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杭白菊CmbHLH96的克隆及生物信息分析
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作者 何子涵 张佳凝 +3 位作者 全英杰 任镘蓉 杨雯婷 高日 《延边大学农学学报》 2021年第4期35-40,共6页
bHLH是一种转录因子,在植物生长发育过程中起着重要作用。该试验以杭白菊试管苗叶片为材料,提取RNA反转录成cDNA,设计特异引物克隆CmbHLH 96基因,其全长1203 bp,最大开放阅读框(ORF)918 bp,编码306个氨基酸序列,分子量1121.74 KD,理论... bHLH是一种转录因子,在植物生长发育过程中起着重要作用。该试验以杭白菊试管苗叶片为材料,提取RNA反转录成cDNA,设计特异引物克隆CmbHLH 96基因,其全长1203 bp,最大开放阅读框(ORF)918 bp,编码306个氨基酸序列,分子量1121.74 KD,理论等电点5.06,不稳定系数35.95,平均亲水性0.75,脂肪系数33.65。分析CmbHLH96蛋白结构域发现,其包含1个Helix-Loop-Helix结构域;对CmbHLH96蛋白二级、三级结构预测的结果它们主要由α螺旋、无规则卷曲和延伸链构成,分别占25.82%、14.71%和59.48%。亚细胞定位预测CmbHLH96可能定位在细胞核中。通过在NCBI上进行BLAST对比并构建系统进化树,结果发现CmbHLH96与青蒿同源蛋白亲缘关系比较近。miRNA预测显示CmbHLH 96基因受miR7696调控。 展开更多
关键词 杭白菊 cmbhlh 96 基因克隆 MIRNA
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CmbHLH110,a novel bHLH transcription factor,accelerates flowering in chrysanthemum
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作者 Yaoyao Huang Xiaojuan Xing +7 位作者 Jinyu Jin Yun Tang Lian Ding Aiping Song Sumei Chen Fadi Chen Jiafu Jiang Weimin Fang 《Horticultural Plant Journal》 SCIE CAS 2024年第6期1437-1448,共12页
Basic helix-loop-helix(bHLH)transcription factor gene family in plants controls various growth and development aspects;however,the actual roles of these genes in flowering plants are not well known.In this study,a nov... Basic helix-loop-helix(bHLH)transcription factor gene family in plants controls various growth and development aspects;however,the actual roles of these genes in flowering plants are not well known.In this study,a novel bHLH protein CmbHLH110 was found to interact with CmERF110 by in vitro and in vivo experiments,a chrysanthemum ERF110 homolog that acts as a positive flowering regulator.In addition,CmbHLH110 was also found to regulate the flowering of chrysanthemums,overexpression of CmbHLH110 causes chrysanthemums to flower earlier,and suppressed CmbHLH110 leads to delayed flowering.Furthermore,the loss-of-function Arabidopsis mutant of its homologue PERICYCLE FACTOR TYPE-A 5(PFA5)had a noticeable late flowering phenotype,and CmbHLH110 completely complemented the late flowering phenotype of the pfa5 mutant,whereas heterologous overexpression of CmbHLH110 in Arabidopsis Col-0 caused early flowering.Transcriptome sequencing revealed significant differential expression of flowering-related and circadian clock-related genes in transgenic chrysanthemum.Therefore,we concluded that CmbHLH110,as a novel flowering regulator,could interact with CmERF110 to regulate flowering in chrysanthemum. 展开更多
关键词 Chrysanthemum cmbhlh110 PFA5 Flowering Circadian clock
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