的土壤古温度变化序列,在冰期—间冰期尺度上的波动特征基本一致,但在冰盛期—冰消期时段出现了增温超前现象,说明陆地植被对土壤温度变化有重要调制作用。然而,不同指标重建的降水变化幅度差异较大,主导周期也存在差异,说明定量重建降水变化仍有较大挑战。最后,简要总结了黄土高原古气候定量重建存在的问题,明确了区分温度和降水季节性变化的重要性,指出加强地质记录与模拟结果的对比同化,将有助深化对多尺度季风变化动力学的理解。

基于高通量测序分析中草药对发酵泡菜亚硝酸盐含量的影响及机制

为了探究金银花、黄柏两种中草药对发酵泡菜亚硝盐含量的影响及机制,基于高通量测序技术分析泡菜微生物群落结构,采用分光光度法分析泡菜中亚硝盐含量。研究结果表明,分别添加5%金银花和5%黄柏的泡菜中亚硝酸盐含量(8.02,5.90 mg/kg)均显著低于对照组(12.87 mg/kg)(P<0.05)。对泡菜样品进行高通量测序,共得到202个可操作分类单元(OTU),分属于11个门、129个属、165个种。添加5%的金银花和5%黄柏发酵10 d的泡菜样品中微生物的Chao 1指数显著低于对照组(P<0.05)。Proteobacteria(变形菌门)是各个样品中的优势菌门,相对含量高达90%。不同中草药处理的微生物在属水平上的优势微生物相对含量相差很大,对照组、添加金银花的发酵泡菜组、添加黄柏的发酵泡菜组中Pseudomonas(假单胞菌属)的相对含量分别为52%、1%、1%;Serratia(沙雷氏菌属)的相对含量分别为15%、0%、1%;Achromobacter(无色杆菌属)的相对含量分别为7%、1%、0%。实验结果表明金银花和黄柏对发酵白菜中亚硝酸盐形成的抑制作用是由于其抑制了肠杆菌科(Serratia、Achromobacter)和Pseudomonas(假单胞菌属)微生物的生长繁殖。