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Application of Artificially Induced Double-strand Breaks (DSB) and Triplex-forming Oligonucleotides (TFO) in the Improvement of Gene Targeting Efficiency
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作者 Hegang LI Wenke CHENG +5 位作者 Ke JIANG Xiaoli REN Yongping JIANG Lele HOU Xiaojing HAO Jinshan ZHAO 《Agricultural Biotechnology》 CAS 2013年第1期1-6,12,共7页
Gene targeting technology is an important means to investigate gene functions, but its efficiency of gene targeting is very low, especially for somatic cell targeting. Artificially induced double-strand breaks (DSB)... Gene targeting technology is an important means to investigate gene functions, but its efficiency of gene targeting is very low, especially for somatic cell targeting. Artificially induced double-strand breaks (DSB) and triplex forming oligonucleotide (TFO) are currently developed methods to improve the targeting efficiency. This paper summarized the basic principles, design ideas and application in gene targeting efficiency improvement of these two methods, analyzed and com- pared their characteristics, and finally proposed prospects for their future development. 展开更多
关键词 Gene targeting double-strand breaks Zinc finger nuclease Homing endonuclease Triplex-forming oligonucleotides
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DNA Double-Strand Breaks,Potential Targets for HBV Integration 被引量:2
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作者 胡晓文 林菊生 +4 位作者 谢琼慧 任精华 常莹 吴文杰 夏羽佳 《Journal of Huazhong University of Science and Technology(Medical Sciences)》 SCIE CAS 2010年第3期265-270,共6页
Hepatitis B virus(HBV)-induced hepatocellular carcinoma(HCC) is one of the most fre-quently occurring cancers.Hepadnaviral DNA integrations are considered to be essential agents which can promote the process of the he... Hepatitis B virus(HBV)-induced hepatocellular carcinoma(HCC) is one of the most fre-quently occurring cancers.Hepadnaviral DNA integrations are considered to be essential agents which can promote the process of the hepatocarcinogenesis.More and more researches were designed to find the relationship of the two.In this study,we investigated whether HBV DNA integration occurred at sites of DNA double-strand breaks(DSBs),one of the most detrimental DNA damage.An 18-bp I-SceI homing endonuclease recognition site was introduced into the DNA of HepG2 cell line by stable DNA transfection,then cells were incubated in patients’ serum with high HBV DNA copies and at the same time,DSBs were induced by transient expression of I-SceI after transfection of an I-SceI expression vector.By using nest PCR,the viral DNA was detected at the sites of the break.It appeared that integra-tion occurred between part of HBV x gene and the I-SceI induced breaks.The results suggested that DSBs,as the DNA damages,may serve as potential targets for hepadnaviral DNA insertion and the integrants would lead to widespread host genome changes necessarily.It provided a new site to investi-gate the integration. 展开更多
关键词 DNA double-strand breaks hepatitis B virus INTEGRATION non-homologous end joining
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Maternal gene Ooep may participate in homologous recombination-mediated DNA double-strand break repair in mouse oocytes 被引量:1
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作者 Da-Jian He Lin Wang +5 位作者 Zhi-Bi Zhang Kun Guo Jing-Zheng Li Xie-Chao He Qing-Hua Cui Ping Zheng 《Zoological Research》 SCIE CAS CSCD 2018年第6期387-395,共9页
DNA damage in oocytes can cause infertility and birth defects. DNA double-strand breaks (DSBs) are highly deleterious and can substantially impair genome integrity. Homologous recombination (HR)-mediated DNA DSB r... DNA damage in oocytes can cause infertility and birth defects. DNA double-strand breaks (DSBs) are highly deleterious and can substantially impair genome integrity. Homologous recombination (HR)-mediated DNA DSB repair plays dominant roles in safeguarding oocyte quantity and quality. However, little is known regarding the key players of the HR repair pathway in oocytes. Here, we identified oocyte-specific gene Ooep as a novel key component of the HR repair pathway in mouse oocytes. OOEP was required for efficient ataxia telangiectasia mutated (ATM) kinase activation and Rad51 recombinase (RAD51) focal accumulation at DNA DSBs. Ooep null oocytes were defective in DNA DSB repair and prone to apoptosis upon exogenous DNA damage insults. Moreover, Ooep null oocytes exhibited delayed meiotic maturation. Therefore, OOEP played roles in preserving oocyte quantity and quality by maintaining genome stability. Ooep expression decreased with the advance of maternal age, suggesting its involvement in maternal aging. 展开更多
关键词 Ooep Homologous recombination DNA double-strand break repair ATM RAD51
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Double-stranded DNA breaks and gene functions in recombination and meiosis 被引量:1
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作者 Wuxing Li Hong Ma 《Cell Research》 SCIE CAS CSCD 2006年第5期402-412,共11页
Meiotic prophase I is a long and complex phase. Homologous recombination is an important process that occurs between homologous chromosomes during meiotic prophase I. Formation of chiasmata, which hold homologous chro... Meiotic prophase I is a long and complex phase. Homologous recombination is an important process that occurs between homologous chromosomes during meiotic prophase I. Formation of chiasmata, which hold homologous chromosomes together until the metaphase I to anaphase I transition, is critical for proper chromosome segregation. Recent studies have suggested that the SPO 11 proteins have conserved functions in a number of organisms in generating sites of double-stranded DNA breaks (DSBs) that are thought to be the starting points of homologous recombination. Processing of these sites of DSBs requires the function of RecA homologs, such as RAD5 1, DMC 1, and others, as suggested by mutant studies; thus the failure to repair these meiotic DSBs results in abnormal chromosomal alternations, leading to disrupted meiosis. Recent discoveries on the functions of these RecA homologs have improved the understanding of the mechanisms underlying meiotic homologous recombination. 展开更多
关键词 MEIOSIS homologous recombination double-stranded DNA breaks SPO11 RAD51 DMC 1
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Exposure to Long Magnetic Resonance Imaging Thermometry Does Not Cause Significant DNA Double-Strand Breaks on CF-1 Mice
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作者 Christopher Brian Abraham Sepideh Dadgar +2 位作者 Wely B. Floriano Michael Campbell Laura Curiel 《Journal of Modern Physics》 2022年第6期839-850,共12页
The purpose of the study was to investigate if the high gradient strength and slew rate used for long MRI-thermometry monitoring could cause DNA double-stranded breaks (DSBs). To this end, an enzyme-linked immunosorbe... The purpose of the study was to investigate if the high gradient strength and slew rate used for long MRI-thermometry monitoring could cause DNA double-stranded breaks (DSBs). To this end, an enzyme-linked immunosorbent assay (ELISA) was used to quantify &gamma;H2AX, a molecular marker for DSBs, in the blood of mice after a 6-hour exposure to magnetic resonance imaging (MRI). Fourteen CF-1 female mice were separated into 4 experimental groups: Untreated negative control, MRI-treated, MRI-Control, and exposed to ionizing radiation positive control. Untreated negative control was used as a baseline for ELISA to quantify &gamma;H2AX. MRI-treated consisted of a 6-hour continuous magnetic resonance imaging (MRI) echo planar imaging (EPI) sequence with a slew rate of 192 mT/m/s constituting a significantly longer imaging time than routine clinical imaging. MRI-control mice were maintained under the same conditions outside the MRI scanner for 6-hours. Mice in the irradiation group served as a positive control of DSBs and were exposed to either 2 Gy, 5 Gy or 10 Gy of ionizing radiation. DSBs in the blood lymphocytes from the treatment groups were analyzed using the &gamma;H2AX ELISA and compared. Total protein concentration in lysates was determined for each blood sample and averaged 1 ± 0.35 mg/mL. Irradiated positive controls were used to test radiation dose-dependency of the &gamma;H2AX ELISA assay where a linear dependency on radiation exposure was observed (r<sup>2</sup> = 0.93) between untreated and irradiated samples. Mean and standard error mean of &gamma;H2AX formation were calculated and compared between each treatment group. Repeated measures 1-way ANOVA showed statistically significant differences between the means of irradiated controls and both the MRI-control and MRI-treated groups. There was no statistically significant difference between the MRI-treated samples and the MRI-control groups. Our results show that long MRI exposure at a high slew rate did not cause increased levels of &gamma;H2AX when compared to control mice, suggesting that no increase in DSBs was caused by the long MR thermometry imaging session. The novelty of this work contradicts other studies that have suggested MRI may cause DSBs;this work suggests an alternative cause of DNA damage. 展开更多
关键词 γH2AX DNA Damage MRI Thermometry GADOLINIUM double-stranded breaks (dsbs) ELISA Ionizing Radiation
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Low testing rates and high BRCA prevalence: Poly (ADP-ribose) polymerase inhibitor use in Middle East BRCA/homologous recombination deficiency-positive cancer patients
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作者 Naveed Syed Ashish Vittalrao Chintakuntlawar +6 位作者 Deepti Vilasini Aisha Mohamed Al Salami Riad Al Hasan Imrana Afrooz Kanishka Uttam Chandani Ashok Uttam Chandani Aref Chehal 《World Journal of Clinical Oncology》 2024年第7期848-858,共11页
BACKGROUND Poly(ADP-ribose)polymerase inhibitors(PARPis)are approved as first-line therapies for breast cancer gene(BRCA)-positive,human epidermal growth factor receptor 2-negative locally advanced or metastatic breas... BACKGROUND Poly(ADP-ribose)polymerase inhibitors(PARPis)are approved as first-line therapies for breast cancer gene(BRCA)-positive,human epidermal growth factor receptor 2-negative locally advanced or metastatic breast cancer.They are also effective for new and recurrent ovarian cancers that are BRCA-or homologous recombination deficiency(HRD)-positive.However,data on these mutations and PARPi use in the Middle East are limited.AIM To assess BRCA/HRD prevalence and PARPi use in patients in the Middle East with breast/ovarian cancer.METHODS This was a single-center retrospective study of 57 of 472 breast cancer patients tested for BRCA mutations,and 25 of 65 ovarian cancer patients tested for HRD.These adult patients participated in at least four visits to the oncology service at our center between August 2021 and May 2023.Data were summarized using descriptive statistics and compared using counts and percentages.Response to treatment was assessed using Response Evaluation Criteria in Solid Tumors criteria.RESULTS Among the 472 breast cancer patients,12.1%underwent BRCA testing,and 38.5%of 65 ovarian cancer patients received HRD testing.Pathogenic mutations were found in 25.6%of the tested patients:26.3%breast cancers had germline BRCA(gBRCA)mutations and 24.0%ovarian cancers showed HRD.Notably,40.0%of gBRCA-positive breast cancers and 66.0%of HRD-positive ovarian cancers were Middle Eastern and Asian patients,respectively.PARPi treatment was used in 5(33.3%)gBRCA-positive breast cancer patients as first-line therapy(n=1;7-months progression-free),for maintenance(n=2;>15-months progression-free),or at later stages due to compliance issues(n=2).Four patients(66.6%)with HRD-positive ovarian cancer received PARPi and all remained progression-free.CONCLUSION Lower testing rates but higher BRCA mutations in breast cancer were found.Ethnicity reflected United Arab Emirates demographics,with breast cancer in Middle Eastern and ovarian cancer in Asian patients. 展开更多
关键词 Homologous recombination repair BRCA1 BRCA2 Homologous recombination deficiency Ovarian cancer Breast cancer Poly(ADP-ribose)polymerase inhibitors OLAPARIB DNA double-strand breaks
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与真核生物DSBs修复有关的NHEJ途径研究进展 被引量:3
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作者 虞海燕 梁锋 杨志伟 《生物技术通报》 CAS CSCD 北大核心 2009年第10期55-59,共5页
DNA双链断裂是真核生物最严重的DNA损伤形式。如果断裂的DNA双链无法及时修复,将可能导致细胞死亡。非同源末端连接途径在真核生物DSBs修复中起重要作用。综述了真核生物NHEJ途径中核心蛋白质Ku、DNA-PKcs、DNA连接酶IV、XRCC4、ARTEMIS... DNA双链断裂是真核生物最严重的DNA损伤形式。如果断裂的DNA双链无法及时修复,将可能导致细胞死亡。非同源末端连接途径在真核生物DSBs修复中起重要作用。综述了真核生物NHEJ途径中核心蛋白质Ku、DNA-PKcs、DNA连接酶IV、XRCC4、ARTEMIS和XIF等因子的结构和功能,并简要介绍了NHEJ修复途径的分子机制,其中涉及到DSBs位点蛋白复合体组装的两种模型。 展开更多
关键词 DNA双链断裂(dsbs) 非同源重组连接 KU蛋白
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BRCA1与DSB修复路径取向 被引量:4
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作者 吴晓丹 刘江琴 李莉萍 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2015年第1期28-33,共6页
乳腺癌易感基因1(BRCA1)是一个肿瘤抑制基因.BRCA1参与DNA末端切除、细胞周期调控以及染色体修饰等来维护基因组的稳定性.有研究表明,它能够促进正确的DNA双链断裂(DSBs)修复,如同源重组修复(HDR)和经典的非同源末端连接(C-NHEJ);而抑... 乳腺癌易感基因1(BRCA1)是一个肿瘤抑制基因.BRCA1参与DNA末端切除、细胞周期调控以及染色体修饰等来维护基因组的稳定性.有研究表明,它能够促进正确的DNA双链断裂(DSBs)修复,如同源重组修复(HDR)和经典的非同源末端连接(C-NHEJ);而抑制错误性的DSB修复,如单链退火修复(SSA)和非经典的末端连接(A-EJ);其机制是通过与某些DNA修复相关蛋白质的相互作用来引导DSB修复.目前,BRCA1在DSB修复通路中的作用机制尚未完全明确,仍有待进一步的研究.本文主要阐述BRCA1在DSB各修复通路中是如何发挥其引导作用的. 展开更多
关键词 乳腺癌易感基因1 DNA双链断裂 同源重组 非同源末端连接
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DETECTION OF STRAND BREAKS OF DNA IN HUMAN EARLY CHORIONIC VILLUS CELLS INDUCED BY DIAGNOSTIC ULTRASOUND USING ^(32)P-LABELED ALU HYBRIDIZATION
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作者 王彩凤 李旭 张蕴璟 《Journal of Pharmaceutical Analysis》 SCIE CAS 2006年第1期57-60,共4页
Objective To explore if strand breaks of DNA in human early chorionic villus cells in uterus were induced by diagnostic ultrasound and to evaluate the method used for detection of single-stranded breaks and double-str... Objective To explore if strand breaks of DNA in human early chorionic villus cells in uterus were induced by diagnostic ultrasound and to evaluate the method used for detection of single-stranded breaks and double-stranded breaks in human DNA. Methods 60 normal pregnant women aged 20-30, who underwent artificial abortion during 6-8 weeks of gestation, were randomly divided into 2 experimental groups: All 30 cases were exposed to diagnostic ultrasound in uterus for 10 minutes, and 24 hours later chorionic villi were extracted; the other 30 cases were taken as the control group. Single-stranded DNA and double-stranded DNA in villus cells in all cases were isolated by the alkaline unwinding combined with hydroxylapatite chromatography, and were quantitatively detected using 32 P-labeled Alu probe for dot-blotting hybridization. Results There was no significant difference in quantity and percentage in single-stranded DNA and double-stranded DNA between 2 groups (P>0.05). 32 P-Alu probe could only hybridize with human DNA, and could detect DNA isolated from as few as 2.5×10 3 chorionic villus cells and 0.45ng DNA in human leukocytes. Conclusion The results suggested that there were no DNA strand damages in human chorionic villus cells when the uterus was exposed to diagnostic ultrasound for 10 minutes. The method,^(32)P-Alu probe for dot-blotting hybridization, was even more specific, sensitive and accurate than conventional approaches. 展开更多
关键词 diagnostic ultrasound early pregnancy chorionic villus in uterus DNA single-stranded breaks(ssbs) double-stranded breaks(dsbs) ^(32)P-labeled Alu probe dot-blot hybridization
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The molecular control of meiotic double-strand break (DSB) formation and its significance in human infertility 被引量:2
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作者 Yang Li Yu-Fan Wu +5 位作者 Han-Wei Jiang Ranjha Khan Qi-Qi Han Furhan Iqbal Xiao-Hua Jiang Qing-Hua Shi 《Asian Journal of Andrology》 SCIE CAS CSCD 2021年第6期555-561,共7页
Meiosis is an essential step in gametogenesis which is the key process in sexually reproducing organisms as meiotic aberrations may result in infertility. In meiosis, programmed DNA double-strand break (DSB) formation... Meiosis is an essential step in gametogenesis which is the key process in sexually reproducing organisms as meiotic aberrations may result in infertility. In meiosis, programmed DNA double-strand break (DSB) formation is one of the fundamental processes that are essential for maintaining homolog interactions and correcting segregation of chromosomes. Although the number and distribution of meiotic DSBs are tightly regulated, still abnormalities in DSB formation are known to cause meiotic arrest and infertility. This review is a detailed account of molecular bases of meiotic DSB formation, its evolutionary conservation, and variations in different species. We further reviewed the mutations of DSB formation genes in association with human infertility and also proposed the future directions and strategies about the study of meiotic DSB formation. 展开更多
关键词 DNA double-strand break(dsb) INFERTILITY MEIOSIS MUTATION
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Ataxia-telangiectasia mutated plays an important role in cerebellar integrity and functionality
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作者 Yulia Mitiagin Ari Barzilai 《Neural Regeneration Research》 SCIE CAS CSCD 2023年第3期497-502,共6页
Accumulating evidence indicates that ataxia-telangiectasia mutated kinase is critical for maintaining cellular homeostasis and that it has both nuclear and cytoplasmic functions.However,the functions of ataxia-telangi... Accumulating evidence indicates that ataxia-telangiectasia mutated kinase is critical for maintaining cellular homeostasis and that it has both nuclear and cytoplasmic functions.However,the functions of ataxia-telangiectasia mutated that when lost lead to cerebellar degeneration are still unknown.In this review,we first describe the role of ataxia-telangiectasia mutated in cerebellar pathology.In addition to its canonical nuclear functions in DNA damage response circuits,ataxia-telangiectasia mutated functions in various cytoplasmic and mitochondrial processes that are critically important for cellular homeostasis.We discuss these functions with a focus on the role of ataxia-telangiectasia mutated in maintaining the homeostatic redox state.Finally,we describe the unique functions of ataxia-telangiectasia mutated in various types of neuronal and glial cells including cerebellar granule neurons,astrocytes,and microglial cells. 展开更多
关键词 ataxia telangiectasia ATM CEREBELLUM DNA damage response double-strand breaks mitochondrial dysfunction oxidative stress single-strand breaks
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基于机器学习方法对人类基因组DNA双链断裂位点进行识别
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作者 董碧宇 刘国庆 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2023年第8期1153-1167,共15页
DNA双链断裂(double-strand break,DSB)是细胞中一种严重的DNA损伤形式,与包括癌症、重组异常、神经元发育异常在内的多种基因组不稳定性疾病密切相关。由于成本和技术门槛的限制,高通量测序技术绘制的高分辨率DSB图谱十分有限,这阻碍... DNA双链断裂(double-strand break,DSB)是细胞中一种严重的DNA损伤形式,与包括癌症、重组异常、神经元发育异常在内的多种基因组不稳定性疾病密切相关。由于成本和技术门槛的限制,高通量测序技术绘制的高分辨率DSB图谱十分有限,这阻碍了我们对不同物种基因组中DSB情况的认知。据此,我们建立了以随机森林(RF)、支持向量机(SVM)和逻辑回归(LR)三种分类器为基础算法的分类预测模型,对人类上皮细胞基因组DSB位点进行预测。除了之前预测研究中常用到的表观特征和DNA形状特征外,我们发现DNA序列特征(k-mer频数、GC含量、GC-偏移和互信息)也能表征DSB位点。同时,在考虑DNA物理性质、化学位移和自相关信息后,预测结果得到有效提高。将上述所有特征合并后进行预测,得到了较好的分类预测结果,其中逻辑回归(LR)的分类预测性能是最佳(AUC=0.97),与以往的预测结果相当(AUC=0.964)。另外,通过特征递增搜索方法,得到由294个特征组成的最优特征集,对应的AUC值达到0.974。 展开更多
关键词 双链断裂 分类预测 化学位移 DNA物理性质 自相关
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CpG-ODN对重离子辐射所致脾脏损伤的救治作用
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作者 张超 傅华 +2 位作者 易永华 蔡建明 高福 《辐射研究与辐射工艺学报》 CAS CSCD 2023年第4期43-50,共8页
本次研究主要探讨CpG-ODN对重离子辐射所致脾脏损伤的救治作用。实验中C57BL/6L小鼠受到5 Gy12C6+离子全身照射,在照射后急性期计算小鼠脾脏指数,苏木精-伊红(Hematoxylin-Eosin staining,HE)染色观察脾脏组织结构变化。另外,免疫组化... 本次研究主要探讨CpG-ODN对重离子辐射所致脾脏损伤的救治作用。实验中C57BL/6L小鼠受到5 Gy12C6+离子全身照射,在照射后急性期计算小鼠脾脏指数,苏木精-伊红(Hematoxylin-Eosin staining,HE)染色观察脾脏组织结构变化。另外,免疫组化法检测γ-H2AX蛋白含量以判断脾脏细胞DNA发生双链断裂(Double-strand break,DSB)情况,末端脱氧核苷酸转移酶介导的dUTP缺口末端标(Terminal deoxynucleotidyl transferase-mediatedd UTPnickandlabeling,TUNEL)法检测脾脏细胞凋亡水平,荧光标记法检测外周血CD19+B细胞数量。结果显示,经12C6+离子照射后CpG-ODN处理,小鼠脾脏指数提高,脾脏红髓萎缩程度减轻,白髓面积增大,其内淋巴B细胞排列密度提高,发生DSB和凋亡的细胞数量减少,外周血CD19+B细胞数量增加。这些表明CpG-ODN能减轻12C6+离子照射后脾脏损伤,其原因可能与CpG-ODN抑制细胞发生DSB和凋亡有关。 展开更多
关键词 碳离子辐射 CPG-ODN 脾脏 凋亡 双链断裂
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Telomeric DNA breaks in human induced pluripotent stem cells trigger ATR-mediated arrest and telomerase-independent telomere damage repair
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作者 Katrina N.Estep John W.Tobias +2 位作者 Rafael J.Fernandez Brinley M.Beveridge F.Brad Johnson 《Journal of Molecular Cell Biology》 SCIE CAS CSCD 2024年第3期46-60,共15页
Although mechanisms of telomere protection are well-defined in differentiated cells,how stem cells sense and respond to telomere dysfunction,in particular telomeric double-strand breaks(DSBs),is poorly characterized.H... Although mechanisms of telomere protection are well-defined in differentiated cells,how stem cells sense and respond to telomere dysfunction,in particular telomeric double-strand breaks(DSBs),is poorly characterized.Here,we report the DNA damage signaling,cell cycle,and transcriptome changes in human induced pluripotent stem cells(iPSCs)in response to telomere-internal DSBs.We engineer human iPSCs with an inducible TRF1-FokI fusion protein to acutely induce DSBs at telomeres.Using this model,we demonstrate that TRF1-FokI DSBs activate an ATR-dependent DNA damage response,which leads to p53-independent cell cycle arrest in G2.Using CRISPR–Cas9 to cripple the catalytic domain of telomerase reverse transcriptase,we show that telomerase is largely dispensable for survival and lengthening of TRF1-FokI-cleaved telomeres,which instead are effectively repaired by robust homologous recombination(HR).In contrast to HR-based telomere maintenance in mouse embryonic stem cells,where HR causes ZSCAN4-dependent extension of telomeres beyond their initial lengths,HR-based repair of telomeric breaks is sufficient to maintain iPSC telomeres at a normal length,which is compatible with sustained survival of the cells over several days of TRF1-FokI induction.Our findings suggest a previously unappreciated role for HR in telomere maintenance in telomerase-positive iPSCs and reveal distinct iPSC-specific responses to targeted telomeric DNA damage. 展开更多
关键词 TELOMERES TELOMERASE alternative lengthening of telomeres pluripotent stem cells DNA damage double-strand breaks
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与细胞周期G_2/M期进程相关的H2AX磷酸化 被引量:7
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作者 涂文志 尚增甫 +5 位作者 李兵 刘晓丹 王豫 徐勤枝 让蔚清 周平坤 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2012年第4期339-345,共7页
γH2AX焦点(foci)被普遍当做DNA双链断裂(DSB)损伤的分子标志物.为探讨细胞周期进程相关的H2AX磷酸化规律特征,采用胸腺嘧啶双阻滞结合噻氨酯哒唑(nocodazole)的后续处理,将HeLa细胞同步于有丝分裂的前中期.然后,用流式细胞仪检测细胞... γH2AX焦点(foci)被普遍当做DNA双链断裂(DSB)损伤的分子标志物.为探讨细胞周期进程相关的H2AX磷酸化规律特征,采用胸腺嘧啶双阻滞结合噻氨酯哒唑(nocodazole)的后续处理,将HeLa细胞同步于有丝分裂的前中期.然后,用流式细胞仪检测细胞周期、Western印迹和免疫荧光法,观察γH2AX表达和γH2AX焦点的形成.结果显示,细胞进入G2/M期和有丝分裂过程中,γH2AX水平显著增加;在无DNA DSB发生的情况下,部分M期细胞中也存在大量的γH2AX焦点.随着细胞完成有丝分裂从M期退出再进入G1期,γH2AX的表达水平逐渐降低.这种γH2AX表达变化特征与G2/M期密切关联的PLK1和Cyclin B1的表达规律相类似.在4 Gy大剂量照射下,HeLa细胞于照后8到12 h出现明显的G2/M期阻滞.γH2AX焦点数在照后1 h达高峰,随后降低,照后8 h又上升,出现了第2个峰值.与之不同的是,在1 Gy低剂量照射下,细胞的G2/M期阻滞微弱,γH2AX焦点数在照后0.5 h最高,随后下降,且无反弹,符合DNA DSB的修复动力学特征.因此,将γH2AX当做DNA DSB分子标志物时,还需要考虑细胞周期变化的影响.γH2AX适合作为1 Gy以下照射的DNA双链断裂损伤的分子标志. 展开更多
关键词 γH2AX 细胞周期 G2/M阻滞 DNA双链断裂 分子标志物
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中性彗星分析法检测肿瘤细胞的放射敏感性 被引量:5
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作者 张玉晶 闫洁 +2 位作者 高远红 李艳春 杨伟志 《中国肿瘤》 CAS 2004年第11期731-734,共4页
[目的]研究中性彗星分析法检测肿瘤细胞内在放射敏感性的可靠性和影响因素。[方法]人鼻咽高分化鳞癌细胞株CNE鄄1和人纤维肉瘤细胞株HT1080细胞,用6MVX线以0、100、200、300、400、600、800、1000cGy等不同剂量点照射,克隆形成法制定存... [目的]研究中性彗星分析法检测肿瘤细胞内在放射敏感性的可靠性和影响因素。[方法]人鼻咽高分化鳞癌细胞株CNE鄄1和人纤维肉瘤细胞株HT1080细胞,用6MVX线以0、100、200、300、400、600、800、1000cGy等不同剂量点照射,克隆形成法制定存活曲线,比较其放射敏感性的差异。然后进行两种细胞于600cGy照射后1、2、4、8h的中性彗星分析,以尾力矩为指标,动态检测不同时间点残留的DNA双链断裂,并与克隆形成分析结果相比较。[结果]克隆形成分析法显示CNE鄄1细胞的放射敏感性低于HT1080细胞,其2Gy照射后存活分数(SF2)和平均致死剂量D0值分别为0.397、0.331和1.898、1.287。两种细胞在照射后1、2、4h的中性彗星尾力矩分别为0.148±0.106、0.100±0.083、0.058±0.043和0.297±0.179、0.157±0.092、0.092±0.060,各时间点之间有显著性差异(P<0.05),但差别逐渐减小;照射后2h和4h的尾力矩比值分别为0.637和0.630,与SF2比值和D0比值的倒数(0.834和0.678)较接近;两种细胞照射后8h的尾力矩比较差异无显著性。[结论]中性彗星分析法与克隆形成分析法的检测结果有确切的相关性,照射后一定时间内的残留DNA双链断裂有可能成为检测肿瘤细胞放射敏感性的指标。 展开更多
关键词 彗星分析法 双链断裂 放射敏感性 放射疗法 肿瘤
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DNA-PKcs在鼻咽癌组织中的表达及其临床意义 被引量:3
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作者 严珊珊 刘莉 +3 位作者 刘志刚 曾木圣 宋立兵 夏云飞 《癌症》 SCIE CAS CSCD 北大核心 2008年第9期979-983,共5页
背景与目的:DNA双链断裂(DNA double-strand break,DSB)是射线杀灭肿瘤细胞的主要机制,而同源重组(homologous recombination,HR)和非同源性末端连接(DNA nonhomologous end-joining,NHEJ)是DSB的两条重要修复途径。DNA-PK催化亚单位(ca... 背景与目的:DNA双链断裂(DNA double-strand break,DSB)是射线杀灭肿瘤细胞的主要机制,而同源重组(homologous recombination,HR)和非同源性末端连接(DNA nonhomologous end-joining,NHEJ)是DSB的两条重要修复途径。DNA-PK催化亚单位(catalytic subunit of DNA-dependent protein kinase,DNA-PKcs)是NHEJ途径的主要修复蛋白之一,在DSB中发挥着重要作用。本研究旨在通过检测鼻咽癌组织中DNA-PKcs的表达情况,探讨其与鼻咽癌临床病理特征及预后的关系。方法:采用免疫组化SP法检测223例鼻咽癌患者组织中DNA-PKcs的表达,并结合患者的临床及预后资料进行分析。结果:223例鼻咽癌患者中,DNA-PKcs的过表达率为36.8%。卡方检验显示,DNA-PKcs表达强弱与患者的性别、年龄、病理分型及N分期的相关性均无统计学意义(P>0.05),与TNM分期、T分期、M分期均有关(P<0.05)。单因素生存分析显示,DNA-PKcs过表达患者5年总生存率低于低表达患者(54.6%vs.79.4%),差异有统计学意义(P<0.05)。多因素Cox回归模型分析显示T、N、M分期及DNA-PKcs表达水平是影响鼻咽癌患者预后的独立因素(P<0.05)。结论:DNA-PKcs在大部分鼻咽癌组织中均有表达,DNA-PKcs的表达水平与鼻咽癌患者预后相关,对患者的预后判断有一定的指导意义。 展开更多
关键词 鼻咽肿瘤 DNA—PKcs DNA双链断裂 免疫组织化学 预后
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恒场电泳检测DNA双链断裂及其应用 被引量:3
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作者 李雨 郑秀龙 +4 位作者 罗成基 蔡建明 孟祥顺 吴玮 高建国 《辐射研究与辐射工艺学报》 CAS CSCD 北大核心 1998年第4期234-237,共4页
应用普通恒场琼脂糖凝胶电泳检测受γ射线照射后小鼠胸腺细胞DNA双链断裂(dsb)。在一定条件下,该法可以获得与脉冲凝胶电泳相似的结果。用此法观察了离体照射小鼠胸腺细胞DNAdsb修复作用,发现该法可以检测到DNA“梯... 应用普通恒场琼脂糖凝胶电泳检测受γ射线照射后小鼠胸腺细胞DNA双链断裂(dsb)。在一定条件下,该法可以获得与脉冲凝胶电泳相似的结果。用此法观察了离体照射小鼠胸腺细胞DNAdsb修复作用,发现该法可以检测到DNA“梯状”带,可做为一种研究细胞凋亡的新方法。 展开更多
关键词 恒场 电泳 Γ射线照射 DNA双链断裂 dsb
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细胞坏死和凋亡(Apoptosis)DNA状态的比较 被引量:5
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作者 牛建昭 魏育林 曹炜 《解剖学报》 CAS CSCD 北大核心 1995年第2期142-145,共4页
用琼脂糖凝胶电泳法、非放射性缺口翻译标记法(nicktranslation,NT)和末端脱氧核苷酸转移酶(terminaldeoxynucleotidyltransferase,TdT)标记法研究细胞凋亡(apopt... 用琼脂糖凝胶电泳法、非放射性缺口翻译标记法(nicktranslation,NT)和末端脱氧核苷酸转移酶(terminaldeoxynucleotidyltransferase,TdT)标记法研究细胞凋亡(apoptosis)和坏死时细胞总DNA的DNA断裂(DNAstrandbreaks,DSB)状态。细胞凋亡标本取自皮下注射氢化可的松(10mg/100g体重)的大鼠胸腺;坏死标本采用CCl_4(100μ1/100g体重)的大鼠肝脏。结果表明:经激素处理的胸腺组织DNA在琼脂糖凝胶电泳呈现清晰、规则的“梯子”状(ladder)带纹,而CCl_4处理后的肝脏组织DNA则呈现不规则的带纹。缺口翻译标记时,凋亡和坏死组织的DNA显色无差别,但TdT末端标记时,坏死组织的DNA显色较凋亡组织的DNA显色速度快,着色深。以上结果提示:1.细胞凋亡和坏死时均存在DSB,但DSB类型不同。2.凋亡时DNA降解成寡聚核小体而出现规则的“ladder”,坏死时DNA降解成长短不等的片段。3.TdT末端标记法显示,细胞凋亡DSB显色特性不同于坏死。 展开更多
关键词 细胞凋亡 细胞坏死 缺口翻译标记 DNA断裂 大鼠
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DNA双链断裂损伤反应及它的医学意义 被引量:7
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作者 宋宜 孙志贤 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2007年第9期929-934,共6页
DNA损伤应激反应是维持基因组稳定性的基石.细胞在长期进化中形成了由损伤监视、周期调控、损伤修复、凋亡诱导等在内的自稳平衡机制.一方面,借助感应、识别并启动精细而复杂的修复机制修复损伤;另一方面,通过DNA损伤应激活化的细胞周... DNA损伤应激反应是维持基因组稳定性的基石.细胞在长期进化中形成了由损伤监视、周期调控、损伤修复、凋亡诱导等在内的自稳平衡机制.一方面,借助感应、识别并启动精细而复杂的修复机制修复损伤;另一方面,通过DNA损伤应激活化的细胞周期检查点机制,延迟或阻断细胞周期进程,为损伤修复提供时间,使细胞能安全进入新一轮细胞周期;损伤无法修复时则诱导细胞凋亡.DNA双链断裂(double strand breaks,DSBs)是真核基因组后果最严重的损伤类型之一,其修复不利,同肿瘤等人类疾病的发生发展密切相关.新进展揭示:DSBs损伤反应信号分子ATM-Chk2-p53、H2AX等的组成性活化,是肿瘤形成早期所激活的细胞内可诱导的抗癌屏障,其信号网络的精确、精细调控在基因组稳定性维持中发挥重要作用.此外,HIV病毒整合进入宿主细胞基因组的过程也依赖于宿主细胞中ATM介导的DSBs损伤反应信号转导;ATM特异性的小分子抑制剂在抗HIV感染中显示重要的功能意义.文中重点讨论调控DSBs损伤应激反应信号网络的主要研究进展,及其在肿瘤发生、发展及抗HIV感染中的新医学意义. 展开更多
关键词 DNA损伤反应 DNA双链断裂(dsbs) ATM P53 DNA损伤检查点
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