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Affiliation of Dihydrolipoyl Dehydrogenase Allozymes in Mycorrhizae of European Forest Trees and Characterization of the Enzyme of the Matt Bolete (<i>Xerocomus pruinatus</i>) and the Bay Bolete (<i>X. badius</i>)
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作者 Uwe Schirkonyer Gunter M.Rothe 《Open Journal of Ecology》 2018年第6期356-377,共22页
Mycorrhizal roots of the deciduous trees European beech (Fagus sylvatica (L.)) and Sessile oak (Quercus petraea (MattuschkaLiebl.)) and the conifers Norway spruce (Picea abies (L.) H. Karst.) and European larch (Larix... Mycorrhizal roots of the deciduous trees European beech (Fagus sylvatica (L.)) and Sessile oak (Quercus petraea (MattuschkaLiebl.)) and the conifers Norway spruce (Picea abies (L.) H. Karst.) and European larch (Larix decidua (Mill.)) associated with the ectomycorrhizal fungi matt bolete (Xerocomus pruinatus (Fries 1835)) or bay bolete (X. badius (Fries 1818)) were analysed with respect to the occurrence of dihydrolipoyl dehydrogenase (EC 1.8.1.4) allozymes. In root tissues of the two deciduous trees, two gene loci could be visualized after cellulose acetate electrophoresis while three loci were expressed in root tissues of the two coniferous species. The two fungal species and further ectomycorrhizal fungi expressed exclusively one dihydrolipoyl dehydrogenase gene. In Xerocomus pruinatus and X. badius, the dihydrolipoyl dehydrogenase gene consists of 1460 bp and 1370 bp, respectively, including five introns each consisting of 52 bp. Their DNA sequences correspond to 70 to 90% to other fungal dihydrolipoyl dehydrogenase genes. One monomer of the dimeric dihydrolipoyl dehydrogenase enzyme consists of 486 (X. pruinatus) or 454 (X. badius) amino acids which sum up to a molecular mass of 55 kDa (X. pruinatus), respectively 52 kDa (X. badius). The number of positively charged amino acid residues makes 79 (X. pruinatus) and 68 (X. badius) and the number of negatively charged amino acid residues was calculated to make 46 (X. pruinatus) and 48 (X. badius);isoelectric points make 9.99 (X. pruinatus) and 9.68 (X. badius). Calculated three dimensional structures reveal a short NADH binding site being part of a larger FAD-binding site and a binding/dimerization domain. 展开更多
关键词 Amino Acid SEQUENCE cDNA ECTOMYCORRHIZAE Fagus sylvatica Gene SEQUENCE Larix decidua mRNA dihydrolipoyl DEHYDROGENASE Picea abies Quercus petraea Xerocomus pruinatus Xerocomus badius
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New insights into the pathogenesis of primary biliary cholangitis asymptomatic stage 被引量:1
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作者 Vasiliy Ivanovich Reshetnyak Igor Veniaminovich Maev 《World Journal of Gastroenterology》 SCIE CAS 2023年第37期5292-5304,共13页
Primary biliary cholangitis(PBC)is a chronic cholestatic progressive liver disease and one of the most important progressive cholangiopathies in adults.Damage to cholangiocytes triggers the development of intrahepatic... Primary biliary cholangitis(PBC)is a chronic cholestatic progressive liver disease and one of the most important progressive cholangiopathies in adults.Damage to cholangiocytes triggers the development of intrahepatic cholestasis,which progresses to cirrhosis in the terminal stage of the disease.Accumulating data indicate that damage to biliary epithelial cells[(BECs),cholangiocytes]is most likely associated with the intracellular accumulation of bile acids,which have potent detergent properties and damaging effects on cell membranes.The mechanisms underlying uncontrolled bile acid intake into BECs in PBC are associated with pH change in the bile duct lumen,which is controlled by the bicarbonate(HCO3-)buffer system“biliary HCO3-umbrella”.The impaired production and entry of HCO3-from BECs into the bile duct lumen is due to epigenetic changes in expression of the X-linked microRNA 506.Based on the growing body of knowledge on the molecular mechanisms of cholangiocyte damage in patients with PBC,we propose a hypothesis explaining the pathogenesis of the first morphologic(ductulopenia),immunologic(antimitochondrial autoantibodies)and clinical(weakness,malaise,rapid fatigue)signs of the disease in the asymptomatic stage.This review focuses on the consideration of these mechanisms. 展开更多
关键词 Primary biliary cholangitis Antimitochondrial autoantibodies MicroRNA 506 Inositol-1 4 5-trisphosphate receptor type 3 Chloride/bicarbonate anion exchanger 2 Biliary bicarbonate umbrella dihydrolipoyl transacetylase(E2 subunit) Pyruvate dehydrogenase complex
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大肠杆菌二氢硫辛酸转乙酰基酶的外周亚基结合结构域的溶液构象 被引量:2
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作者 龚泽茂 邱水 +1 位作者 王媛媛 陶虎 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2015年第6期624-629,共6页
丙酮酸脱氢酶复合体催化丙酮酸氧化脱羧,生成乙酰辅酶A.该复合体由丙酮酸脱羧酶(E1)、二氢硫辛酸乙酰转移酶(E2)和二氢硫辛酸脱氢酶(E3)三种酶组成.大肠杆菌E2的外周亚基结合结构域(peripheral subunit-binding domain,PSBD)结合E1和E3... 丙酮酸脱氢酶复合体催化丙酮酸氧化脱羧,生成乙酰辅酶A.该复合体由丙酮酸脱羧酶(E1)、二氢硫辛酸乙酰转移酶(E2)和二氢硫辛酸脱氢酶(E3)三种酶组成.大肠杆菌E2的外周亚基结合结构域(peripheral subunit-binding domain,PSBD)结合E1和E3,对丙酮酸脱氢酶复合物的结构和功能有重要作用.本研究采用PCR技术扩增了E2的PSBD的48个氨基酸残基区域编码序列(c DNA),构建p ET-32a-pp-Psbd表达载体,测序正确后转入BL21(DE3)中表达,目的蛋白质用镍柱和Hi Trap SP柱纯化后达到电泳纯,质谱鉴定纯化后蛋白质分子量与理论值符合.pull-down结果表明,PSBD可分别与E1和E3结合.圆二色谱表征PSBD的二级结构主要为a-螺旋,当在0.5mol/L Na Cl的离子强度下,55.7%的PSBD分子折叠为正确的构象.动态光散射实验发现,PSBD分子有3种不同的构象存在形式,因此,PSBD非常容易从折叠态转化为不和E1、E3结合的无规卷曲态,这种构象的相互转化为其功能性与E1、E3结合及解离提供了结构基础. 展开更多
关键词 二氢硫辛酸乙酰基转移酶 外周结合结构域 圆二色谱 构象 动态光散射
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