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不同核酸提取方法对HBV-DNA检测性能验证情况分析
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作者 周文娟 林真 徐建萍 《现代医药卫生》 2024年第4期575-580,共6页
目的评估2种乙型肝炎病毒(HBV)-DNA提取方法及2家检测试剂的性能,有助于选择优化提取试剂和检测试剂。方法2023年4月采用达安全自动核酸提取仪提取法(磁珠法)和手工提取法(一步法),并用达安和圣湘2种HBV-DNA试剂检测,对其进行精密度、... 目的评估2种乙型肝炎病毒(HBV)-DNA提取方法及2家检测试剂的性能,有助于选择优化提取试剂和检测试剂。方法2023年4月采用达安全自动核酸提取仪提取法(磁珠法)和手工提取法(一步法),并用达安和圣湘2种HBV-DNA试剂检测,对其进行精密度、正确度、线性范围、检出限及抗干扰能力等性能进行验证和评价。结果达安全自动核酸提取仪提取达安试剂检测、手工提取达安试剂检测和手工提取圣湘试剂检测在精密度、正确度、线性范围、检出限方面验证结果均达标;达安全自动核酸提取仪提取圣湘试剂检测在低值检测中变异系数大于5%,最低检测限验证不合格;抗干扰能力方面,全自动核酸提取仪提取的2.0 g/dL血红蛋白浓度的样本用达安和圣湘试剂检测结果均不受影响。手工提取甘油三酯浓度达3000 mg/dL的样本用达安和圣湘试剂检测的结果均不受影响。结论不同厂家的提取和检测试剂避免混用,达安和圣湘试剂对HBV-DNA定量检测的结果均符合要求。 展开更多
关键词 乙型肝炎病毒-dna定量检测 全自动核酸提取仪法 手工提取法 性能验证
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基于DNA步行器的传感器技术在食品安全检测中的研究进展
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作者 宋思青 司晓夏 +3 位作者 胡聚峰 杜子沫 陈历俊 刘继超 《食品工业科技》 CAS 北大核心 2024年第12期395-404,共10页
随着DNA纳米技术的快速发展,各种结构和功能的DNA分子被用于构建具有动态行为的可编程纳米机器。其中,DNA步行器因其能够借助驱动力在预定轨道上自主、逐步移动以产生级联信号放大的优势,成为了生物传感、生物成像以及药物递送等领域日... 随着DNA纳米技术的快速发展,各种结构和功能的DNA分子被用于构建具有动态行为的可编程纳米机器。其中,DNA步行器因其能够借助驱动力在预定轨道上自主、逐步移动以产生级联信号放大的优势,成为了生物传感、生物成像以及药物递送等领域日益增长的研究热点,在食品污染物快速超灵敏检测方面展现出巨大的应用潜力。本综述首先简要介绍了DNA步行器的基本原理,并着重阐述了提升DNA步行器行走效率的策略,然后总结了其在食品安全检测中的应用,最后对DNA步行器未来研究方向进行了展望,为推动其实际应用提供了理论指导。 展开更多
关键词 食品安全 dna 步行器 信号放大 核酸适配体 生物传感器
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吲哚羧酸类Dy(Ⅲ)配合物与DNA作用机制研究
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作者 罗思雨 朱小双 +2 位作者 何秋蓉 王思茗 李冰 《石油化工应用》 CAS 2024年第1期105-107,121,共4页
以7-氮杂吲哚-3-羧酸(7AI_(3)CAH_(2))为配体构筑了一例新型稀土Dy(Ⅲ)配合物[Dy(7AI_(3)CAH)_(2)(NO_(3))(H_(2)O)_(2)],利用元素分析、红外光谱、热重分析等对其进行结构表征。黏度法和荧光光谱表明该配合物与小牛胸腺DNA(CT-DNA)间... 以7-氮杂吲哚-3-羧酸(7AI_(3)CAH_(2))为配体构筑了一例新型稀土Dy(Ⅲ)配合物[Dy(7AI_(3)CAH)_(2)(NO_(3))(H_(2)O)_(2)],利用元素分析、红外光谱、热重分析等对其进行结构表征。黏度法和荧光光谱表明该配合物与小牛胸腺DNA(CT-DNA)间结合模式为嵌插结合,配合物与CT-DNA表现出良好结合作用。 展开更多
关键词 配合物 7-氮杂吲哚-3-羧酸 小牛胸腺dna
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SELEX技术中制备单链DNA的方法
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作者 徐婷钰 林陈水 《生物化工》 CAS 2024年第2期238-242,共5页
制备单链DNA(ssDNA)是许多常用实验中的重要内容,是通过指数富集的配体系统(SELEX)进行体外筛选核酸适配体的关键步骤之一。目前已报道多种方式可通过双链DNA(dsDNA)制备ssDNA,包括链霉亲和素包被磁珠分离、不对称PCR、不等大小引物PCR... 制备单链DNA(ssDNA)是许多常用实验中的重要内容,是通过指数富集的配体系统(SELEX)进行体外筛选核酸适配体的关键步骤之一。目前已报道多种方式可通过双链DNA(dsDNA)制备ssDNA,包括链霉亲和素包被磁珠分离、不对称PCR、不等大小引物PCR、酶消化、不对称PCR结合酶消化和不对称乳液PCR等,而如何快速高效地制备ssDNA是研究重点。本文综述了常用的几种通过聚合酶链式反应(PCR)制备ssDNA的方法,对其进行综合分析。根据产物的纯度、操作难易、实验成本等方面综合考虑,选择产物高纯度、操作简便且实验成本较低的ssDNA制备方法,为具有不同需求的应用场景提供参考依据。 展开更多
关键词 核酸适配体 单链dna制备 聚合酶链式反应
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DNA条形码技术融入普通昆虫学实验教学
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作者 康泽辉 孙丽娟 +1 位作者 郑桂玲 张晓 《实验室研究与探索》 CAS 北大核心 2024年第3期184-187,212,共5页
为了提升普通昆虫学实验教学质量,以DNA条形码技术为例,尝试将最新科研成果和技术与普通昆虫学实验教学进行融合。介绍了植物保护专业学生掌握DNA条形码技术的必要性,分析了在普通昆虫学实验教学中开展DNA条形码实验的可行性,在样品保存... 为了提升普通昆虫学实验教学质量,以DNA条形码技术为例,尝试将最新科研成果和技术与普通昆虫学实验教学进行融合。介绍了植物保护专业学生掌握DNA条形码技术的必要性,分析了在普通昆虫学实验教学中开展DNA条形码实验的可行性,在样品保存、DNA提取、PCR扩增、电泳检测、测序和分析等方面优化了以COI基因序列作为DNA条形码开展分子鉴定的具体流程,设计了开展DNA条形码专题实验或者将其与传统分类实验结合的实施和考核方案。DNA条形码技术的融入改变了普通昆虫学实验传统教学模式,也为探索创新性实验教学提供了思路。 展开更多
关键词 普通昆虫学 实验设计 课程改革 基因条形码
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混合模式层析分离纯化超螺旋质粒DNA
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作者 张鹏程 谭远志 +3 位作者 孙艳娜 张其磊 姚善泾 林东强 《高校化学工程学报》 EI CAS CSCD 北大核心 2023年第5期806-812,共7页
针对细胞裂解液中的超螺旋质粒DNA(sc pDNA)的分离,以质粒pVAX1为典型对象、采用Capto PlasmidSelect作为混合模式层析介质,探讨了料液中主要成分sc pDNA、开环质粒DNA(oc pDNA)和RNA的吸附行为,优化了分离条件,实现了从成分较为复杂的... 针对细胞裂解液中的超螺旋质粒DNA(sc pDNA)的分离,以质粒pVAX1为典型对象、采用Capto PlasmidSelect作为混合模式层析介质,探讨了料液中主要成分sc pDNA、开环质粒DNA(oc pDNA)和RNA的吸附行为,优化了分离条件,实现了从成分较为复杂的料液中高效分离sc pDNA。考察了上述3种组分的静态吸附,发现在(NH_(4))_(2)SO_(4)浓度c(NH_(4))_(2)SO4为1.9~2.5 mol·L^(-1)时,sc pDNA均具有较高的吸附量,确定c(NH_(4))_(2)SO_(4)=2.5 mol·L^(-1)的料液可直接上样,此时sc pDNA饱和吸附量为每克介质吸附3.3 mg。动态吸附实验发现,sc pDNA穿透略晚于oc pDNA,sc pDNA动态载量为每毫升介质负载2.00 mg,RNA吸附能力明显强于pDNA。进一步优化了洗脱、冲洗和上样量等分离条件,采用c(NH_(4))_(2)SO_(4)=2.5 mol·L^(-1)上样、c(NH_(4))_(2)SO_(4)=1.9 mol·L^(-1)冲洗、(c(NH_(4))_(2)SO_(4)=1.7 mol·L^(-1))+(cNaCl=0.3 mol·L^(-1))洗脱,sc pDNA纯度可达83.9%、同质性高达95.8%、收率为80.6%。结果表明,混合模式层析对sc pDNA选择性好、处理量较大,具有良好的应用价值。 展开更多
关键词 超螺旋质粒dna 吸附 混合模式层析 核酸分离
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The effect of retinoic acid on Ito cell proliferation and content of DNA and RNA 被引量:13
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作者 Gao ZL Li DG +1 位作者 Lu HM Gu XH 《World Journal of Gastroenterology》 SCIE CAS CSCD 1999年第5期443-444,共2页
关键词 liver fibrosis RETINOIC acid ITO CELL CELL culture MICROSPECTROPHOTOMETER dna RNA
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Crystal Structures and DNA Binding Properties of 2-Naphthoxyacetic Acid Cu(Ⅱ) Complexes 被引量:7
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作者 刘艳珠 高红岩 +2 位作者 易绣光 李东平 李永绣 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2019年第8期1362-1369,共8页
Two new copper complexes based on 2-naphthoxyacetic acid ligand, namely [Cu(L)2(CH3CN)]2(1) and [Cu(L)(1,10-phen)2](2), where L = 2-naphthoxyacetic acid and 1,10-phen = 1,10-phenanthroline, were obtained by hydrotherm... Two new copper complexes based on 2-naphthoxyacetic acid ligand, namely [Cu(L)2(CH3CN)]2(1) and [Cu(L)(1,10-phen)2](2), where L = 2-naphthoxyacetic acid and 1,10-phen = 1,10-phenanthroline, were obtained by hydrothermal reaction and characterized by single-crystal X-ray diffraction. The binuclear complex 1 and mononuclear complex 2 belong to space group C2/c and P■, respectively. The binding properties of the two compounds with ct-DNA were investigated by UV-Vis and fluorescence spectra. The two compounds could bind with ct-DNA through interactions. Compound 2 displays stronger binding ability in the reaction with ct-DNA. 展开更多
关键词 2-naphthoxyacetic acid 1 10-PHENANTHROLINE dna BINDING spectrum
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Synthesis, Crystal Structure and DNA-Binding Property of a Mn(Ⅱ) Complex Based on 5-(Tri-fluoromethyl)pyridine-2-carboxylic Acid 被引量:4
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作者 王嘉恺 李冰 +2 位作者 武焕平 田晓燕 麻晓霞 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2019年第8期1349-1355,共7页
A new complex Mn(Htpc)2(H2O)2(1, Htpc = 5-(trifluoromethyl)pyridine-2-carboxylic acid) has been synthesized and characterized by elemental analysis, IR, TG and single-crystal X-ray diffraction. 1 belongs to triclinic ... A new complex Mn(Htpc)2(H2O)2(1, Htpc = 5-(trifluoromethyl)pyridine-2-carboxylic acid) has been synthesized and characterized by elemental analysis, IR, TG and single-crystal X-ray diffraction. 1 belongs to triclinic system, space group P■ with a = 5.0885(10), b = 6.5574(13), c = 14.016(3) ?, β = 90.67(3)o, V = 436.34(17) ?3, Z = 1, Dc = 1.793 g·cm-3, μ = 0.855 mm-1, Mr = 471.18, F(000) = 235, the final R = 0.0454 and wR = 0.1134 for 1998 observed reflections with I > 2σ(I). The Mn(Ⅱ) ion is coordinated by two N and two O atoms from two Htpc as well as two O atoms from two coordinated water molecules, forming a 0D motif with distorted octahedral coordinate geometry. The adjacent 0D units are linked into 1D chains through hydrogen bond O(1W)–H(1 WB)···O(2), and via the O(1 W)–H(1 WA)···O(1) hydrogen bond the neighboring 1D chains are connected into a 2D supramolecular layer. Moreover, the interactions between the ligand and its complex with CT-DNA were studied by EtBr fluorescence probe, which suggested that these compounds bind to CT-DNA through an intercalation mode. The binding constants were 0.41 and 0.64 for Htpc and complex 1, respectively. It indicates that the interaction between complex 1 and CT-DNA is stronger than Htpc. 展开更多
关键词 5-(trifluoromethyl)pyridine-2-carboxylic acid crystal structure dna fluorescence SPECTRA
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Protective Roles of α-lipoic Acid in Rat Model of Mitochondrial DNA4834bp Deletion in Inner Ear 被引量:2
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作者 彭炜 胡钰娟 +4 位作者 钟毅 陈蓓 孙宇 杨阳 孔维佳 《Journal of Huazhong University of Science and Technology(Medical Sciences)》 SCIE CAS 2010年第4期514-518,共5页
The protective roles of α-lipoic acid in the rat model of mitochondrial DNA (mtDNA) 4834bp deletion in inner ear were investigated. Forty female Wistar rats at 4 weeks of age were divided into four groups: group A (D... The protective roles of α-lipoic acid in the rat model of mitochondrial DNA (mtDNA) 4834bp deletion in inner ear were investigated. Forty female Wistar rats at 4 weeks of age were divided into four groups: group A (D-galactose group, n=10), group B (D-galactose+α-lipoic acid group, n=10), group C (α-lipoic acid group, n=10), and group D (control group, n=10). Auditory brainstem response (ABR) was used to detect the hearing threshold. Colorimetry was used to analyze activity of superoxide dismutase (SOD) and concentration of malondialdehyde (MDA). The percentage of mtDNA4834bp deletion in inner ear was identified by real-time PCR. There was no significant difference in ABR threshold shift among all groups. The percentage of mtDNA4834bp deletion in group A was higher than that in other groups, but there was no significant difference in percentage of mtDNA4834bp deletion among groups B, C, and D. The activity of SOD in group A was lower than that in other groups. The concentration of MDA in group A was higher than that in other groups. It was concluded that there was no significant hearing loss when the percentage of mtDNA4834bp deletion was lower than 12.5%. α-Lipoic acid could prevent the reactive oxygen species (ROS)-induced mtDNA4834bp deletion in inner ear of rats. 展开更多
关键词 α-lipoic acid D-GALACTOSE mitochondrial dna common deletion PRESBYCUSIS
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MGMT is down-regulated independently of promoter DNA methylation in rats with all-trans retinoic acidinduced spina bifida aperta 被引量:2
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作者 He-Nan Zhang Yi Guo +3 位作者 Wei Ma Jia Xue Wei-Lin Wang Zheng-Wei Yuan 《Neural Regeneration Research》 SCIE CAS CSCD 2019年第2期361-368,共8页
O6-methylguanine DNA methyltransferase(MGMT), a DNA repair enzyme, has been reported in some congenital malformations, but it is less frequently reported in neural tube defects. This study investigated MGMT mRNA expre... O6-methylguanine DNA methyltransferase(MGMT), a DNA repair enzyme, has been reported in some congenital malformations, but it is less frequently reported in neural tube defects. This study investigated MGMT mRNA expression and methylation levels in the early embryo and in different embryonic stages, as well as the relationship between MGMT and neural tube defects. Spina bifida aperta was induced in rats by a single intragastric administration of all-trans retinoic acid on embryonic day(E) 10, whereas normal control rats received the same amount of olive oil on the same embryonic day. DNA damage was assessed by detecting γ-H2 A.X in spina bifida aperta rats. Real time-polymerase chain reaction was used to examine mRNA expression of MGMT in normal control and spina bifida aperta rats. In normal controls, the MGMT mRNA expression decreased with increasing embryonic days, and was remarkably reduced from E11 to E14, reaching a minimum at E18. In the spina bifida aperta model, γ-H2 A.X protein expression was increased, and mRNA expression of MGMT was markedly decreased on E14, E16, and E18. Bisulfite sequencing polymerase chain reaction for MGMT promoter methylation demonstrated that almost all CpG sites in the MGMT promoter remained unmethylated in both spina bifida aperta rats and normal controls, and there was no significant difference in methylation level between the two groups on either E14 or E18. Our results show that DNA damage occurs in spina bifida aperta rats. The mRNA expression of MGMT is downregulated, and this downregulation is independent of promoter DNA methylation. 展开更多
关键词 nerve REGENERATION NEURAL tube defects spina bifida aperta spinal cord ALL-TRANS retinoic acid O6-methylguanine dna methyltransferase gene expression dna methylation PROMOTER BISULFITE sequencing polymerase chain reaction NEURAL REGENERATION
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Polyunsaturated fatty acids and DNA methylation in colorectal cancer 被引量:2
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作者 Mostafa Moradi Sarabi Reza Mohammadrezaei Khorramabadi +1 位作者 Zohre Zare Ebrahim Eftekhar 《World Journal of Clinical Cases》 SCIE 2019年第24期4172-4185,共14页
Colorectal cancer(CRC) has been designated a major global problem, especially due to its high prevalence in developed countries. CRC mostly occurs sporadically(75%-80%), and only 20%-25% of patients have a family hist... Colorectal cancer(CRC) has been designated a major global problem, especially due to its high prevalence in developed countries. CRC mostly occurs sporadically(75%-80%), and only 20%-25% of patients have a family history.Several processes are involved in the development of CRC such as a combination of genetic and epigenetic alterations. Epigenetic changes, including DNA methylation play a vital role in the progression of CRC. Complex interactions between susceptibility genes and environmental factors, such as a diet and sedentary lifestyle, lead to the development of CRC. Clinical and experimental studies have confirmed the beneficial effects of dietary polyunsaturated fatty acids(PUFAs) in preventing CRC. From a mechanistic viewpoint, it has been suggested that PUFAs are pleiotropic agents that alter chromatin remodeling,membrane structure and downstream cell signaling. Moreover, PUFAs can alter the epigenome via modulation of DNA methylation. In this review, we summarize recent investigations linking PUFAs and DNA methylationassociated CRC risk. 展开更多
关键词 Colorectal cancer Polyunsaturated fatty acids dna methylation Epigenetic Docosahexaenoic acid Eicosapentaenoic acid
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No difference in high-magnification morphology and hyaluronic acid binding in the selection of euploid spermatozoa with intact DNA 被引量:2
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作者 Suchada Mongkolchaipak Teraporn Vutyavanich 《Asian Journal of Andrology》 SCIE CAS CSCD 2013年第3期421-424,共4页
In this study, we compared conventional sperm selection with high-magnification morphology based on the motile sperm organellar morphology examination (MSOME) criteria, and hyaluronic acid (HA) binding for sperm c... In this study, we compared conventional sperm selection with high-magnification morphology based on the motile sperm organellar morphology examination (MSOME) criteria, and hyaluronic acid (HA) binding for sperm chromosome aneuploidy and DNA fragmentation rates. Semen from 50 severe male factor cases was processed through density gradient centrifugation, and subjected to sperm selection by using the conventional method (control), high magnification at x6650 or HA binding. Aneuploidy was detected by fluorescence in situ hybridization with probes for chromosomes 13, 18, 21, X and Y, and DNA fragmentation by the terminal deoxynucleotidyl transferase dUTP nick end labelling (TUNEL) method. Spermatozoa selected under high-magnification had a lower DNA fragmentation rate (2.6% vs. 1.7%; P=0.032), with no significant difference in aneuploidy rate (0.8% vs0.7%; P=0.583), than those selected by the HA binding method. Spermatozoa selected by both methods had much lower aneuploidy and DNA fragmentation rate than the controls (7% aneuploidy and 26.8% DNA fragmentation rates, respectively). In the high-magnification group, the aneuploidy rate was lower when the best spermatozoa were selected than when only the second-best spermatozoa were available for selection, but the DNA fragmentation rate was not different. In conclusion, sperm selection under high magnification was more effective than under HA binding in selecting spermatozoa with low DNA fragmentation rate, but the small difference (0.9%) might not be clinically meaningful. Both methods were better than the conventional method of sperm selection. 展开更多
关键词 aneuploidy dna fragmentation hyaluronic acid binding intracytoplasmic sperm injection (ICSI) intracytoplasmic mor-phologically selected sperm injection (IMSI) motile sperm organellar morphology examination physiologic intracytoplasmic sperminjection
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Naringin ameliorates acetic acid induced colitis through modulation of endogenous oxido-nitrosative balance and DNA damage in rats 被引量:8
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作者 Venkatashivam Shiva Kumar Anuchandra Ramchandra Rajmane +3 位作者 Mohammad Adil Amit Dattatraya Kandhare Pinaki Ghosh Subhash Laxman Bodhankar 《The Journal of Biomedical Research》 CAS 2014年第2期132-145,共14页
The aim of this study was to evaluate the effect of naringin on experimentally induced inflammatory bowel dis- ease in rats. Naringin (20, 40 and 80 mg/kg) was given orally for 7 days to Wistar rats before induction... The aim of this study was to evaluate the effect of naringin on experimentally induced inflammatory bowel dis- ease in rats. Naringin (20, 40 and 80 mg/kg) was given orally for 7 days to Wistar rats before induction of colitis by intrarectal instillation of 2 mL of 4% (v/v) acetic acid solution. The degree of colonic mucosal damage was analyzed by examining mucosal damage, ulcer area, ulcer index and stool consistency. Intrarectal administration of 4% acetic acid resulted in significant modulation of serum alkaline phosphatase, lactate dehydrogenase, superoxide dismutase (SOD), glutathione (GSH), malondialdehyde (MDA) and myeloperoxidase (MPO) content along with colonic nitric oxide (NO), xanthine oxidase (XO) level and protein carbonyl content in the colonic tissue as well as in blood. Naringin (40 and 80 mg/kg) exerted a dose dependent (P 〈 0.05) ameliorative effect, as it significantly increased hematological parameter as well as colonic SOD and GSH. There was a significant (P 〈 0.05) and dose dependant inhibition of macroscopical score, ulcer area along with colonic MDA, MPO activity by the 7 days of pretreatment of naringin (40 and 80 mg/kg). Biochemical studies revealed a significant (P 〈 0.05) dose dependant inhibition in serum alkaline phosphatase (ALP) and lactate dehydrogenase (LDH) levels by pretreatment of naringin. Increased levels of colonic NO, XO, protein carbonyl content and DNA damage were also sig- nificantly decreased by naringin pretreatment. The findings of the present investigation propose that naringin has an anti-inflammatory, anti-oxidant and anti-apoptotic potential effect at colorectal sites as it modulates the production and expression of oxidative mediators such as MDA, MPO, NO and XO, thus reducing DNA damage. 展开更多
关键词 acetic acid apoptosis fluorimetric analysis of dna unwinding inflammatory bowel disease my-eloperoxidase naringin nitrite/nitrate oxidative stress porotein carbonyl content vascular permeability xanthineoxidase
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EFFECT OF GLYCYRRHETINIC ACID ON DNA DAMAGE AND UNSCHEDULED DNA SYNTHESIS INDUCED BY BENZO(α)PYRENE 被引量:1
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作者 陈晓光 韩锐 《Chinese Medical Sciences Journal》 CAS CSCD 1995年第1期16-19,共4页
EFFECTOFGLYCYRRHETINICACIDONDNADAMAGEANDUNSCHEDULEDDNASYNTHESISINDUCEDBYBENZO(α)PYRENEChenXiaoguang(陈晓光)andH... EFFECTOFGLYCYRRHETINICACIDONDNADAMAGEANDUNSCHEDULEDDNASYNTHESISINDUCEDBYBENZO(α)PYRENEChenXiaoguang(陈晓光)andHanRui(韩锐)(Departm... 展开更多
关键词 甘草亭酸 dna损伤 dna合成 动物实验 肿瘤
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UV Assisted Preliminary DNA Binding Studies and Single-crystal X-ray Structure of 4-{(4-Nitrophenyl-sulfonamido)methyl}cyclohexanecarboxylic Acid 被引量:3
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作者 MUHAMMAD Danish RABIA Ayub Butt +2 位作者 MUHAMMAD Nawaz Tahir MUHAMMAD Ashfaq SYEDA Tahira Hafeez 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2017年第5期745-750,共6页
A new sulfonamide, 4-{(4-nitrophenylsulfonamido)methyl}cyclohexanecarboxylic acid(C14H18N2O6S), has been synthesized by the reaction of tranexamic acid and 4-nitrobenzenesulfonyl chloride in basic medium at room t... A new sulfonamide, 4-{(4-nitrophenylsulfonamido)methyl}cyclohexanecarboxylic acid(C14H18N2O6S), has been synthesized by the reaction of tranexamic acid and 4-nitrobenzenesulfonyl chloride in basic medium at room temperature. The molecular structure was determined by FT-IR, NMR, elemental analysis and single-crystal X-ray technique. X-ray diffraction shows that the compound crystallizes in the monoclinic system, space group P21/c with a = 13.5980(7), b = 4.9877(2), c = 23.3878(13) A, β = 93.254(3)°, Z = 4, V = 1583.67(14) A3, μ = 0.237 mm-1, F(000) = 720, R = 0.0471 and w R = 0.1182. The molecules are related by inversion and paired into dimers via C–H…O interactions. The dimmers are interlinked due to strong N–H…O bonds, where O-atoms are of sulfonyl groups. The molecules are stabilized in the form of infinite two-dimensional network with base vectors [0 1 0] and [0 0 –1] in the plane(1 0 2). The existence of good intermolecular interactions suggests the biological importance of the synthesized molecule. The compound was screened for its interaction with FS-DNA using UV-visible spectroscopy. UV-visible spectroscopic results depict that the compound interacts with DNA by mixed binding mode intercalation along with hydrogen bonding. Negative values of ΔG(–23.34, –17.79 k J·mol-1) indicate spontaneity of the compound-DNA adduct formation. 展开更多
关键词 SULFONAMIDE tranexamic acid 4-nitrobenzenesulfonyl chloride XRD FS-dna intercalation
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三种游离核酸提取试剂盒对血浆cfDNA提取性能的比较 被引量:1
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作者 应超 蔡燕宁 +3 位作者 郝淑文 王婷 刘沅贺 赵立芳 《实用医学杂志》 CAS 北大核心 2023年第12期1556-1563,共8页
目的综合评估3种游离核酸(cfDNA)提取试剂盒,以筛选出经济可靠的商品试剂盒。方法我们使用了3种不同的试剂盒提取10名健康人血浆中的cfDNA,并使用Agilent 2100生物芯片分析仪对cfDNA片段大小和丰度进行评估。同时,我们还使用微滴式数字P... 目的综合评估3种游离核酸(cfDNA)提取试剂盒,以筛选出经济可靠的商品试剂盒。方法我们使用了3种不同的试剂盒提取10名健康人血浆中的cfDNA,并使用Agilent 2100生物芯片分析仪对cfDNA片段大小和丰度进行评估。同时,我们还使用微滴式数字PCR(ddPCR)对cfDNA中的核糖核酸酶P蛋白亚基p30(RPP30)、NADH脱氢酶亚基1(ND1)、NADH脱氢酶亚基4(ND4)基因拷贝数进行定量,并利用实时荧光定量PCR(qPCR)检测cfDNA中藤黄节杆菌序列(ALU)ALU115和ALU247的浓度。此外,我们还在混合血浆中掺入50~766 bp的DNA Ladder,然后使用上述3种提取试剂盒对其进行提取,并使用Agilent 2100生物芯片分析仪分析各DNA片段的浓度,以计算不同试剂盒对不同大小的DNA片段的回收率和提取偏好性。结果3种试剂盒从健康人血浆中纯化的100~300 bp cfDNA浓度分别为(5.10±1.99)、(4.64±3.09)和(1.82±1.29)ng/mL(P=0.006)。Kit A所提取的RPP30拷贝数显著高于Kit C(P=0.018),而Kit A和Kit B所提取的ND1和ND4拷贝数也均显著高于Kit C(P=0.001;P=0.001;P=0.001;P=0.001)。此外,Kit A所提取的cfDNA中,ALU 115和ALU 247的浓度也显著高于Kit C(P=0.009;P=0.003)。3种试剂盒对混合血浆中掺入的外源性DNA Ladder的回收率差异有统计学意义(P<0.001),同时Kit B和Kit C对不同大小的DNA片段也存在提取偏好性。结论Kit A性能最佳,Kit B是一种低成本替代方案,其工作流程更简单省时。 展开更多
关键词 游离dna 提取试剂盒 核酸提取
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Total DNA of Glycyrrhiza uralensis transformed into Hansenula anomala by ion implantation:Preparing Glycyrrhizic acid in recombined yeasts 被引量:1
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作者 Jin Xiang Lue Jie +1 位作者 Ma Yuan Mao Peihong 《Nuclear Science and Techniques》 SCIE CAS CSCD 2010年第6期347-351,共5页
Glycyrrhizic acid(GA) in Glycyrrhiza uralensis(G.uralensis) is physiologically active.In this study,the total DNA of wild G.uralensis was randomly transformed into Hansenula anomala by implantation of low-energy Ar^+ ... Glycyrrhizic acid(GA) in Glycyrrhiza uralensis(G.uralensis) is physiologically active.In this study,the total DNA of wild G.uralensis was randomly transformed into Hansenula anomala by implantation of low-energy Ar^+ and N^+,to produce five recombinant yeast strains relating to biological synthesis of the GA or Glycyrrhetinic acid (GAs).After culturing in liquid medium for 96 h,the resultant GA,18α-GAs and 18β-Gas were determined by reversed-phase high performance liquid chromatography(RP-HPLC),and the corresponding concentrations were 114.49,0.56,and 0.81 mg·L^(-1).After one hundred primers were analyzed with random amplified polymorphic DNA (RAPD),the seven different DNA fragments were produced by the N7059 strain of recombined yeasts,and,the polymerase chain reaction(PCR) verified that one of them came from the genome of G.uralensis,indicating a successful transfer of genetic information by ion implantation. 展开更多
关键词 异常汉逊酵母 dna转化 重组酵母 离子注入 甘草酸 乌拉尔甘草 随机扩增多态性dna 反相高效液相色谱法
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Synthesis and DNA Cleavage Studies of 2,6-Dimethoxyhydroquinone-3-Mercaptoacetic Acid Conjugates
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作者 Yu Fei SONG Pin YANG 《Chinese Chemical Letters》 SCIE CAS CSCD 2001年第8期697-700,共4页
In an effort to investigate the use of short peptide chains as carriers of new anti-tumor agents, we synthesized four tripeptide-cytotoxic agent conjugates: DMQ-MA-Lys(DMQ-MA)-Phe -Arg-Ome, DMQ-MA-Lys(DMQ-MA)-Ile-Arg-... In an effort to investigate the use of short peptide chains as carriers of new anti-tumor agents, we synthesized four tripeptide-cytotoxic agent conjugates: DMQ-MA-Lys(DMQ-MA)-Phe -Arg-Ome, DMQ-MA-Lys(DMQ-MA)-Ile-Arg-Ome, DMQ-MA-Lys(DMQ-MA)-Val-Arg-Ome, DMQ-MA-Lys(DMQ-MA)-Lys(Cbz)-Arg-Ome. The cytotoxic agent conjugated to the N-terminal and the xi -amino group of Lysine of the tripeptide is 2,6-dimethoxyhydroquinone-3-mercaptoacetic acid (DMQ-MA). The tripeptides were synthesized by coupling protected amino acid residues according to Pfp/DCC methods (Pfp: pentafluorophenol, DCC:N,N'-dicyclohexyl-carbodiimide) in solution. Agarose gel electrophoresis showed that these compounds can cleave supercoiled DNA into open-circular form in drug concentration as low as 4-50 mu M without H2O2 and UV irradiation. Further studies on their cytotoxicity for these conjugates are ongoing. 展开更多
关键词 2 6-Dimethoxyhydroquinone-3-mercaptoacetic acid TRIPEPTIDE CLEAVAGE pBR322 dna.
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Improved preparation and identification of aristolochic acid-DNA adducts by solid-phase extraction with liquid chromatography-tandem mass spectrometry
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作者 GAO Haiyan GUO Fangqiu +3 位作者 FENG Feng YIN Junfa SONG Maoyong WANG Hailin 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2009年第12期1769-1776,共8页
Aristolochic acid (AA) is a known nephrotoxin and potential carcinogen, which can form covalent DNA adducts after metabolic activation in vivo and in vitro. A simple method for preparation and characterization of ar... Aristolochic acid (AA) is a known nephrotoxin and potential carcinogen, which can form covalent DNA adducts after metabolic activation in vivo and in vitro. A simple method for preparation and characterization of aristolochic acid-DNA adducts was developed. Four AA-adducts were synthesized by a direct reaction of AAI/AAII with 2′-deoxynucleosides. The reaction mixture was first cleaned-up and pre-concentrated using solid phase extraction (SPE), and further purified by a reversed-phase high performance liquid chromatography (HPLC). By the application of developed SPE procedure, matrices and byproducts in reaction mixture could be greatly reduced and adducts of high purity (more than 94% as indicated by HPLC) were obtained. The purified AA-DNA adducts were identified and characterized with liquid-electrospray ionization-quadrupole-time of flight-mass spectrometry (LC-ESI-Q-TOF-MS/MS) and LC-Diode array detector-fluorescence (LC-DAD-FL) analysis. This work provides a robust tool for possible large-scale preparation of AA-DNA adduct standards, which can promote the further studies on carcinogenic and mutagenic mechanism of aristolochic acids. 展开更多
关键词 aristolochic acid dna adducts solid phase extraction QUADRUPOLE time-of-flight tandem mass spectrometry
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