The cultivar Ganoderma lucidum Hunong 5 was obtained using cross-breeding. Hunong 5 has high commercial value due to its high polysaccharide and triterpene content, This is the first report of using a DNA pooling meth...The cultivar Ganoderma lucidum Hunong 5 was obtained using cross-breeding. Hunong 5 has high commercial value due to its high polysaccharide and triterpene content, This is the first report of using a DNA pooling method to develop a stable sequence characterized amplified region （SCAR） marker for rapid identification of the G. lucidum Hunong 5 cultivar. The SCAR marker was developed by first generating and sequencing a distinctive inter simple sequence repeat （ISSR） fragment （882 bp） from G. lucidum Hunong 5 cultivar. A stable SCAR primer pair GLH5F/GLH5R were obtained to identify the cultivar and the SCAR marker is a DNA fragment of 773 bp.展开更多
In order to study the single nucleotide polymorphisms （SNPs） of growth hormone receptor （GHR） gene in mink populations, genomic DNA pools of Minghua black minks and silver-blue minks were constructed, and the 10^t...In order to study the single nucleotide polymorphisms （SNPs） of growth hormone receptor （GHR） gene in mink populations, genomic DNA pools of Minghua black minks and silver-blue minks were constructed, and the 10^th exon of GHR gene was PCR amplified from the two DNA pools and sequenced. The results showed that two SNPs were found at position 209 （T/C） and position 533 （C/A） of the 10^th exon of GHR gene in the two mink populations.展开更多
目的利用DNA-pool技术对原发性高血压患者进行测序,探索中国原发性高血压患者单核苷酸多态性变异(SNP)情况。方法连续收集2014年3月至2014年6月深圳市孙逸仙心血管医院的高血压门诊患者100例。将基因组DNA片段化处理至400~800bp进行建...目的利用DNA-pool技术对原发性高血压患者进行测序,探索中国原发性高血压患者单核苷酸多态性变异(SNP)情况。方法连续收集2014年3月至2014年6月深圳市孙逸仙心血管医院的高血压门诊患者100例。将基因组DNA片段化处理至400~800bp进行建库测序,将测序结果与NCBI(National Center of Biotechnology Information)人类基因库hg19进行比对。结果共生成120.8Gb原始序列数据,测序深度约为36.13倍,覆盖率达到了99.88%。通过生物信息学分析共检测到4 305 668个SNP点,其中C:G→T:A的变异类型最多,达到12 314个变异位点。结论研究验证了使用DNA-pool的全基因组重排序的方法。研究所得数据也对中国原发性高血压的基因型数据库进行了补充,对未来原发性高血压基因研究提供了一定的帮助。展开更多
The chromosomes 1, 3, 5, 6, 7,10 and 12 of rice field eel (Monopterus albus Zuiew) have been microdissected successfully from meiosis I diakinesis spreads by using glass microneedlc under an inverted microscope. And t...The chromosomes 1, 3, 5, 6, 7,10 and 12 of rice field eel (Monopterus albus Zuiew) have been microdissected successfully from meiosis I diakinesis spreads by using glass microneedlc under an inverted microscope. And the DOP-PCR products of the single chromosome dotted on the nylon membrane as 'specific chromosomal DNA pool', have been hybridized with 6 probes to map these genes. The mapping results show that Zfa has been mapped to chromosome 1, rDNA to chromosomes 3 and 7, both Gh and Pdegγto chromosome 10, Hsl to chromosome 5 and Hox genes have been detected on chromosomes 1, 3, 6 and 10 meantime. It has initiatively been suggested that chromosome 10 of rice field eel might possess the commom conserved synteny to that on chromosome 17 of human, chromosome 11 of mouse, chromosome 12 of pig and chromosome 19 of bovine. And so chromosome 3 of rice field eel might also contain the commom conserved synteny to that on chromosome 2 of zebraf-ish. Our study is an attempt to establish a new and feasible展开更多
在KDC(Key Distribution Center)和DNA多样性的基础上,提出了一种用于密钥预置的DNA模型及其密钥预置(Key Predistribution)机制,然后,在结合密钥池(Key Pool)加密技术优点的基础上,提出了一种传感器网络中基于DNA模型的新对偶密钥建立...在KDC(Key Distribution Center)和DNA多样性的基础上,提出了一种用于密钥预置的DNA模型及其密钥预置(Key Predistribution)机制,然后,在结合密钥池(Key Pool)加密技术优点的基础上,提出了一种传感器网络中基于DNA模型的新对偶密钥建立算法.新算法利用DNA链中寡聚核苷酸编码特性进行密钥预置,任意节点对之间以DNA链进行信息交换,而以DNA链中包含的某段寡聚核苷酸对应的编码作为实际对偶密钥.理论与实验分析表明,与基于多项式、多项式池的密钥预置模型的对偶密钥建立算法相比,新算法具有更好的安全性能,更低的通信开销、以及更高的直接对偶密钥建立概率.因此,是一种更适合传感器网络特点的新型高效对偶密钥建立算法.展开更多
基金financially supported by the National Natural Science Foundation of China (31401933)the Shanghai Municipal Committee of Agriculture,China (G2014070107)
文摘The cultivar Ganoderma lucidum Hunong 5 was obtained using cross-breeding. Hunong 5 has high commercial value due to its high polysaccharide and triterpene content, This is the first report of using a DNA pooling method to develop a stable sequence characterized amplified region （SCAR） marker for rapid identification of the G. lucidum Hunong 5 cultivar. The SCAR marker was developed by first generating and sequencing a distinctive inter simple sequence repeat （ISSR） fragment （882 bp） from G. lucidum Hunong 5 cultivar. A stable SCAR primer pair GLH5F/GLH5R were obtained to identify the cultivar and the SCAR marker is a DNA fragment of 773 bp.
基金Supported by the Foundation for Innovation Team of Special Animal Genetic Resources of Chinese Academy of Agricultural Sciences
文摘In order to study the single nucleotide polymorphisms （SNPs） of growth hormone receptor （GHR） gene in mink populations, genomic DNA pools of Minghua black minks and silver-blue minks were constructed, and the 10^th exon of GHR gene was PCR amplified from the two DNA pools and sequenced. The results showed that two SNPs were found at position 209 （T/C） and position 533 （C/A） of the 10^th exon of GHR gene in the two mink populations.
文摘目的利用DNA-pool技术对原发性高血压患者进行测序,探索中国原发性高血压患者单核苷酸多态性变异(SNP)情况。方法连续收集2014年3月至2014年6月深圳市孙逸仙心血管医院的高血压门诊患者100例。将基因组DNA片段化处理至400~800bp进行建库测序,将测序结果与NCBI(National Center of Biotechnology Information)人类基因库hg19进行比对。结果共生成120.8Gb原始序列数据,测序深度约为36.13倍,覆盖率达到了99.88%。通过生物信息学分析共检测到4 305 668个SNP点,其中C:G→T:A的变异类型最多,达到12 314个变异位点。结论研究验证了使用DNA-pool的全基因组重排序的方法。研究所得数据也对中国原发性高血压的基因型数据库进行了补充,对未来原发性高血压基因研究提供了一定的帮助。
基金This work was supported by the National Natural Science Foundation of China (Grant No. 39970406)the Research Fund for the Doctoral Program of Higher Education of China (Grant No. 98048628).
文摘The chromosomes 1, 3, 5, 6, 7,10 and 12 of rice field eel (Monopterus albus Zuiew) have been microdissected successfully from meiosis I diakinesis spreads by using glass microneedlc under an inverted microscope. And the DOP-PCR products of the single chromosome dotted on the nylon membrane as 'specific chromosomal DNA pool', have been hybridized with 6 probes to map these genes. The mapping results show that Zfa has been mapped to chromosome 1, rDNA to chromosomes 3 and 7, both Gh and Pdegγto chromosome 10, Hsl to chromosome 5 and Hox genes have been detected on chromosomes 1, 3, 6 and 10 meantime. It has initiatively been suggested that chromosome 10 of rice field eel might possess the commom conserved synteny to that on chromosome 17 of human, chromosome 11 of mouse, chromosome 12 of pig and chromosome 19 of bovine. And so chromosome 3 of rice field eel might also contain the commom conserved synteny to that on chromosome 2 of zebraf-ish. Our study is an attempt to establish a new and feasible
文摘在KDC(Key Distribution Center)和DNA多样性的基础上,提出了一种用于密钥预置的DNA模型及其密钥预置(Key Predistribution)机制,然后,在结合密钥池(Key Pool)加密技术优点的基础上,提出了一种传感器网络中基于DNA模型的新对偶密钥建立算法.新算法利用DNA链中寡聚核苷酸编码特性进行密钥预置,任意节点对之间以DNA链进行信息交换,而以DNA链中包含的某段寡聚核苷酸对应的编码作为实际对偶密钥.理论与实验分析表明,与基于多项式、多项式池的密钥预置模型的对偶密钥建立算法相比,新算法具有更好的安全性能,更低的通信开销、以及更高的直接对偶密钥建立概率.因此,是一种更适合传感器网络特点的新型高效对偶密钥建立算法.
