The objective of this study was to construct the infectious clone of encephalomyocarditis virus (EMCV) BJC3 strain.The genomic cDNA of the virus was amplified by three overlapping segments using RT-PCR,and cloned into...The objective of this study was to construct the infectious clone of encephalomyocarditis virus (EMCV) BJC3 strain.The genomic cDNA of the virus was amplified by three overlapping segments using RT-PCR,and cloned into low-copy plasmid pWSK29 to construct the full-length cDNA clone pWSKBJC3/ w.The pWSKBJC3/w was in vitro transcribed and transfected into BHK-21 cells to rescue the virus.The results showed that the full-length cDNA clone was infectious and the virus could be rescued in BHK-21 cells.The rescued virus designated RvBJC3W was identified by RT-PCR and indirect immunofluorescence assay(IFA).The rescued virus had similar growth characteristics to its parental virus BJC3 and retained pathogenicity for mice.Our results indicate that the first infectious cDNA clone of EMCV in China has been successfully established and provides an essential tool for investigating the molecular basis of pathogenicity of EMCV.展开更多
Encephalomyocarditis virus(EMCV)is a positive single-stranded small RNA virus without envelope,which can infect a variety of mammals.Swines are the most susceptible animals,which can cause acute myocarditis and respir...Encephalomyocarditis virus(EMCV)is a positive single-stranded small RNA virus without envelope,which can infect a variety of mammals.Swines are the most susceptible animals,which can cause acute myocarditis and respiratory failure in piglets and reproductive failure in pregnant sows.Diseases caused by EMCV have a wide range of effects on the global swine industry.In this study,a strain of EMCV was isolated from a swine aborted fetus in northeast China.It was identified by reverse transcriptase polymerase chain reaction(RT-PCR),electron microscopic observation and indirect immunofluorescence assay.The subsequent results showed that the virus titer of HLJ strain grew to 8.3 lgTCID50 on baby hamster kidney 21(BHK-21)cells.And HLJ strain caused the specific cytopathic effect(CPE)on BHK-21 cells and severe pathological changes in mice.Complete genome sequencing and multiple sequence alignment showed that the homology between HLJ strain and other isolates worldwide was 71.5%-99.7%.Phylogenetic analysis showed that EMCV isolates fell into five clusters:lineageⅠ,Ⅱ,Ⅲ,ⅣandⅤ,based on the nucleotide sequences of the entire open reading frame(ORF)and VP1 gene.HLJ isolate was grouped into lineage I.The analyses of amino acid mutation sites of VP1 protein showed that the amino acids at positions 20 and 54 in VP1 junction were unique to HLJ strain.The isolation of HLJ strain enriched the epidemiological database of EMCV.展开更多
目的:建立一种干扰素诱导跨膜蛋白2(IFITM2)基因SYBR Green I实时荧光定量PCR检测方法,以期为IFITM2基因的动态监测提供有效的检测技术.方法:根据GenBank中公布的IFITM2基因序列设计特异性引物,以质粒pMD18-T-IFITM2为模板进行条件优化...目的:建立一种干扰素诱导跨膜蛋白2(IFITM2)基因SYBR Green I实时荧光定量PCR检测方法,以期为IFITM2基因的动态监测提供有效的检测技术.方法:根据GenBank中公布的IFITM2基因序列设计特异性引物,以质粒pMD18-T-IFITM2为模板进行条件优化,绘制标准曲线,建立IFITM2基因SYBR Green I实时荧光定量PCR检测方法,并对建立的方法进行条件优化与评价,用建立的方法对脑心肌炎病毒感染后细胞中IFITM2基因转录水平进行检测.结果:建立的20μL检测体系中IFITM2基因最佳引物浓度为10μM,最佳退火温度为59℃;标准质粒在2.62×105~2.62×1010 copies/μL浓度范围内与Ct值呈良好线性关系,线性方程y=-3.495 log x+43.12,R 2=0.998,且灵敏性、特异性和重复性均较高.应用建立的方法对EMCV感染细胞中IFITM2基因转录水平进行检测,结果显示,在感染早期IFITM2转录水平不变,感染后期转录水平逐渐升高.EMCV感染引起宿主IFITM2基因转录水平的变化,可能与EMCV逃逸宿主相关免疫应答有关.结论:成功建立了一种快速、准确检测IFITM2基因的SYBR Green I实时荧光定量PCR方法.该方法的建立,为进一步研究IFITM2在EMCV感染过程中的作用奠定了基础.展开更多
基金supported by the Key Project of National Natural Science Foundation of China(30530550)
文摘The objective of this study was to construct the infectious clone of encephalomyocarditis virus (EMCV) BJC3 strain.The genomic cDNA of the virus was amplified by three overlapping segments using RT-PCR,and cloned into low-copy plasmid pWSK29 to construct the full-length cDNA clone pWSKBJC3/ w.The pWSKBJC3/w was in vitro transcribed and transfected into BHK-21 cells to rescue the virus.The results showed that the full-length cDNA clone was infectious and the virus could be rescued in BHK-21 cells.The rescued virus designated RvBJC3W was identified by RT-PCR and indirect immunofluorescence assay(IFA).The rescued virus had similar growth characteristics to its parental virus BJC3 and retained pathogenicity for mice.Our results indicate that the first infectious cDNA clone of EMCV in China has been successfully established and provides an essential tool for investigating the molecular basis of pathogenicity of EMCV.
基金Supported by the National Natural Science Foundation of China(31372438)。
文摘Encephalomyocarditis virus(EMCV)is a positive single-stranded small RNA virus without envelope,which can infect a variety of mammals.Swines are the most susceptible animals,which can cause acute myocarditis and respiratory failure in piglets and reproductive failure in pregnant sows.Diseases caused by EMCV have a wide range of effects on the global swine industry.In this study,a strain of EMCV was isolated from a swine aborted fetus in northeast China.It was identified by reverse transcriptase polymerase chain reaction(RT-PCR),electron microscopic observation and indirect immunofluorescence assay.The subsequent results showed that the virus titer of HLJ strain grew to 8.3 lgTCID50 on baby hamster kidney 21(BHK-21)cells.And HLJ strain caused the specific cytopathic effect(CPE)on BHK-21 cells and severe pathological changes in mice.Complete genome sequencing and multiple sequence alignment showed that the homology between HLJ strain and other isolates worldwide was 71.5%-99.7%.Phylogenetic analysis showed that EMCV isolates fell into five clusters:lineageⅠ,Ⅱ,Ⅲ,ⅣandⅤ,based on the nucleotide sequences of the entire open reading frame(ORF)and VP1 gene.HLJ isolate was grouped into lineage I.The analyses of amino acid mutation sites of VP1 protein showed that the amino acids at positions 20 and 54 in VP1 junction were unique to HLJ strain.The isolation of HLJ strain enriched the epidemiological database of EMCV.
文摘目的:建立一种干扰素诱导跨膜蛋白2(IFITM2)基因SYBR Green I实时荧光定量PCR检测方法,以期为IFITM2基因的动态监测提供有效的检测技术.方法:根据GenBank中公布的IFITM2基因序列设计特异性引物,以质粒pMD18-T-IFITM2为模板进行条件优化,绘制标准曲线,建立IFITM2基因SYBR Green I实时荧光定量PCR检测方法,并对建立的方法进行条件优化与评价,用建立的方法对脑心肌炎病毒感染后细胞中IFITM2基因转录水平进行检测.结果:建立的20μL检测体系中IFITM2基因最佳引物浓度为10μM,最佳退火温度为59℃;标准质粒在2.62×105~2.62×1010 copies/μL浓度范围内与Ct值呈良好线性关系,线性方程y=-3.495 log x+43.12,R 2=0.998,且灵敏性、特异性和重复性均较高.应用建立的方法对EMCV感染细胞中IFITM2基因转录水平进行检测,结果显示,在感染早期IFITM2转录水平不变,感染后期转录水平逐渐升高.EMCV感染引起宿主IFITM2基因转录水平的变化,可能与EMCV逃逸宿主相关免疫应答有关.结论:成功建立了一种快速、准确检测IFITM2基因的SYBR Green I实时荧光定量PCR方法.该方法的建立,为进一步研究IFITM2在EMCV感染过程中的作用奠定了基础.
文摘【目的】利用网络药理学和分子对接技术发现莪术醇抗脑心肌炎病毒(Encephalomyocarditis virus,EMCV)的作用靶点及机制。【方法】利用PharmMapper、GeneCards数据库获得莪术醇抗EMCV的相关靶点;通过Cytoscape 3.7.2软件、STRING和DAVID数据库构建靶蛋白互作(PPI)网络并筛选关键靶点,对靶点进行GO功能和KEGG通路富集分析,并构建莪术醇抗EMCV靶点-通路网络;通过AutoDock Vina 1.1.2分析莪术醇与靶蛋白的结合能及结合模式。【结果】网络药理学分析结果显示,莪术醇抗EMCV的潜在靶点有9个,其中丝裂原活化激酶14(mitogen-activated protein kinase 14,MAPK14)、信号转导与转录激活因子1(signal transducer and activator of transcription 1,STAT1)、白蛋白(albumin,ALB)、白细胞介素2(interleukin 2,IL2)可能是莪术醇抗EMCV的核心靶点,所得靶点参与C型凝集素受体信号通路、神经营养素信号通路和JAK-STAT信号通路等代谢通路,功能涉及调节炎症反应细胞因子的产生、蛋白激酶活性和药物结合等;分子对接结果显示,4种核心靶蛋白与莪术醇之间存在较强的结合能,均存在疏水形式的结合,其中ALB、STAT1和IL2与莪术醇之间还存在氢键结合。【结论】本研究结果表明,MAPK14、STAT1、ALB和IL2是莪术醇发挥抗EMCV作用的潜在靶点,本研究为莪术醇作为抗EMCV药物的研发提供理论依据和线索。
