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基于OSMAC与非靶向代谢组学的小链霉菌HCCB10043活性化合物挖掘
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作者 张秋萍 饶敏 魏维 《国外医药(抗生素分册)》 CAS 2023年第2期102-107,共6页
目的 基于OSMAC理念与非靶向代谢组学发现、鉴定小链霉菌产生的活性化合物。方法 通过改变培养基配方,结合抗菌活性检测与UPLC-HRMS技术,借助MS-MS数据解析、化合物库检索等手段分析并初步鉴定小链霉菌HCCB10043发酵产生的诺卡胺类化合... 目的 基于OSMAC理念与非靶向代谢组学发现、鉴定小链霉菌产生的活性化合物。方法 通过改变培养基配方,结合抗菌活性检测与UPLC-HRMS技术,借助MS-MS数据解析、化合物库检索等手段分析并初步鉴定小链霉菌HCCB10043发酵产生的诺卡胺类化合物与Collismycin类化合物,并通过基因序列比对找到其生物合成基因簇。结果 在小链霉菌HCCB10043的M1培养基发酵提取物中发现了四个诺卡胺类物质(A-D),其中化合物A为新化合物;在M7培养基发酵提取物中发现了三个Collismycin类物质(E-G)。结论 诺卡胺类与Collismycin类化合物均是首次在小链霉菌中发现的具有抗菌活性的次级代谢产物。该结果进一步扩展了小链霉菌的代谢产物组,为提高其主要活性产物-重要抗生素达托霉素前体-A21978C化合物的产量提供理论基础;另一方面挖掘多样化的微生物天然活性产物,为新药研究提供化合物基础。 展开更多
关键词 小链霉菌 UPLC-MS 代谢组学 OSMAC 诺卡胺 collismycin
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Characterization of the metallo-dependent amidohydrolases responsible for“auxiliary”leucinyl removal in the biosynthesis of 2,20-bipyridine antibiotics
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作者 Ming Chen Bo Pang +2 位作者 Ya-nan Du Yi-peng Zhang Wen Liu 《Synthetic and Systems Biotechnology》 SCIE 2017年第2期137-146,共10页
2,20-Bipyridine(2,20-BiPy)is an attractive core structure present in a number of biologically active natural products,including the structurally related antibiotics caerulomycins(CAEs)and collismycins(COLs).Their bios... 2,20-Bipyridine(2,20-BiPy)is an attractive core structure present in a number of biologically active natural products,including the structurally related antibiotics caerulomycins(CAEs)and collismycins(COLs).Their biosynthetic pathways share a similar key 2,20-BiPy-L-leucine intermediate,which is desulfurated or sulfurated at C5,arises from a polyketide synthase/nonribosomal peptide synthetase hybrid assembly line.Focusing on the common off-line modification steps,we here report that the removal of the“auxiliary”L-leucine residue relies on the metallo-dependent amidohydrolase activity of CaeD or ColD.This activity leads to the production of similar 2,20-BiPy carboxylate products that then receive an oxime functionality that is characteristic for both CAEs and COLs.Unlike many metallo-dependent amidohydrolase superfamily proteins that have been previously reported,these proteins(particularly CaeD)exhibited a strong zinc ion-binding capacity that was proven by site-specific mutagenesis studies to be essential to proteolytic activity.The kinetics of the conversions that respectively involve CaeD and ColD were analyzed,showing the differences in the efficiency and substrate specificity of these two proteins.These findings would generate interest in the metallo-dependent amidohydrolase superfamily proteins that are involved in the biosynthesis of bioactive natural products. 展开更多
关键词 2 20-Bipyridine antibiotics Caerulomycins collismycins AMIDOHYDROLASE
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