The origin of the catalytic power of enzymes with a meta-stable native state,e.g.molten globular state,is an unsolved challenging issue in biochemistry.To help understand the possible differences between this special ...The origin of the catalytic power of enzymes with a meta-stable native state,e.g.molten globular state,is an unsolved challenging issue in biochemistry.To help understand the possible differences between this special class of enzymes and the typical ones,we report here computer simulations of the catalysis of both the well-folded wild-type and the molten globular mutant of chorismate mutase.Using the ab initio quantum mechanical/molecular mechanical minimum free-energy path method,we determined the height of reaction barriers that are in good agreement with experimental measurements.Enzyme-substrate interactions were analyzed in detail to identify factors contributing to catalysis.Computed angular order parameters of backbone N–H bonds and side-chain methyl groups suggested site-specific,non-uniform rigidity changes of the enzymes during catalysis.The change of conformational entropy from the ground state to the transition state revealed distinctly contrasting entropy/enthalpy compensations in the dimeric wild-type enzyme and its molten globular monomeric variant.A unique catalytic strategy was suggested for enzymes that are natively molten globules:some may possess large conformational flexibility to provide strong electrostatic interactions to stabilize the transition state of the substrate and compensate for the entropy loss in the transition state.The equilibrium conformational dynamics in the reactant state were analyzed to quantify their contributions to the structural transitions enzymes needed to reach the transition states.The results suggest that large-scale conformational dynamics make important catalytic contributions to sampling conformational regions in favor of binding the transition state of substrate.展开更多
A novel cardanol sulfonate Gemini surfactant with high surface properties was synthesized by cashew phenol, 1,3-dibromopropane and chlorosulfonic acid through three steps procedure of etherification, sulfonation and n...A novel cardanol sulfonate Gemini surfactant with high surface properties was synthesized by cashew phenol, 1,3-dibromopropane and chlorosulfonic acid through three steps procedure of etherification, sulfonation and neutralization. A surface tension method was employed to investigate the thermo-dynamic properties of micellization in aqueous solution for cardanol sulfonate Gemini surfactant synthesized in laboratory. As a result, the micellization of cardanol sulfonate Gemini surfactant in aqueous solutions is spontaneous and entropy-driven. The micellization process is enthalpy-entropy compensated with the compensation temperature (Tc) of 308 ± 1 K.展开更多
The validity of the compensation between the enthalpies and entropies obtained from the calorimetric methods was statistically examined for the first time based on computer simulations. It turned out that several clai...The validity of the compensation between the enthalpies and entropies obtained from the calorimetric methods was statistically examined for the first time based on computer simulations. It turned out that several claimed enthalpy-entropy compensations in literature based upon the calorimetric measurements were statistically correct. Interestingly, a linear relationship between the slopes and correlation coefficients of the T DeltaS-DeltaH plots of different physical origin of the compensation behavior.展开更多
Based on thermoelectrochemical equation for an electrode reaction, the entropy change of it can be obtained by the thermoelectrochemical technology(TECT). The entropy changes of Fe(CN)-36/Fe(CN)-46,H+/H2(P0), Cu+2/Cu...Based on thermoelectrochemical equation for an electrode reaction, the entropy change of it can be obtained by the thermoelectrochemical technology(TECT). The entropy changes of Fe(CN)-36/Fe(CN)-46,H+/H2(P0), Cu+2/Cu and Zn+2/Zn electrode reaction systems and the dilute enthalpies of the H+, Cu2+ and Zn2+ ions under the ion concentrations studied have been determined by a specially designed thermoelectrochemical equipment. The enthalpy change and entropy change for the five systems at unlimitedly diluted concentrations agree well with the literature.展开更多
The vapor pressures of n-butyl carbamate were measured in the temperature range from 372.37 K to 479.27 K and fitted with Antoine equation. The compressibility factor of the vapor was calculated with the Virial equati...The vapor pressures of n-butyl carbamate were measured in the temperature range from 372.37 K to 479.27 K and fitted with Antoine equation. The compressibility factor of the vapor was calculated with the Virial equation and the second virial coefficient was determined by the Vetere model. Then the standard enthalpy of vaporization for n-butyl carbamate was estimated. The heat capacity was measured for the solid state(299.39–324.2 K) and liquid state(336.65–453.21 K) by means of adiabatic calorimeter. The standard enthalpy of formation ΔfH[crystal(cr),298.15 K] and standard entropy S(crystal,298.15 K) of the substance were calculated on the basis of the gas-phase standard enthalpy of formation ΔfH(g,298.15 K)and gas-phase standard entropy S(g,298.15 K), which were estimated by the Benson method. The results are acceptable, validated by a thermochemical cycle.展开更多
In this paper,based on the feature of high resolution one-dimensional range profile,two effective motion compensation methods are presented. Firstly,the processing method of stepped-frequency and the response of targe...In this paper,based on the feature of high resolution one-dimensional range profile,two effective motion compensation methods are presented. Firstly,the processing method of stepped-frequency and the response of target moving to range profile are analyzed. Secondly,the function of range profile entropy and range profile contrast are presented for velocity compensation,and then the theory analysis,math model,and solution method are analyzed in detail. Finally,several simulation experiments are designed to prove the accuracy and effectiveness of these two methods. From the final theory analysis and simulation experiments,the conclusion can be drawn that these two methods are effective,which can get much higher velocity estimation accuracy,well real-time and easy to be used in project application. After motion compens-ation,the high resolution one-dimensional range profile will be much better than that used to be,and is used for the detection, recognition and ranging of moving targets.展开更多
Various soft materials share some common features, such as significant entropic effect, large fluctuations, sensitivity to thermodynamic conditions, and mesoscopic characteristic spatial and temporal scales. However, ...Various soft materials share some common features, such as significant entropic effect, large fluctuations, sensitivity to thermodynamic conditions, and mesoscopic characteristic spatial and temporal scales. However, no quantitative defini- tions have yet been provided for soft matter, and the intrinsic mechanisms leading to their common features are unclear. In this work, from the viewpoint of statistical mechanics, we show that soft matter works in the vicinity of a specific thermo- dynamic state named moderate point, at which entropy and enthalpy contributions among substates along a certain order parameter are well balanced or have a minimal difference. Around the moderate point, the order parameter fluctuation, the associated response function, and the spatial correlation length maximize, which explains the large fluctuation, the sensitivity to thermodynamic conditions, and mesoscopic spatial and temporal scales of soft matter, respectively. Possible applications to switching chemical bonds or allosteric biomachines determining their best working temperatures are also briefly discussed.展开更多
The molar entropy(OS)and molar enthalpy(△H)for the denaturation event that triggers cutaneous erythema was determined to be △S=190J/(mole K)and△H=146.9×10^(3) J/mole.The experiment involved placing heated wate...The molar entropy(OS)and molar enthalpy(△H)for the denaturation event that triggers cutaneous erythema was determined to be △S=190J/(mole K)and△H=146.9×10^(3) J/mole.The experiment involved placing heated water against the skin of the forearm,for a range of termperatures and exposure times.Exposing the skin to 45℃ for 22 s was at the threshold for producing erythema,which was similar to the threshold for a slight degree of pain.展开更多
Formation condition of high-entropy alloys with solid solution structure was investigated. Seventeen kinds of the high-entropy alloys with different components were prepared, the influencing factors (the comprehensiv...Formation condition of high-entropy alloys with solid solution structure was investigated. Seventeen kinds of the high-entropy alloys with different components were prepared, the influencing factors (the comprehensive atomic radius difference δ, the mixing enthalpy AH and the mixing entropy AS) of phase composition of the alloys were calculated, and the microstructure and phase compositions of alloys were analyzed by using SEM and XRD. The result shows that only the systems with δ≤2.77 and △H≥-8.8 kJ/mol will form high entropy alloy with simple solid solution. Otherwise, intermetallic compounds will exist in the alloys. So, selection of the type of element has important effects on microstructure and properties of high entropy alloys.展开更多
ISO 20765-1:2005“Natural gas-Calculation of thermodynamic properties-Part 1:Gas phase properties for transmission and distribution applications”(GB/T 30491.1-2014《天然气热力学性质计算第1部分:输配气中的气相性质》)是...ISO 20765-1:2005“Natural gas-Calculation of thermodynamic properties-Part 1:Gas phase properties for transmission and distribution applications”(GB/T 30491.1-2014《天然气热力学性质计算第1部分:输配气中的气相性质》)是以AGA8方程为基础计算管输天然气热力学性质,根据亥姆霍兹自由能及其关于温度和密度的导出函数来求解,推导严格。但是,标准中的计算公式仍然有些复杂,不容易理解,并且没有明确给出理想气体焓、熵的计算公式;经过研究,利用ISO 20765-1(GB/T 30491.1)中的数据,提出了6个计算理想气体焓、熵的新公式。新公式经过严格的数学推导,是带有双曲函数和指数函数的多项式,使用简单,精确度高,其相对误差平均值小于3×10^(-5)。展开更多
Enthalpy-entropy compensation was found to be a universal law in protein unfolding based on over 3 000 experimental data. Water molecular reorganization accompanying the protein unfolding was suggested as the origin-o...Enthalpy-entropy compensation was found to be a universal law in protein unfolding based on over 3 000 experimental data. Water molecular reorganization accompanying the protein unfolding was suggested as the origin-of the enthalpy-entropy compensation in protein unfolding. It is indicated that the enthalpy-entropy compensation constitutes the physical foundation that satisfies the biological need of the small free energy changes in protein unfolding, without the sacrifice of the bio-diversity of proteins. The enthalpy-entropy compensation theory proposed herein also provides valuable insights into the Privalov’s puzzle of enthalpy and entropy convergence in protein unfolding.展开更多
基金support from HKU seed funding for basic research and Hong Kong General Research Fund is greatly appreciatedThe high-perfor-mance computing facility at the University of Hong Kong provided computing resources for this work
文摘The origin of the catalytic power of enzymes with a meta-stable native state,e.g.molten globular state,is an unsolved challenging issue in biochemistry.To help understand the possible differences between this special class of enzymes and the typical ones,we report here computer simulations of the catalysis of both the well-folded wild-type and the molten globular mutant of chorismate mutase.Using the ab initio quantum mechanical/molecular mechanical minimum free-energy path method,we determined the height of reaction barriers that are in good agreement with experimental measurements.Enzyme-substrate interactions were analyzed in detail to identify factors contributing to catalysis.Computed angular order parameters of backbone N–H bonds and side-chain methyl groups suggested site-specific,non-uniform rigidity changes of the enzymes during catalysis.The change of conformational entropy from the ground state to the transition state revealed distinctly contrasting entropy/enthalpy compensations in the dimeric wild-type enzyme and its molten globular monomeric variant.A unique catalytic strategy was suggested for enzymes that are natively molten globules:some may possess large conformational flexibility to provide strong electrostatic interactions to stabilize the transition state of the substrate and compensate for the entropy loss in the transition state.The equilibrium conformational dynamics in the reactant state were analyzed to quantify their contributions to the structural transitions enzymes needed to reach the transition states.The results suggest that large-scale conformational dynamics make important catalytic contributions to sampling conformational regions in favor of binding the transition state of substrate.
文摘A novel cardanol sulfonate Gemini surfactant with high surface properties was synthesized by cashew phenol, 1,3-dibromopropane and chlorosulfonic acid through three steps procedure of etherification, sulfonation and neutralization. A surface tension method was employed to investigate the thermo-dynamic properties of micellization in aqueous solution for cardanol sulfonate Gemini surfactant synthesized in laboratory. As a result, the micellization of cardanol sulfonate Gemini surfactant in aqueous solutions is spontaneous and entropy-driven. The micellization process is enthalpy-entropy compensated with the compensation temperature (Tc) of 308 ± 1 K.
基金the NSFC. Insights from Prof. E. Grunwald of Brandeis University and from Prof. W. Linert of Technical University of Vienna are
文摘The validity of the compensation between the enthalpies and entropies obtained from the calorimetric methods was statistically examined for the first time based on computer simulations. It turned out that several claimed enthalpy-entropy compensations in literature based upon the calorimetric measurements were statistically correct. Interestingly, a linear relationship between the slopes and correlation coefficients of the T DeltaS-DeltaH plots of different physical origin of the compensation behavior.
文摘Based on thermoelectrochemical equation for an electrode reaction, the entropy change of it can be obtained by the thermoelectrochemical technology(TECT). The entropy changes of Fe(CN)-36/Fe(CN)-46,H+/H2(P0), Cu+2/Cu and Zn+2/Zn electrode reaction systems and the dilute enthalpies of the H+, Cu2+ and Zn2+ ions under the ion concentrations studied have been determined by a specially designed thermoelectrochemical equipment. The enthalpy change and entropy change for the five systems at unlimitedly diluted concentrations agree well with the literature.
文摘The vapor pressures of n-butyl carbamate were measured in the temperature range from 372.37 K to 479.27 K and fitted with Antoine equation. The compressibility factor of the vapor was calculated with the Virial equation and the second virial coefficient was determined by the Vetere model. Then the standard enthalpy of vaporization for n-butyl carbamate was estimated. The heat capacity was measured for the solid state(299.39–324.2 K) and liquid state(336.65–453.21 K) by means of adiabatic calorimeter. The standard enthalpy of formation ΔfH[crystal(cr),298.15 K] and standard entropy S(crystal,298.15 K) of the substance were calculated on the basis of the gas-phase standard enthalpy of formation ΔfH(g,298.15 K)and gas-phase standard entropy S(g,298.15 K), which were estimated by the Benson method. The results are acceptable, validated by a thermochemical cycle.
基金Sponsored by the National Nature Science Foundation of China(Grant No.61201237)the Nature Science Foundation of Heilongjiang Province of China(Grant No.QC2012C069)the Fundamental Research Funds for the Central Universities(Grant No.HEUCFZ1129,HEUCF130810,HEUCF130817)
文摘In this paper,based on the feature of high resolution one-dimensional range profile,two effective motion compensation methods are presented. Firstly,the processing method of stepped-frequency and the response of target moving to range profile are analyzed. Secondly,the function of range profile entropy and range profile contrast are presented for velocity compensation,and then the theory analysis,math model,and solution method are analyzed in detail. Finally,several simulation experiments are designed to prove the accuracy and effectiveness of these two methods. From the final theory analysis and simulation experiments,the conclusion can be drawn that these two methods are effective,which can get much higher velocity estimation accuracy,well real-time and easy to be used in project application. After motion compens-ation,the high resolution one-dimensional range profile will be much better than that used to be,and is used for the detection, recognition and ranging of moving targets.
基金Project supported by the National Basic Research Program of China(Grant No.2013CB932804)the National Natural Science Foundation of China(Grant Nos.11274319 and 11421063)
文摘Various soft materials share some common features, such as significant entropic effect, large fluctuations, sensitivity to thermodynamic conditions, and mesoscopic characteristic spatial and temporal scales. However, no quantitative defini- tions have yet been provided for soft matter, and the intrinsic mechanisms leading to their common features are unclear. In this work, from the viewpoint of statistical mechanics, we show that soft matter works in the vicinity of a specific thermo- dynamic state named moderate point, at which entropy and enthalpy contributions among substates along a certain order parameter are well balanced or have a minimal difference. Around the moderate point, the order parameter fluctuation, the associated response function, and the spatial correlation length maximize, which explains the large fluctuation, the sensitivity to thermodynamic conditions, and mesoscopic spatial and temporal scales of soft matter, respectively. Possible applications to switching chemical bonds or allosteric biomachines determining their best working temperatures are also briefly discussed.
文摘The molar entropy(OS)and molar enthalpy(△H)for the denaturation event that triggers cutaneous erythema was determined to be △S=190J/(mole K)and△H=146.9×10^(3) J/mole.The experiment involved placing heated water against the skin of the forearm,for a range of termperatures and exposure times.Exposing the skin to 45℃ for 22 s was at the threshold for producing erythema,which was similar to the threshold for a slight degree of pain.
基金Project(HIT.NSRIF.2009090) supported by Natural Scientific Research Innovation Foundation in Harbin Institute of Technology,China
文摘Formation condition of high-entropy alloys with solid solution structure was investigated. Seventeen kinds of the high-entropy alloys with different components were prepared, the influencing factors (the comprehensive atomic radius difference δ, the mixing enthalpy AH and the mixing entropy AS) of phase composition of the alloys were calculated, and the microstructure and phase compositions of alloys were analyzed by using SEM and XRD. The result shows that only the systems with δ≤2.77 and △H≥-8.8 kJ/mol will form high entropy alloy with simple solid solution. Otherwise, intermetallic compounds will exist in the alloys. So, selection of the type of element has important effects on microstructure and properties of high entropy alloys.
文摘ISO 20765-1:2005“Natural gas-Calculation of thermodynamic properties-Part 1:Gas phase properties for transmission and distribution applications”(GB/T 30491.1-2014《天然气热力学性质计算第1部分:输配气中的气相性质》)是以AGA8方程为基础计算管输天然气热力学性质,根据亥姆霍兹自由能及其关于温度和密度的导出函数来求解,推导严格。但是,标准中的计算公式仍然有些复杂,不容易理解,并且没有明确给出理想气体焓、熵的计算公式;经过研究,利用ISO 20765-1(GB/T 30491.1)中的数据,提出了6个计算理想气体焓、熵的新公式。新公式经过严格的数学推导,是带有双曲函数和指数函数的多项式,使用简单,精确度高,其相对误差平均值小于3×10^(-5)。
文摘Enthalpy-entropy compensation was found to be a universal law in protein unfolding based on over 3 000 experimental data. Water molecular reorganization accompanying the protein unfolding was suggested as the origin-of the enthalpy-entropy compensation in protein unfolding. It is indicated that the enthalpy-entropy compensation constitutes the physical foundation that satisfies the biological need of the small free energy changes in protein unfolding, without the sacrifice of the bio-diversity of proteins. The enthalpy-entropy compensation theory proposed herein also provides valuable insights into the Privalov’s puzzle of enthalpy and entropy convergence in protein unfolding.