Polyploidization in plants often leads to increased cell size and grain size,which may be affected by the increased genome dosage and transcription abundance.The synthesized Triticum durum(AABB)-Hay-naldia villosa(WM)...Polyploidization in plants often leads to increased cell size and grain size,which may be affected by the increased genome dosage and transcription abundance.The synthesized Triticum durum(AABB)-Hay-naldia villosa(WM)amphiploid(AABBM)has significantly increased grain size,especially grain length,than the tetraploid and diploid parents.To investigate how polyploidization affects grain development at the transcriptional level,we perform transcriptome analysis using the immature seeds of T.durum,H.villosa,and the amphiploid.The dosage effect genes are contributed more by differentially expressed genes from genome V of H.villosa.The dosage effect genes overrepresent grain development-related genes.Inter-estingly,the vernalization gene TaVRN1 is among the positive dosage effect genes in the T.durum-H.villosa and T.turgidum-Ae.tauschii amphiploids.The expression levels of TaVRN1 homologs are positively correlated with the grain size and weight.The TaVRN1-B1 or TaVRN1-D1 mutation shows delayed florescence,decreased cell size,grain size,and grain yield.These data indicate that dosage effect genes could be one of the important explanations for increased grain size by regulating grain development.The identification and functional validation of dosage effect genes may facilitate the finding of valuable genes for improvingwheat yield.展开更多
Intractable Still’s disease, namely the intractable systemic juvenile idiopathic arthritis (JIA) is a clinical difficulty of pediatrics, and so far there still lacks any special treatment. In virtue of the markedly a...Intractable Still’s disease, namely the intractable systemic juvenile idiopathic arthritis (JIA) is a clinical difficulty of pediatrics, and so far there still lacks any special treatment. In virtue of the markedly anti-inflammatory and immunosuppres-sive effects of tripterygium glycosides (TG, product of Huangshi Pharmaceutical Factory, 10 mg/展开更多
Recent progress in bioinorganic chemistry studies of rare earth elements (REE) in animal cells was outlined, and the definition of REE′s biological intelligence as well as their mechanism were also explained. The mig...Recent progress in bioinorganic chemistry studies of rare earth elements (REE) in animal cells was outlined, and the definition of REE′s biological intelligence as well as their mechanism were also explained. The migration of REE from weathering rocks to the environment is accelerated by various anthropogenic activities, which can eventually result in the entrance of REE into animal and human bodies via food chain. REE can be found in body tissues such as brain, blood, muscle as well as bone. Based on their geochemical properties, REE in low dose show their unique biological intelligence by intervening in the process of signal transduction and its regulation, arteriosclerosis and blood clotting prevention, anticancer, and the promotion of cellular defense enzymes′ activities, nucleic acid metabolism enzymes as well as ATPases, etc. The meaning of REE′s biological intelligence refers to physicochemical properties-based capability to choose the targets (e.g., biometals) in biomolecules for the chelation or replacement of REE, and change the structures and functions of biomolecules, and consequently impact or control the biological functions or behaviors in living organisms. The regulation of various cellular processes caused by REE is mainly via antagonism or replacement of essential target biometals like calcium or via chelation of organic molecules, thereby embodying the unparalleled biological intelligence of REE. Additionally, the dosage effect of REE was also discussed from the angles of yin-yang dichotomy, bioavailability, entropy and evolution. In order to make full use of REE′s biological intelligence in the application for medicine, more detailed studies concerning dosage effect of REE and REE bioaccumulation in organisms should be conducted in future research.展开更多
Rare earth elements (REE) and their compounds years. The bioinorganic chemical research of REE during the are widely applied in agronomic and medical fields for many past few years indicates that REE play important ...Rare earth elements (REE) and their compounds years. The bioinorganic chemical research of REE during the are widely applied in agronomic and medical fields for many past few years indicates that REE play important roles in the promotion of photosynthetic rate as well as root absorption, regulation of hormone and nitrogen metabolism, and suppression of microbes, etc. The metallic or non-metallic targets of key biomolecule in various physiological processes can be chosen by REE for the chelation or replacement, which enables REE to regulate the biological functions or behaviors of those biomolecule and consequently leads to significant embodiment of biological function of REE in plants and microbes. Overdose of REE, however, shows an inhibitory effect on living organisms. Therefore, this paper proposes two suggestions that will be available in the extension of full use of REE's biological function. One is to obey the dose law of REE and control REE concentrations within a safe range. The other is to further test the bioaccumulation and long-period influence of REE on organisms.展开更多
The maize quadraplex tetraploids and duplex tetraploids were developed using Kato’s protocols. The phenotype ofheterosis and inbreeding depression over generations in their parents and progenies of F1, F2 and F3 were...The maize quadraplex tetraploids and duplex tetraploids were developed using Kato’s protocols. The phenotype ofheterosis and inbreeding depression over generations in their parents and progenies of F1, F2 and F3 were investigated.The results indicated that different duplex tetraploids have different genetic backgrounds, but they acquire maximumheterosis at same traits, such as the leaf length, leaf width, culm circumference and days to flowering. P.N. rises muchfaster from the F2 to F3 segment than the A.W. does for the plant height in duplex tetraploids. In comparing duplex andquadraplex over a generation the quadriplex is showing the greatest heterosis in plant height, leaf height, leaf width anddays to flowering. Most of the examples achieve the maximum heterosis at Qu F2, with the exception of culm circumference,which achieves greatest heterosis at PNAW F1. Meanwhile, this experiment shows that quadraplex tetraploids has distinctadditional favorable alleles that are not contained in duplex tetraploid, this is demonstrated by the heterosis found incrosses between the two duplex tetraploid. This finding helps explain quadraploids superiority and unique breedingbehavior, in which, the progressive heterosis and inbreeding depression in maize are due mainly to linkage disequilibrium.The severe inbreeding depression in duplex tetraploids is due mainly to the rapid loss of complementary chromosomes orgenes interactions in the first few generation of inbreeding. Correspondingly, the progressive heterosis in quadraplextetraploids is due mainly to a progressive increase in complementarities of homologous chromosomes or genes interactions.Greater complementarities of homologous chromosomes or genes interactions in tetraploids maize alse helps explainrecent molecular biology research indicating that some of traits in quadraplex tetraploids are more responsive to geneticdiversity than in duplex tetraploids. In addition, the dosage effect of polyploid in relation to the genetic basis of heterosisand inbreeding depression were discussed also.展开更多
Dosage compensation refers to the equal expression between the sexes despite the fact that the dosage of the X chromosome is different in males and females.In Drosophila there is a twofold upregulation of the single m...Dosage compensation refers to the equal expression between the sexes despite the fact that the dosage of the X chromosome is different in males and females.In Drosophila there is a twofold upregulation of the single male X.In triple X metafemales,there is also dosage compensation,which occurs by a two-thirds downregulation.There is a concomitant reduction in expression of many autosomal genes in metafemales.The male specific lethal(MSL)complex is present on the male X chromosome.Evidence is discussed showing that the MSL complex sequesters a histone acetyltransferase to the X chromosome to mute an otherwise increased expression by diminishing the histone acetylation on the autosomes.Several lines of evidence indicate that a constraining activity occurs from the MSL complex to prevent overcompensation on the X that might otherwise occur from the high level of acetylation present.Together,the evidence suggests that dosage compensation is a modification of a regulatory inverse dosage effect that is a reflection of intrinsic gene regulatory mechanisms and that the MSL complex has evolved in reaction in order to equalize the expression on both the X and autosomes of males and females.展开更多
In biological systems,molecular assembly primarily relies on the assistance of molecular chaperones.Inspired by nature,strategies like‘chaperone-assisted assembly’and‘catalyzed assembly’have been proposed for the ...In biological systems,molecular assembly primarily relies on the assistance of molecular chaperones.Inspired by nature,strategies like‘chaperone-assisted assembly’and‘catalyzed assembly’have been proposed for the sophisticated control of molecular assembly.Nonetheless,significant challenges remain in the rational design of such systems,calling for a deep understanding of underlying principles.Herein,we demonstrate an artificial chaperone serves a dual role,that is catalyst in low dosages and inhibitor in high dosages,in regulating the supramolecular polymerization of peptides.Low dosages of carboxymethyl cellulose,as the chaperones,catalyze the assembly of Aβ_(16-22) peptides into fibrils through multi-step phase separation,while high dosages trap the peptides into coacervate intermediates and therefore inhibit the fibrillation.Consequently,the quantity of chaperones does not follow the intuition that‘more is better’for catalyzing assembly but instead has an optimal molar ratio.Investigation reveals that the interplay and evolution of electrostatic and hydrophobic interactions are the keys to achieving these processes.This study provides insights into the multifaceted roles artificial chaperones may play in a dosage-dependent manner and enriches the toolkit for efficient and controllable construction of complex assembly systems.展开更多
基金This work was financially supported by the National Key Research and Development Program of China(Grant No.2022YFF1002900 and 2020YFE0202900)the National Natural Science Foundation of China(32270576)+4 种基金Jiangsu Provincial Key Research and Development Program(BE2022346)Seed Industry Revitalization Project of Jiangsu Province(JBGS[2021]006 and JBGS[2021]013)the Jiangsu Agricultural Technology System(JATS[2023]422)the Joint Research of Wheat Variety Improvement of AnhuiZhongshan Biological Breeding Laboratory(ZSBBL)(ZSBBL-KY2023-02-2)。
文摘Polyploidization in plants often leads to increased cell size and grain size,which may be affected by the increased genome dosage and transcription abundance.The synthesized Triticum durum(AABB)-Hay-naldia villosa(WM)amphiploid(AABBM)has significantly increased grain size,especially grain length,than the tetraploid and diploid parents.To investigate how polyploidization affects grain development at the transcriptional level,we perform transcriptome analysis using the immature seeds of T.durum,H.villosa,and the amphiploid.The dosage effect genes are contributed more by differentially expressed genes from genome V of H.villosa.The dosage effect genes overrepresent grain development-related genes.Inter-estingly,the vernalization gene TaVRN1 is among the positive dosage effect genes in the T.durum-H.villosa and T.turgidum-Ae.tauschii amphiploids.The expression levels of TaVRN1 homologs are positively correlated with the grain size and weight.The TaVRN1-B1 or TaVRN1-D1 mutation shows delayed florescence,decreased cell size,grain size,and grain yield.These data indicate that dosage effect genes could be one of the important explanations for increased grain size by regulating grain development.The identification and functional validation of dosage effect genes may facilitate the finding of valuable genes for improvingwheat yield.
文摘Intractable Still’s disease, namely the intractable systemic juvenile idiopathic arthritis (JIA) is a clinical difficulty of pediatrics, and so far there still lacks any special treatment. In virtue of the markedly anti-inflammatory and immunosuppres-sive effects of tripterygium glycosides (TG, product of Huangshi Pharmaceutical Factory, 10 mg/
文摘Recent progress in bioinorganic chemistry studies of rare earth elements (REE) in animal cells was outlined, and the definition of REE′s biological intelligence as well as their mechanism were also explained. The migration of REE from weathering rocks to the environment is accelerated by various anthropogenic activities, which can eventually result in the entrance of REE into animal and human bodies via food chain. REE can be found in body tissues such as brain, blood, muscle as well as bone. Based on their geochemical properties, REE in low dose show their unique biological intelligence by intervening in the process of signal transduction and its regulation, arteriosclerosis and blood clotting prevention, anticancer, and the promotion of cellular defense enzymes′ activities, nucleic acid metabolism enzymes as well as ATPases, etc. The meaning of REE′s biological intelligence refers to physicochemical properties-based capability to choose the targets (e.g., biometals) in biomolecules for the chelation or replacement of REE, and change the structures and functions of biomolecules, and consequently impact or control the biological functions or behaviors in living organisms. The regulation of various cellular processes caused by REE is mainly via antagonism or replacement of essential target biometals like calcium or via chelation of organic molecules, thereby embodying the unparalleled biological intelligence of REE. Additionally, the dosage effect of REE was also discussed from the angles of yin-yang dichotomy, bioavailability, entropy and evolution. In order to make full use of REE′s biological intelligence in the application for medicine, more detailed studies concerning dosage effect of REE and REE bioaccumulation in organisms should be conducted in future research.
文摘Rare earth elements (REE) and their compounds years. The bioinorganic chemical research of REE during the are widely applied in agronomic and medical fields for many past few years indicates that REE play important roles in the promotion of photosynthetic rate as well as root absorption, regulation of hormone and nitrogen metabolism, and suppression of microbes, etc. The metallic or non-metallic targets of key biomolecule in various physiological processes can be chosen by REE for the chelation or replacement, which enables REE to regulate the biological functions or behaviors of those biomolecule and consequently leads to significant embodiment of biological function of REE in plants and microbes. Overdose of REE, however, shows an inhibitory effect on living organisms. Therefore, this paper proposes two suggestions that will be available in the extension of full use of REE's biological function. One is to obey the dose law of REE and control REE concentrations within a safe range. The other is to further test the bioaccumulation and long-period influence of REE on organisms.
基金This study was in part supported by the Scientific Research Foundation for the Returned Overseas Chinese Scholars of Education Ministry of Chinaa grant from the Department of Energy Biosciences,USA,to University of Columbia,JB.
文摘The maize quadraplex tetraploids and duplex tetraploids were developed using Kato’s protocols. The phenotype ofheterosis and inbreeding depression over generations in their parents and progenies of F1, F2 and F3 were investigated.The results indicated that different duplex tetraploids have different genetic backgrounds, but they acquire maximumheterosis at same traits, such as the leaf length, leaf width, culm circumference and days to flowering. P.N. rises muchfaster from the F2 to F3 segment than the A.W. does for the plant height in duplex tetraploids. In comparing duplex andquadraplex over a generation the quadriplex is showing the greatest heterosis in plant height, leaf height, leaf width anddays to flowering. Most of the examples achieve the maximum heterosis at Qu F2, with the exception of culm circumference,which achieves greatest heterosis at PNAW F1. Meanwhile, this experiment shows that quadraplex tetraploids has distinctadditional favorable alleles that are not contained in duplex tetraploid, this is demonstrated by the heterosis found incrosses between the two duplex tetraploid. This finding helps explain quadraploids superiority and unique breedingbehavior, in which, the progressive heterosis and inbreeding depression in maize are due mainly to linkage disequilibrium.The severe inbreeding depression in duplex tetraploids is due mainly to the rapid loss of complementary chromosomes orgenes interactions in the first few generation of inbreeding. Correspondingly, the progressive heterosis in quadraplextetraploids is due mainly to a progressive increase in complementarities of homologous chromosomes or genes interactions.Greater complementarities of homologous chromosomes or genes interactions in tetraploids maize alse helps explainrecent molecular biology research indicating that some of traits in quadraplex tetraploids are more responsive to geneticdiversity than in duplex tetraploids. In addition, the dosage effect of polyploid in relation to the genetic basis of heterosisand inbreeding depression were discussed also.
基金supported by National Institutes of Health grant RO1GM068042-05.
文摘Dosage compensation refers to the equal expression between the sexes despite the fact that the dosage of the X chromosome is different in males and females.In Drosophila there is a twofold upregulation of the single male X.In triple X metafemales,there is also dosage compensation,which occurs by a two-thirds downregulation.There is a concomitant reduction in expression of many autosomal genes in metafemales.The male specific lethal(MSL)complex is present on the male X chromosome.Evidence is discussed showing that the MSL complex sequesters a histone acetyltransferase to the X chromosome to mute an otherwise increased expression by diminishing the histone acetylation on the autosomes.Several lines of evidence indicate that a constraining activity occurs from the MSL complex to prevent overcompensation on the X that might otherwise occur from the high level of acetylation present.Together,the evidence suggests that dosage compensation is a modification of a regulatory inverse dosage effect that is a reflection of intrinsic gene regulatory mechanisms and that the MSL complex has evolved in reaction in order to equalize the expression on both the X and autosomes of males and females.
基金National Natural Science Foundation of China(NSFC),Grant/Award Numbers:21991130,21991131,21971216,21971217,22372139,22250004Fundamental Research Funds for the Central Universities of China,Grant/Award Number:20720210007。
文摘In biological systems,molecular assembly primarily relies on the assistance of molecular chaperones.Inspired by nature,strategies like‘chaperone-assisted assembly’and‘catalyzed assembly’have been proposed for the sophisticated control of molecular assembly.Nonetheless,significant challenges remain in the rational design of such systems,calling for a deep understanding of underlying principles.Herein,we demonstrate an artificial chaperone serves a dual role,that is catalyst in low dosages and inhibitor in high dosages,in regulating the supramolecular polymerization of peptides.Low dosages of carboxymethyl cellulose,as the chaperones,catalyze the assembly of Aβ_(16-22) peptides into fibrils through multi-step phase separation,while high dosages trap the peptides into coacervate intermediates and therefore inhibit the fibrillation.Consequently,the quantity of chaperones does not follow the intuition that‘more is better’for catalyzing assembly but instead has an optimal molar ratio.Investigation reveals that the interplay and evolution of electrostatic and hydrophobic interactions are the keys to achieving these processes.This study provides insights into the multifaceted roles artificial chaperones may play in a dosage-dependent manner and enriches the toolkit for efficient and controllable construction of complex assembly systems.