The study was conducted to isolate and determine the antibiotic resistance in Escherichia coli and Klebsiella pneumonia from urine samples over a 2-year period (August 2013-September 2015) at the La Paz Medical Center...The study was conducted to isolate and determine the antibiotic resistance in Escherichia coli and Klebsiella pneumonia from urine samples over a 2-year period (August 2013-September 2015) at the La Paz Medical Center, Malabo. A retrospective analysis of 785 urine culture samples over a 2-year period August 2013-September 2015 was carried out according to the routine protocol of urinalysis. Bacterial etiological agents were isolated from 155 (19.7%) samples with highest prevalence of Escherichia coli (55.5%) followed by Klebsiella pneumonia (23.2%), Proteus mirabilis (4.5%), Pseudomonas species (3.2%), Enterobacter species (2.6%), Enterococcus faecalis (2.6%) and others species (8.4%). The E. coli and K. pneumonia represent 78.7% of all isolated bacterial strains. The E. coli and K. pneumoniae isolates possess highly resistant to ampicillin, Trimethoprim/Sulfamethoxazole, Doxycycline, Amoxicicline/Clavulanic acid. Whereas K. pneumonia demonstrated also to be highly resistant to Gentamycin, Cefuroxime and Ceftriaxon, low level of resistance to Piperacilin/Tazobactam, Amikacin and the lowest to Imipenem. The alarming level of MDR strains to the first choice antibiotics treatment was observed.展开更多
Introduction: Escherichia coli and Klebsiella are Gram-negative bacilli of Enterobacteriaceae and are components of the colonic microbiota of animals and humans. The virulent strains cause gastroenteritis and urinary ...Introduction: Escherichia coli and Klebsiella are Gram-negative bacilli of Enterobacteriaceae and are components of the colonic microbiota of animals and humans. The virulent strains cause gastroenteritis and urinary tract infections (UTI), and the incidence of the infections increases due to the increase of multidrug-resistant strains. The aim of this study is to determine the antibiotics resistance profile of E. coli and Klebsiella. Methodology: A total of 100 isolates of E. coli and Klebsiella were isolated from three sources, healthy stools and patient stools with gastroenteritis and urine subjects with UTI, during the period from November 2021 to January 2022. An antimicrobial susceptibility test was conducted with 14 antibiotics using the disc-Kirby-Bauer’s diffusion method. Results: Both E. coli and Klebsiella had variable abilities to resist the studied antimicrobial drugs, including 14 antibiotics belonging to nine different classes that have different patterns or mechanisms in stopping the growth or killing of microorganisms. All bacterial isolates revealed highly significant antimicrobial resistance almost for all antibiotics except carbapenems. About 72% of total isolates were multidrug-resistant (MDR), because they appeared resistant to at least three classes of antibiotics. Only two E. coli isolates out of 24 isolates (8.3%) were recovered from healthy stool samples and 6.25% of E. coli isolates (2 isolates out of 32) which were obtained from urine samples were sensitive to all antibiotics. The highest rates of antibiotic resistance were observed in E. coli than in Klebsiella. Both species had resistance to Amoxicillin-clavulanate (70.58%), Cefotaxime (58.96%), and Ceftazidime (57.81%). While the lowest frequency was meropenem (4.86%), and all strains were sensitive to imipenem (100%). Conclusion: These results partly explain the high prevalence of antibiotic resistance observed in Iraq due to drug misuse. Most of the bacterial strains were multidrug-resistant, and they spread more in pathogenic strains than in commensal strains.展开更多
In this study, the prevalence of Extended Spectrum Beta-lactamase (ESBL) producing Klebsiella pneumoniae and Escherichia coli isolates from the University of Abuja Teaching Hospital and the National Hospital was deter...In this study, the prevalence of Extended Spectrum Beta-lactamase (ESBL) producing Klebsiella pneumoniae and Escherichia coli isolates from the University of Abuja Teaching Hospital and the National Hospital was determined. A total of two hundred and fifteen (215) clinical isolates were examined, of which 60% were E. coli and 40% K. pneumoniae respectively. The isolates were collected from various samples namely: Stool, Urine, Pus, High Vagina Swab, Sputum and Wound swab. Out of these isolates, 54 of K. pneumoniae were screened to be ESBL negative and 32 as ESBL positive isolates, while 88 and 40 E. coli were also screened as ESBL negative and ESBL positive isolates respectively. These represent 37.9% of all K. pneumoniae isolates and 31.25% of E. coli isolates respectively. The prevalence of ESBL among the species was not however statistically different (p > 0.05). Multiple resistance in these isolates was common and there is the need for routine screening of ESBL in our hospitals to guide rational and effective use of antibiotics.展开更多
Extended-spectrum β-lactamases (ESBLs) are the main cause of resistance to the third and forth-generation cephalosporins in Enterobacteriaceae, which are mediated by plasmids and can hydrolyze oxyiminoaminothiazoly...Extended-spectrum β-lactamases (ESBLs) are the main cause of resistance to the third and forth-generation cephalosporins in Enterobacteriaceae, which are mediated by plasmids and can hydrolyze oxyiminoaminothiazolyl cephalosporins and monobactams. Most of ESBLs are mutants of the classical TEM and SHV types, with one or more amino-acid substitution(s) in the active site.展开更多
Background Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia (E.) coil has been reported in China since 2008.However,there is no information about the molecular epidemiology of KPC-producing E.coil i...Background Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia (E.) coil has been reported in China since 2008.However,there is no information about the molecular epidemiology of KPC-producing E.coil in China.In this study,we aimed to investigate the sequence type (ST) and characteristics of KPC-producing E.coil isolates in China.Methods Three carbapenem-resistant isolates of E.coil (E1,E2,and E3) from one teaching hospital in Hangzhou covering a one year period were analyzed.Antibiotic susceptibility was determined by Etest.Pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) were used for epidemiological analysis.The genetic structure around blaKPC,the major plasmid incompatibility typing,and the identification of 3-lactamase gene types were performed by PCR and the positive products were subsequently sequenced.Plasmids were analyzed by transformation,restriction,and Southern blotting.Results PFGE demonstrated that patterns of isolates E1 and E2 were clonally-related and designated as patterns A1 and A2; pattern of isolate E3 was different and designated as pattern B.MLST analysis showed that the three isolates displayed one common sequence type ST131.The identification of bla gene types by PCR and sequencing showed that blaKPC-2,blaCTX-M-14,and blaTEM-1 were detected in all three isolates.All three isolates carried a KPC-2-encoding plasmid of the IncN replicon.Plasmid analysis and hybridization experiments showed that the isolates were found simultaneously to carry two or four plasmids.The blaKPc-2 gene in E1 and E2 was located in a plasmid with size of ca.50 kb.However,the blaKPC-2 gene in E3 was located in a plasmid with size of ca.130 kb.Conclusions E.coil ST131 with KPC-2 β-1actamase has emerged in China,which enlarges the geographical area where the ST131 KPC-oroducing E.coil strains have diffused.展开更多
Background: Extended-spectrum β-lactamase (ESBL)-producing Escherichia coli (E. coli) and Klebsiella pneumoniae (K. pneumoniae) are the important pathogens causing pneumonia. This study aimed to investigate the clini...Background: Extended-spectrum β-lactamase (ESBL)-producing Escherichia coli (E. coli) and Klebsiella pneumoniae (K. pneumoniae) are the important pathogens causing pneumonia. This study aimed to investigate the clinical characteristics and molecular epidemiology of ESBL-producing E. coli and K. pneumoniae causing pneumonia at a large teaching hospital in China. Methods: We collected patient's clinical data and ESBL-producing E. coli and K. pneumoniae strains causing pneumonia (from December 2015 to June 2016) at a hospital in Wuhan. The susceptibilities, multi-locus sequence typing, homologous analysis, ESBL genes by polymerase chain reaction and sequencing were determined. Results: A total of 59 ESBL-producing strains (31 E. coli and 28 K. pneumoniae) isolated from patients with pneumonia were analyzed. The majority of strains were isolated from patients were with hospital-acquired pneumonia (37/59, 62.7%), followed by community-acquired pneumonia (13/59, 22.0%), and ventilator-related pneumonia (9/59, 15.3%). The E. coli ST131 (9 isolates, 29.0%) and K. pneumoniae ST11 (5 isolates, 17.9%) were the predominant sub-types. The most prevalent ESBL gene was CTX-M-14, followed by SHV-77, CTX-M-3, SHV-11, and CTX-M-27. At least 33 (55.9%) of the ESBL-producing strains carried two or more ESBL genes. The ISEcp1 and IS26 were found upstream of all blaCTX-M (CTX-Ms) and of most blaSHV (SHVs)(57.6%), respectively. Moreover, three ESBL-producing K. pneumoniae ST11 strains which were resistant to carbapenems carried the blaNDM-1 and blaKPC-2, two of which also bearing blaOXA-48 were resistant to all antibiotics (including Tigecycline). Conclusions: Hospital-acquired pneumonia is more likely correlated with ESBL-producing E. coli and K. pneumoniae. ESBL-producing E. coli ST131 and multi-drug resistance ESBL-producing, as well as New Delhi metallo-β-lactamase-1 (NDM-1) and Klebsiella pneumoniae carbapenemases-2 (KPC-2) bearing K. pneumoniae ST11 are spreading in patients with pneumonia in hospital.展开更多
Humanity is facing an enormous and growing worldwide threat from the emergence of multi-drug-resistant(MDR)Gram-negative bacteria such as Escherichia coli,Klebsiella pneumoniae,and Acinetobacter baumannii.Polymyxin B ...Humanity is facing an enormous and growing worldwide threat from the emergence of multi-drug-resistant(MDR)Gram-negative bacteria such as Escherichia coli,Klebsiella pneumoniae,and Acinetobacter baumannii.Polymyxin B and E(colistin)constitute the last-line therapies for treating MDR Gram-negative bacteria.Polymyxin is a cationic antibacterial peptide that can destroy the outer membrane of Gram-negative bacteria.With the increasing clinical application of polymyxin,however,there have been many reports of the occurrence of polymyxin-resistant Gram-negative bacteria.This resistance is mainly mediated by the modification or complete loss of lipopolysaccharide(LPS).LPS is also a virulence factor of Gram-negative bacteria,and alterations of LPS may correlate with virulence.Although it is generally believed that the biological costs associated with drug resistance may enable benign susceptible bacteria to overcome resistant bacteria when antibiotic pressure is reduced,some studies have shown that polymyxin-resistant bacteria are associated with higher virulence and greater fitness compared with their susceptible counterparts.To predict the development of polymyxin resis-tance and evaluate interventions for its mitigation,it is important to understand the relative biological cost of polymyxin resistance compared with susceptibility.The impact of polymyxin resistance mecha-nisms on the virulence and fitness of these three Gram-negative bacteria are summarized in this review.展开更多
AIM: To study the antibiotic susceptibility patterns of gram-negative healthcare associated bacterial infections at two tertiary hospitals in the Sanandaj city, Kurdistan Province, Iran.METHODS: From January 2012 to D...AIM: To study the antibiotic susceptibility patterns of gram-negative healthcare associated bacterial infections at two tertiary hospitals in the Sanandaj city, Kurdistan Province, Iran.METHODS: From January 2012 to December 2012, all positive cultures from potentially sterile body fluids were gathered. They sent to professor Alborzi clinical microbiology center in Shiraz for further analysis and susceptibility testing. The antibiotic susceptibility was determined using the Kirby-Bauer method(disk diffusiontechnique). The Results were interpreted according to Clinical and Laboratory Standards Institute guidelines against a series of antimicrobials. World Health Organization definitions for Healthcare associated infections were followed.RESULTS: Seven hundred and thirty-two positive cultures were reported from both hospitals. Seventynine isolates/patients fulfilled the study criteria for healthcare associated gram-negative infections. The most frequent bacterial cultures were from the pediatric wards(52%). Serratia marcescens(S. marcescens)(38%) Escherichia coli(E. coli)(19%), Klebsiella pneumoniae(K. pneumoniae)(19%), Acinetobacter baumannii(6%), Enterobacter species(6%), Serratia odorifera(4%) and Pseudomonas species(5%) were the most frequently isolated organisms. The susceptibility pattern of common isolates i.e., S. marcescens, E. coli and K. pneumoniae for commonly used antibiotics were as follows: Ampicillin 3.3%, 6.7%, 20%; gentamicin 73.3%, 73.3%, 46.7%; ceftazidim 80%, 73.3%, 33.3%; cefepim 80%, 86.7%, 46.7%; piperacillin/tazobactam 90%, 66.7%, 86.7%; ciprofloxacin 100%, 73.3%, 86.7%; imipenem 100%, 100%, 100%, respectively. CONCLUSION: The most effective antibiotics against gram-negative healthcare associated infections are imipenem followed by ciprofloxacin. The resistance rate is high against ampicillin and cephalothin. The high mortality rate(46.1%) associated with S. marcescens is alarming.展开更多
Background OXA-232-producing Klebsiella pneumoniae was first identified in China in 2016,and its clonal transmission was reported in 2019.However,there are no prevalence and genotypic surveillance data available for O...Background OXA-232-producing Klebsiella pneumoniae was first identified in China in 2016,and its clonal transmission was reported in 2019.However,there are no prevalence and genotypic surveillance data available for OXA-232 in China.Therefore,we investigated the trends and characteristics of OXA-232 type carbapenemase in Zhejiang Province,China from 2018 to 2021.Methods A total of 3278 samples from 1666 patients in the intensive care units were collected from hospitals in Zhejiang Province from 2018 to 2021.Carbapenem-resistant isolates were initially selected by China Blue agar plates supplemented with 0.3μg/ml meropenem,and further analyzed by matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry identification,immune colloidal gold technique,conjugation experiment,antimicrobial susceptibility testing and whole genome sequencing.Results A total of 79 OXA-producing strains were recovered,with the prevalence increased from 1.8%[95%confidence interval(CI):0.7–3.7%]in 2018 to 6.0%(95%CI:4.4–7.9%)in 2021.Seventy-eight strains produced OXA-232 and one produced OXA-181.The blaOXA-232 gene in all strains was located in a 6141-bp ColKP3-type non-conjugative plasmid and the blaOXA-181 gene was located in a 51,391-bp ColKP3/IncX3-type non-conjugative plasmid.The blaOXA-232-producing K.pneumoniae was dominated(75/76)by isolates of sequence type 15(ST15)that differed by less than 80 SNPs.All OXA-producing strains(100%,95%CI:95.4–100.0%)were multidrug-resistant.Conclusions From 2018 to 2021,OXA-232 is the most prevalent OXA-48-like derivative in Zhejiang Province,and ST15 K.pneumoniae isolates belonging to the same clone are the major carriers.The transmission of ColKP3-type plasmid to E.coli highlighted that understanding the transmission mechanism is of great importance to delay or arrest the propagation of OXA-232 to other species.展开更多
Background:Murrah buffalo is a breed of water buffalo(Bubalus bubalis)reared for milk and meat,especially in Northern India.There are so many studies on the antimicrobial potential of the cow(Bos indicus)urine but buf...Background:Murrah buffalo is a breed of water buffalo(Bubalus bubalis)reared for milk and meat,especially in Northern India.There are so many studies on the antimicrobial potential of the cow(Bos indicus)urine but buffalo urine has rarely been studied.This study was aimed to evaluate the antimicrobial activity in whole buffalo urine and its distillate.Methods:Urine specimens were collected from seven Murrah buffalo heifers in the morning over three days from all seven heifers and distillated to prepare urine distillate(UD).The antimicrobial activity was determined through 96 well microplate method diluting(1:1)urine and UD in Mueller Hinton liquid medium against 919 microbial strains belonging to 148 species of 49 genera(Candia,11 genera of Gram+ve bacteria,37 genera of Gram-ve bacteria).The test strains were taken from the repository,revived and tested for purity before testing.The test strains were of clinical origin(372),environmental origin(496)and also from reference strain repositories(51).Results:Of the 919 test strains,a total of 57.89%and 56.04%of the tested strains were susceptible to UD and urine,respectively.There was a no significant(p>0.4)difference in the antimicrobial activity of UD and urine against 919 strains of microbes,regardless of their genus,species,and Gram staining reaction.Similarly,there was no significant(p>0.4)difference between the susceptibility of bacterial and Candida strains to UD or urine.However,strains of clinical origin were more often resistant to buffalo UD and urine(p<0.01)than strains isolated from environmental sources irrespective of their Gram staining characteristics(p>0.05).A significantly(p<0.01)higher proportion of reference strains was susceptible to UD and urine than microbial strains of clinical and environmental origin.For buffalo urine and UD,the most susceptible strains were Stenotrophomonas maltophilia(13/13)followed by Citrobacter freundii(8/10);Salmonella enterica ssp.enterica(21/27),Geobacillus stearothermophilus(23/30),Staphylococcus aureus(13/17),and Paenibacillus larvae(7/10)strains.The most resistant strains belonged to Acinetobacter calcoaceticus(15/20)species followed by strains of Paenibacillus alvei(11/16),Edwardsiella tarda(20/30),Bacillus megaterium(7/11)and Escherichia coli(59/110)species.There was insignificant(p,>0.05)difference in susceptibility of strains of different species of the same genus;however,among all the Bacillus species strains of B.coagulans were the most susceptible(66.7%)and strains of B.megaterium were the least susceptible(36.4%),similarly Enterococcus faecium strains were more susceptible(68.2%)than strains of Enterococcus faecalis(38.9%),70%strains of P.larvae were susceptible to urine and UD but only 31.3%of strains of P.alvei were susceptible.Strains of Klebsiella pneumoniae and Raoultella terrigena,earlier belonging to the same genus Klebsiella,had comparable susceptibility to buffalo urine and UD.Conclusion:The study concluded that buffalo urine may be a potential antimicrobial and may be explored further for identification of active antimicrobial compounds in buffalo urine.展开更多
目的分析近7年大肠埃希菌及肺炎克雷伯菌耐药率与抗菌药物使用强度(antibiotics use density,AUD)的相关性,为临床合理使用抗菌药物提供参考。方法回顾性分析该院2016—2022年大肠埃希菌及肺炎克雷伯菌的耐药率与同期主要抗菌药物的AUD...目的分析近7年大肠埃希菌及肺炎克雷伯菌耐药率与抗菌药物使用强度(antibiotics use density,AUD)的相关性,为临床合理使用抗菌药物提供参考。方法回顾性分析该院2016—2022年大肠埃希菌及肺炎克雷伯菌的耐药率与同期主要抗菌药物的AUD,采用Pearson相关性分析法分析两者的相关性。结果大肠埃希菌对对哌拉西林/他唑巴坦的耐药率与头孢呋辛的AUD呈正相关(P<0.05);对头孢吡肟的耐药率与头孢西丁、氨曲南的AUD呈正相关(P<0.01、P<0.05);对头孢西丁的耐药率与头孢西丁的AUD呈正相关(P<0.05);对亚胺培南的耐药率与头孢哌酮/舒巴坦、阿米卡星的AUD呈正相关(P<0.01)。肺炎克雷伯菌对阿莫西林/克拉维酸的耐药率与头孢西丁、氨曲南的AUD呈正相关(P<0.01);对哌拉西林/他唑巴坦的耐药率与头孢西丁的AUD呈正相关(P<0.05),对头孢噻肟的耐药率与阿莫西林/克拉维酸的AUD呈正相关(P<0.01);对头孢吡肟的耐药率与头孢西丁、左氧氟沙星的AUD呈正相关(P<0.05);对阿米卡星的耐药率与头孢他啶、头孢噻肟、亚胺培南的AUD呈正相关(P<0.01、P<0.05)。大肠埃希菌对哌拉西林/他唑巴坦的耐药率与头孢唑啉的AUD呈负相关(P<0.05);对头孢唑啉的耐药率与头孢他啶、头孢噻肟的AUD呈负相关(P<0.05);对头孢吡肟的耐药率与哌拉西林/他唑巴坦、头孢噻肟的AUD呈负相关(P<0.05);对头孢西丁的耐药率与头孢噻肟的AUD呈负相关(P<0.05);对亚胺培南的耐药率与阿莫西林/克拉维酸的AUD呈负相关(P<0.05)。肺炎克雷伯菌对阿莫西林/克拉维酸的耐药率与哌拉西林/他唑巴坦的AUD呈负相关(P<0.05);对头孢西丁的耐药率与哌拉西林/他唑巴坦的AUD呈负相关(P<0.05)。结论大肠埃希菌及肺炎克雷伯菌的耐药率与多种抗菌药物的AUD相关,应加强抗菌药物的合理管控,延缓细菌耐药的发生。展开更多
文摘The study was conducted to isolate and determine the antibiotic resistance in Escherichia coli and Klebsiella pneumonia from urine samples over a 2-year period (August 2013-September 2015) at the La Paz Medical Center, Malabo. A retrospective analysis of 785 urine culture samples over a 2-year period August 2013-September 2015 was carried out according to the routine protocol of urinalysis. Bacterial etiological agents were isolated from 155 (19.7%) samples with highest prevalence of Escherichia coli (55.5%) followed by Klebsiella pneumonia (23.2%), Proteus mirabilis (4.5%), Pseudomonas species (3.2%), Enterobacter species (2.6%), Enterococcus faecalis (2.6%) and others species (8.4%). The E. coli and K. pneumonia represent 78.7% of all isolated bacterial strains. The E. coli and K. pneumoniae isolates possess highly resistant to ampicillin, Trimethoprim/Sulfamethoxazole, Doxycycline, Amoxicicline/Clavulanic acid. Whereas K. pneumonia demonstrated also to be highly resistant to Gentamycin, Cefuroxime and Ceftriaxon, low level of resistance to Piperacilin/Tazobactam, Amikacin and the lowest to Imipenem. The alarming level of MDR strains to the first choice antibiotics treatment was observed.
文摘Introduction: Escherichia coli and Klebsiella are Gram-negative bacilli of Enterobacteriaceae and are components of the colonic microbiota of animals and humans. The virulent strains cause gastroenteritis and urinary tract infections (UTI), and the incidence of the infections increases due to the increase of multidrug-resistant strains. The aim of this study is to determine the antibiotics resistance profile of E. coli and Klebsiella. Methodology: A total of 100 isolates of E. coli and Klebsiella were isolated from three sources, healthy stools and patient stools with gastroenteritis and urine subjects with UTI, during the period from November 2021 to January 2022. An antimicrobial susceptibility test was conducted with 14 antibiotics using the disc-Kirby-Bauer’s diffusion method. Results: Both E. coli and Klebsiella had variable abilities to resist the studied antimicrobial drugs, including 14 antibiotics belonging to nine different classes that have different patterns or mechanisms in stopping the growth or killing of microorganisms. All bacterial isolates revealed highly significant antimicrobial resistance almost for all antibiotics except carbapenems. About 72% of total isolates were multidrug-resistant (MDR), because they appeared resistant to at least three classes of antibiotics. Only two E. coli isolates out of 24 isolates (8.3%) were recovered from healthy stool samples and 6.25% of E. coli isolates (2 isolates out of 32) which were obtained from urine samples were sensitive to all antibiotics. The highest rates of antibiotic resistance were observed in E. coli than in Klebsiella. Both species had resistance to Amoxicillin-clavulanate (70.58%), Cefotaxime (58.96%), and Ceftazidime (57.81%). While the lowest frequency was meropenem (4.86%), and all strains were sensitive to imipenem (100%). Conclusion: These results partly explain the high prevalence of antibiotic resistance observed in Iraq due to drug misuse. Most of the bacterial strains were multidrug-resistant, and they spread more in pathogenic strains than in commensal strains.
文摘In this study, the prevalence of Extended Spectrum Beta-lactamase (ESBL) producing Klebsiella pneumoniae and Escherichia coli isolates from the University of Abuja Teaching Hospital and the National Hospital was determined. A total of two hundred and fifteen (215) clinical isolates were examined, of which 60% were E. coli and 40% K. pneumoniae respectively. The isolates were collected from various samples namely: Stool, Urine, Pus, High Vagina Swab, Sputum and Wound swab. Out of these isolates, 54 of K. pneumoniae were screened to be ESBL negative and 32 as ESBL positive isolates, while 88 and 40 E. coli were also screened as ESBL negative and ESBL positive isolates respectively. These represent 37.9% of all K. pneumoniae isolates and 31.25% of E. coli isolates respectively. The prevalence of ESBL among the species was not however statistically different (p > 0.05). Multiple resistance in these isolates was common and there is the need for routine screening of ESBL in our hospitals to guide rational and effective use of antibiotics.
基金This work was supported by a grant from the National Natural Science Foundation of China (No. 30070903).
文摘Extended-spectrum β-lactamases (ESBLs) are the main cause of resistance to the third and forth-generation cephalosporins in Enterobacteriaceae, which are mediated by plasmids and can hydrolyze oxyiminoaminothiazolyl cephalosporins and monobactams. Most of ESBLs are mutants of the classical TEM and SHV types, with one or more amino-acid substitution(s) in the active site.
基金This study was supported by the grants from the National Natural Science Foundation of China (No.81171615) and the Natural Science Foundation of Zhejiang Province (No.Y2100355).
文摘Background Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia (E.) coil has been reported in China since 2008.However,there is no information about the molecular epidemiology of KPC-producing E.coil in China.In this study,we aimed to investigate the sequence type (ST) and characteristics of KPC-producing E.coil isolates in China.Methods Three carbapenem-resistant isolates of E.coil (E1,E2,and E3) from one teaching hospital in Hangzhou covering a one year period were analyzed.Antibiotic susceptibility was determined by Etest.Pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) were used for epidemiological analysis.The genetic structure around blaKPC,the major plasmid incompatibility typing,and the identification of 3-lactamase gene types were performed by PCR and the positive products were subsequently sequenced.Plasmids were analyzed by transformation,restriction,and Southern blotting.Results PFGE demonstrated that patterns of isolates E1 and E2 were clonally-related and designated as patterns A1 and A2; pattern of isolate E3 was different and designated as pattern B.MLST analysis showed that the three isolates displayed one common sequence type ST131.The identification of bla gene types by PCR and sequencing showed that blaKPC-2,blaCTX-M-14,and blaTEM-1 were detected in all three isolates.All three isolates carried a KPC-2-encoding plasmid of the IncN replicon.Plasmid analysis and hybridization experiments showed that the isolates were found simultaneously to carry two or four plasmids.The blaKPc-2 gene in E1 and E2 was located in a plasmid with size of ca.50 kb.However,the blaKPC-2 gene in E3 was located in a plasmid with size of ca.130 kb.Conclusions E.coil ST131 with KPC-2 β-1actamase has emerged in China,which enlarges the geographical area where the ST131 KPC-oroducing E.coil strains have diffused.
基金a grant from the National Natural Science Foundation of China (No.81500005).
文摘Background: Extended-spectrum β-lactamase (ESBL)-producing Escherichia coli (E. coli) and Klebsiella pneumoniae (K. pneumoniae) are the important pathogens causing pneumonia. This study aimed to investigate the clinical characteristics and molecular epidemiology of ESBL-producing E. coli and K. pneumoniae causing pneumonia at a large teaching hospital in China. Methods: We collected patient's clinical data and ESBL-producing E. coli and K. pneumoniae strains causing pneumonia (from December 2015 to June 2016) at a hospital in Wuhan. The susceptibilities, multi-locus sequence typing, homologous analysis, ESBL genes by polymerase chain reaction and sequencing were determined. Results: A total of 59 ESBL-producing strains (31 E. coli and 28 K. pneumoniae) isolated from patients with pneumonia were analyzed. The majority of strains were isolated from patients were with hospital-acquired pneumonia (37/59, 62.7%), followed by community-acquired pneumonia (13/59, 22.0%), and ventilator-related pneumonia (9/59, 15.3%). The E. coli ST131 (9 isolates, 29.0%) and K. pneumoniae ST11 (5 isolates, 17.9%) were the predominant sub-types. The most prevalent ESBL gene was CTX-M-14, followed by SHV-77, CTX-M-3, SHV-11, and CTX-M-27. At least 33 (55.9%) of the ESBL-producing strains carried two or more ESBL genes. The ISEcp1 and IS26 were found upstream of all blaCTX-M (CTX-Ms) and of most blaSHV (SHVs)(57.6%), respectively. Moreover, three ESBL-producing K. pneumoniae ST11 strains which were resistant to carbapenems carried the blaNDM-1 and blaKPC-2, two of which also bearing blaOXA-48 were resistant to all antibiotics (including Tigecycline). Conclusions: Hospital-acquired pneumonia is more likely correlated with ESBL-producing E. coli and K. pneumoniae. ESBL-producing E. coli ST131 and multi-drug resistance ESBL-producing, as well as New Delhi metallo-β-lactamase-1 (NDM-1) and Klebsiella pneumoniae carbapenemases-2 (KPC-2) bearing K. pneumoniae ST11 are spreading in patients with pneumonia in hospital.
基金supported by the National Key Research and Development Program of China (2017YFC1600100 and2017YFC1200203)the National Natural Science Foundation of China (81702040)the National Science Foundation of Zhejiang Province,China (LY20H190002)
文摘Humanity is facing an enormous and growing worldwide threat from the emergence of multi-drug-resistant(MDR)Gram-negative bacteria such as Escherichia coli,Klebsiella pneumoniae,and Acinetobacter baumannii.Polymyxin B and E(colistin)constitute the last-line therapies for treating MDR Gram-negative bacteria.Polymyxin is a cationic antibacterial peptide that can destroy the outer membrane of Gram-negative bacteria.With the increasing clinical application of polymyxin,however,there have been many reports of the occurrence of polymyxin-resistant Gram-negative bacteria.This resistance is mainly mediated by the modification or complete loss of lipopolysaccharide(LPS).LPS is also a virulence factor of Gram-negative bacteria,and alterations of LPS may correlate with virulence.Although it is generally believed that the biological costs associated with drug resistance may enable benign susceptible bacteria to overcome resistant bacteria when antibiotic pressure is reduced,some studies have shown that polymyxin-resistant bacteria are associated with higher virulence and greater fitness compared with their susceptible counterparts.To predict the development of polymyxin resis-tance and evaluate interventions for its mitigation,it is important to understand the relative biological cost of polymyxin resistance compared with susceptibility.The impact of polymyxin resistance mecha-nisms on the virulence and fitness of these three Gram-negative bacteria are summarized in this review.
基金Supported by Kurdistan University of Medical Sciences and Professor Alborzi Clinical Microbiology Research Center affiliated to Shiraz University of Medical Sciences supported the whole study
文摘AIM: To study the antibiotic susceptibility patterns of gram-negative healthcare associated bacterial infections at two tertiary hospitals in the Sanandaj city, Kurdistan Province, Iran.METHODS: From January 2012 to December 2012, all positive cultures from potentially sterile body fluids were gathered. They sent to professor Alborzi clinical microbiology center in Shiraz for further analysis and susceptibility testing. The antibiotic susceptibility was determined using the Kirby-Bauer method(disk diffusiontechnique). The Results were interpreted according to Clinical and Laboratory Standards Institute guidelines against a series of antimicrobials. World Health Organization definitions for Healthcare associated infections were followed.RESULTS: Seven hundred and thirty-two positive cultures were reported from both hospitals. Seventynine isolates/patients fulfilled the study criteria for healthcare associated gram-negative infections. The most frequent bacterial cultures were from the pediatric wards(52%). Serratia marcescens(S. marcescens)(38%) Escherichia coli(E. coli)(19%), Klebsiella pneumoniae(K. pneumoniae)(19%), Acinetobacter baumannii(6%), Enterobacter species(6%), Serratia odorifera(4%) and Pseudomonas species(5%) were the most frequently isolated organisms. The susceptibility pattern of common isolates i.e., S. marcescens, E. coli and K. pneumoniae for commonly used antibiotics were as follows: Ampicillin 3.3%, 6.7%, 20%; gentamicin 73.3%, 73.3%, 46.7%; ceftazidim 80%, 73.3%, 33.3%; cefepim 80%, 86.7%, 46.7%; piperacillin/tazobactam 90%, 66.7%, 86.7%; ciprofloxacin 100%, 73.3%, 86.7%; imipenem 100%, 100%, 100%, respectively. CONCLUSION: The most effective antibiotics against gram-negative healthcare associated infections are imipenem followed by ciprofloxacin. The resistance rate is high against ampicillin and cephalothin. The high mortality rate(46.1%) associated with S. marcescens is alarming.
文摘Background OXA-232-producing Klebsiella pneumoniae was first identified in China in 2016,and its clonal transmission was reported in 2019.However,there are no prevalence and genotypic surveillance data available for OXA-232 in China.Therefore,we investigated the trends and characteristics of OXA-232 type carbapenemase in Zhejiang Province,China from 2018 to 2021.Methods A total of 3278 samples from 1666 patients in the intensive care units were collected from hospitals in Zhejiang Province from 2018 to 2021.Carbapenem-resistant isolates were initially selected by China Blue agar plates supplemented with 0.3μg/ml meropenem,and further analyzed by matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry identification,immune colloidal gold technique,conjugation experiment,antimicrobial susceptibility testing and whole genome sequencing.Results A total of 79 OXA-producing strains were recovered,with the prevalence increased from 1.8%[95%confidence interval(CI):0.7–3.7%]in 2018 to 6.0%(95%CI:4.4–7.9%)in 2021.Seventy-eight strains produced OXA-232 and one produced OXA-181.The blaOXA-232 gene in all strains was located in a 6141-bp ColKP3-type non-conjugative plasmid and the blaOXA-181 gene was located in a 51,391-bp ColKP3/IncX3-type non-conjugative plasmid.The blaOXA-232-producing K.pneumoniae was dominated(75/76)by isolates of sequence type 15(ST15)that differed by less than 80 SNPs.All OXA-producing strains(100%,95%CI:95.4–100.0%)were multidrug-resistant.Conclusions From 2018 to 2021,OXA-232 is the most prevalent OXA-48-like derivative in Zhejiang Province,and ST15 K.pneumoniae isolates belonging to the same clone are the major carriers.The transmission of ColKP3-type plasmid to E.coli highlighted that understanding the transmission mechanism is of great importance to delay or arrest the propagation of OXA-232 to other species.
基金supported by grants received from CAAST-ACLH(No.NAHEP/CAAST/2018-19)of ICAR-World Bank-funded National Agricultural Higher Education Project(NAHEP).Peer revie。
文摘Background:Murrah buffalo is a breed of water buffalo(Bubalus bubalis)reared for milk and meat,especially in Northern India.There are so many studies on the antimicrobial potential of the cow(Bos indicus)urine but buffalo urine has rarely been studied.This study was aimed to evaluate the antimicrobial activity in whole buffalo urine and its distillate.Methods:Urine specimens were collected from seven Murrah buffalo heifers in the morning over three days from all seven heifers and distillated to prepare urine distillate(UD).The antimicrobial activity was determined through 96 well microplate method diluting(1:1)urine and UD in Mueller Hinton liquid medium against 919 microbial strains belonging to 148 species of 49 genera(Candia,11 genera of Gram+ve bacteria,37 genera of Gram-ve bacteria).The test strains were taken from the repository,revived and tested for purity before testing.The test strains were of clinical origin(372),environmental origin(496)and also from reference strain repositories(51).Results:Of the 919 test strains,a total of 57.89%and 56.04%of the tested strains were susceptible to UD and urine,respectively.There was a no significant(p>0.4)difference in the antimicrobial activity of UD and urine against 919 strains of microbes,regardless of their genus,species,and Gram staining reaction.Similarly,there was no significant(p>0.4)difference between the susceptibility of bacterial and Candida strains to UD or urine.However,strains of clinical origin were more often resistant to buffalo UD and urine(p<0.01)than strains isolated from environmental sources irrespective of their Gram staining characteristics(p>0.05).A significantly(p<0.01)higher proportion of reference strains was susceptible to UD and urine than microbial strains of clinical and environmental origin.For buffalo urine and UD,the most susceptible strains were Stenotrophomonas maltophilia(13/13)followed by Citrobacter freundii(8/10);Salmonella enterica ssp.enterica(21/27),Geobacillus stearothermophilus(23/30),Staphylococcus aureus(13/17),and Paenibacillus larvae(7/10)strains.The most resistant strains belonged to Acinetobacter calcoaceticus(15/20)species followed by strains of Paenibacillus alvei(11/16),Edwardsiella tarda(20/30),Bacillus megaterium(7/11)and Escherichia coli(59/110)species.There was insignificant(p,>0.05)difference in susceptibility of strains of different species of the same genus;however,among all the Bacillus species strains of B.coagulans were the most susceptible(66.7%)and strains of B.megaterium were the least susceptible(36.4%),similarly Enterococcus faecium strains were more susceptible(68.2%)than strains of Enterococcus faecalis(38.9%),70%strains of P.larvae were susceptible to urine and UD but only 31.3%of strains of P.alvei were susceptible.Strains of Klebsiella pneumoniae and Raoultella terrigena,earlier belonging to the same genus Klebsiella,had comparable susceptibility to buffalo urine and UD.Conclusion:The study concluded that buffalo urine may be a potential antimicrobial and may be explored further for identification of active antimicrobial compounds in buffalo urine.
文摘目的分析近7年大肠埃希菌及肺炎克雷伯菌耐药率与抗菌药物使用强度(antibiotics use density,AUD)的相关性,为临床合理使用抗菌药物提供参考。方法回顾性分析该院2016—2022年大肠埃希菌及肺炎克雷伯菌的耐药率与同期主要抗菌药物的AUD,采用Pearson相关性分析法分析两者的相关性。结果大肠埃希菌对对哌拉西林/他唑巴坦的耐药率与头孢呋辛的AUD呈正相关(P<0.05);对头孢吡肟的耐药率与头孢西丁、氨曲南的AUD呈正相关(P<0.01、P<0.05);对头孢西丁的耐药率与头孢西丁的AUD呈正相关(P<0.05);对亚胺培南的耐药率与头孢哌酮/舒巴坦、阿米卡星的AUD呈正相关(P<0.01)。肺炎克雷伯菌对阿莫西林/克拉维酸的耐药率与头孢西丁、氨曲南的AUD呈正相关(P<0.01);对哌拉西林/他唑巴坦的耐药率与头孢西丁的AUD呈正相关(P<0.05),对头孢噻肟的耐药率与阿莫西林/克拉维酸的AUD呈正相关(P<0.01);对头孢吡肟的耐药率与头孢西丁、左氧氟沙星的AUD呈正相关(P<0.05);对阿米卡星的耐药率与头孢他啶、头孢噻肟、亚胺培南的AUD呈正相关(P<0.01、P<0.05)。大肠埃希菌对哌拉西林/他唑巴坦的耐药率与头孢唑啉的AUD呈负相关(P<0.05);对头孢唑啉的耐药率与头孢他啶、头孢噻肟的AUD呈负相关(P<0.05);对头孢吡肟的耐药率与哌拉西林/他唑巴坦、头孢噻肟的AUD呈负相关(P<0.05);对头孢西丁的耐药率与头孢噻肟的AUD呈负相关(P<0.05);对亚胺培南的耐药率与阿莫西林/克拉维酸的AUD呈负相关(P<0.05)。肺炎克雷伯菌对阿莫西林/克拉维酸的耐药率与哌拉西林/他唑巴坦的AUD呈负相关(P<0.05);对头孢西丁的耐药率与哌拉西林/他唑巴坦的AUD呈负相关(P<0.05)。结论大肠埃希菌及肺炎克雷伯菌的耐药率与多种抗菌药物的AUD相关,应加强抗菌药物的合理管控,延缓细菌耐药的发生。