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Semi-Supervised Clustering Algorithm Based on Deep Feature Mapping
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作者 Xiong Xu Chun Zhou +2 位作者 Chenggang Wang Xiaoyan Zhang Hua Meng 《Intelligent Automation & Soft Computing》 SCIE 2023年第7期815-831,共17页
Clustering analysis is one of the main concerns in data mining.A common approach to the clustering process is to bring together points that are close to each other and separate points that are away from each other.The... Clustering analysis is one of the main concerns in data mining.A common approach to the clustering process is to bring together points that are close to each other and separate points that are away from each other.Therefore,measuring the distance between sample points is crucial to the effectiveness of clustering.Filtering features by label information and mea-suring the distance between samples by these features is a common supervised learning method to reconstruct distance metric.However,in many application scenarios,it is very expensive to obtain a large number of labeled samples.In this paper,to solve the clustering problem in the few supervised sample and high data dimensionality scenarios,a novel semi-supervised clustering algorithm is proposed by designing an improved prototype network that attempts to reconstruct the distance metric in the sample space with a small amount of pairwise supervised information,such as Must-Link and Cannot-Link,and then cluster the data in the new metric space.The core idea is to make the similar ones closer and the dissimilar ones further away through embedding mapping.Extensive experiments on both real-world and synthetic datasets show the effectiveness of this algorithm.Average clustering metrics on various datasets improved by 8%compared to the comparison algorithm. 展开更多
关键词 Metric learning semi-supervised clustering prototypical network feature mapping
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Optimization method for a radar situation interface from error-cognition to information feature mapping
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作者 WU Xiaoli WEI Wentao +2 位作者 CALDWELL Sabrina XUE Chengqi WANG Linlin 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2022年第4期924-937,共14页
With the rapid development of digital and intelligent information systems, display of radar situation interface has become an important challenge in the field of human-computer interaction. We propose a method for the... With the rapid development of digital and intelligent information systems, display of radar situation interface has become an important challenge in the field of human-computer interaction. We propose a method for the optimization of radar situation interface from error-cognition through the mapping of information characteristics. A mapping method of matrix description is adopted to analyze the association properties between error-cognition sets and design information sets. Based on the mapping relationship between the domain of error-cognition and the domain of design information, a cross-correlational analysis is carried out between error-cognition and design information.We obtain the relationship matrix between the error-cognition of correlation between design information and the degree of importance among design information. Taking the task interface of a warfare navigation display as an example, error factors and the features of design information are extracted. Based on the results, we also propose an optimization design scheme for the radar situation interface. 展开更多
关键词 radar situation interface error-cognition information feature mapping visual information display
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Feature Mapping and Recuperation by Using Elliptical Basis Function Networks for Robust Speaker Verification
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作者 李昕 郑宇 江芳泽 《Journal of Shanghai University(English Edition)》 CAS 2002年第4期331-336,共6页
The performance of speaker verification systems is often compromised under real world environments. For example, variations in handset characteristics could cause severe performance degradation. This paper presents a... The performance of speaker verification systems is often compromised under real world environments. For example, variations in handset characteristics could cause severe performance degradation. This paper presents a novel method to overcome this problem by using a non linear handset mapper. Under this method, a mapper is constructed by training an elliptical basis function network using distorted speech features as inputs and the corresponding clean features as the desired outputs. During feature recuperation, clean features are recovered by feeding the distorted features to the feature mapper. The recovered features are then presented to a speaker model as if they were derived from clean speech. Experimental evaluations based on 258 speakers of the TIMIT and NTIMIT corpuses suggest that the feature mappers improve the verification performance remarkably. 展开更多
关键词 feature mapping and recurpuration elliptical basis function (EBF) networks speaker verification.
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DGConv: A Novel Convolutional Neural Network Approach for Weld Seam Depth Image Detection
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作者 Pengchao Li Fang Xu +3 位作者 Jintao Wang Haibing Guo Mingmin Liu Zhenjun Du 《Computers, Materials & Continua》 SCIE EI 2024年第2期1755-1771,共17页
We propose a novel image segmentation algorithm to tackle the challenge of limited recognition and segmentation performance in identifying welding seam images during robotic intelligent operations.Initially,to enhance... We propose a novel image segmentation algorithm to tackle the challenge of limited recognition and segmentation performance in identifying welding seam images during robotic intelligent operations.Initially,to enhance the capability of deep neural networks in extracting geometric attributes from depth images,we developed a novel deep geometric convolution operator(DGConv).DGConv is utilized to construct a deep local geometric feature extraction module,facilitating a more comprehensive exploration of the intrinsic geometric information within depth images.Secondly,we integrate the newly proposed deep geometric feature module with the Fully Convolutional Network(FCN8)to establish a high-performance deep neural network algorithm tailored for depth image segmentation.Concurrently,we enhance the FCN8 detection head by separating the segmentation and classification processes.This enhancement significantly boosts the network’s overall detection capability.Thirdly,for a comprehensive assessment of our proposed algorithm and its applicability in real-world industrial settings,we curated a line-scan image dataset featuring weld seams.This dataset,named the Standardized Linear Depth Profile(SLDP)dataset,was collected from actual industrial sites where autonomous robots are in operation.Ultimately,we conducted experiments utilizing the SLDP dataset,achieving an average accuracy of 92.7%.Our proposed approach exhibited a remarkable performance improvement over the prior method on the identical dataset.Moreover,we have successfully deployed the proposed algorithm in genuine industrial environments,fulfilling the prerequisites of unmanned robot operations. 展开更多
关键词 Weld image detection deep learning semantic segmentation depth map geometric feature extraction
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Application of Self-Organizing Feature Map Neural Network Based on K-means Clustering in Network Intrusion Detection 被引量:4
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作者 Ling Tan Chong Li +1 位作者 Jingming Xia Jun Cao 《Computers, Materials & Continua》 SCIE EI 2019年第7期275-288,共14页
Due to the widespread use of the Internet,customer information is vulnerable to computer systems attack,which brings urgent need for the intrusion detection technology.Recently,network intrusion detection has been one... Due to the widespread use of the Internet,customer information is vulnerable to computer systems attack,which brings urgent need for the intrusion detection technology.Recently,network intrusion detection has been one of the most important technologies in network security detection.The accuracy of network intrusion detection has reached higher accuracy so far.However,these methods have very low efficiency in network intrusion detection,even the most popular SOM neural network method.In this paper,an efficient and fast network intrusion detection method was proposed.Firstly,the fundamental of the two different methods are introduced respectively.Then,the selforganizing feature map neural network based on K-means clustering(KSOM)algorithms was presented to improve the efficiency of network intrusion detection.Finally,the NSLKDD is used as network intrusion data set to demonstrate that the KSOM method can significantly reduce the number of clustering iteration than SOM method without substantially affecting the clustering results and the accuracy is much higher than Kmeans method.The Experimental results show that our method can relatively improve the accuracy of network intrusion and significantly reduce the number of clustering iteration. 展开更多
关键词 K-means clustering self-organizing feature map neural network network security intrusion detection NSL-KDD data set
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Instance Retrieval Using Region of Interest Based CNN Features
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作者 Jingcheng Chen Zhili Zhou +1 位作者 Zhaoqing Pan Ching-nung Yang 《Journal of New Media》 2019年第2期87-99,共13页
Recently, image representations derived by convolutional neural networks(CNN) have achieved promising performance for instance retrieval, and they outperformthe traditional hand-crafted image features. However, most o... Recently, image representations derived by convolutional neural networks(CNN) have achieved promising performance for instance retrieval, and they outperformthe traditional hand-crafted image features. However, most of existing CNN-based featuresare proposed to describe the entire images, and thus they are less robust to backgroundclutter. This paper proposes a region of interest (RoI)-based deep convolutionalrepresentation for instance retrieval. It first detects the region of interests (RoIs) from animage, and then extracts a set of RoI-based CNN features from the fully-connected layerof CNN. The proposed RoI-based CNN feature describes the patterns of the detected RoIs,so that the visual matching can be implemented at image region-level to effectively identifytarget objects from cluttered backgrounds. Moreover, we test the performance of theproposed RoI-based CNN feature, when it is extracted from different convolutional layersor fully-connected layers. Also, we compare the performance of RoI-based CNN featurewith those of the state-of-the-art CNN features on two instance retrieval benchmarks.Experimental results show that the proposed RoI-based CNN feature provides superiorperformance than the state-of-the-art CNN features for in-stance retrieval. 展开更多
关键词 Image retrieval instance retrieval ROI CNN convolutional layer convolutional feature maps
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Fast and Accurate Machine Learning Inverse Lithography Using Physics Based Feature Maps and Specially Designed DCNN
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作者 Xuelong Shi Yan Yan +4 位作者 Tao Zhou Xueru Yu Chen Li Shoumian Chen Yuhang Zhao 《Journal of Microelectronic Manufacturing》 2020年第4期51-58,共8页
Inverse lithography technology(ILT)is intended to achieve optimal mask design to print a lithography target for a given lithography process.Full chip implementation of rigorous inverse lithography remains a challengin... Inverse lithography technology(ILT)is intended to achieve optimal mask design to print a lithography target for a given lithography process.Full chip implementation of rigorous inverse lithography remains a challenging task because of enormous computational resource requirements and long computational time.To achieve full chip ILT solution,attempts have been made by using machine learning techniques based on deep convolution neural network(DCNN).The reported input for such DCNN is the rasterized images of the lithography target;such pure geometrical input requires DCNN to possess considerable number of layers to learn the optical properties of the mask,the nonlinear imaging process,and the rigorous ILT algorithm as well.To alleviate the difficulties,we have proposed the physics based optimal feature vector design for machine learning ILT in our early report.Although physics based feature vector followed by feedforward neural network can provide the solution to machine learning ILT,the feature vector is long and it can consume considerable amount of memory resource in practical implementation.To improve the resource efficiency,we proposed a hybrid approach in this study by combining first few physics based feature maps with a specially designed DCNN structure to learn the rigorous ILT algorithm.Our results show that this approach can make machine learning ILT easy,fast and more accurate. 展开更多
关键词 Optimal feature maps inverse lithography technology(ILT) deep convolution neural network(DCNN).
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An Emotion Analysis Method Using Multi-Channel Convolution Neural Network in Social Networks 被引量:1
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作者 Xinxin Lu Hong Zhang 《Computer Modeling in Engineering & Sciences》 SCIE EI 2020年第10期281-297,共17页
As an interdisciplinary comprehensive subject involving multidisciplinary knowledge,emotional analysis has become a hot topic in psychology,health medicine and computer science.It has a high comprehensive and practica... As an interdisciplinary comprehensive subject involving multidisciplinary knowledge,emotional analysis has become a hot topic in psychology,health medicine and computer science.It has a high comprehensive and practical application value.Emotion research based on the social network is a relatively new topic in the field of psychology and medical health research.The text emotion analysis of college students also has an important research significance for the emotional state of students at a certain time or a certain period,so as to understand their normal state,abnormal state and the reason of state change from the information they wrote.In view of the fact that convolutional neural network cannot make full use of the unique emotional information in sentences,and the need to label a large number of highquality training sets for emotional analysis to improve the accuracy of the model,an emotional analysismodel using the emotional dictionary andmultichannel convolutional neural network is proposed in this paper.Firstly,the input matrix of emotion dictionary is constructed according to the emotion information,and the different feature information of sentences is combined to form different network input channels,so that the model can learn the emotion information of input sentences from various feature representations in the training process.Then,the loss function is reconstructed to realize the semi supervised learning of the network.Finally,experiments are carried on COAE 2014 and self-built data sets.The proposed model can not only extract more semantic information in emotional text,but also learn the hidden emotional information in emotional text.The experimental results show that the proposed emotion analysis model can achieve a better classification performance.Compared with the best benchmark model gram-CNN,the F1 value can be increased by 0.026 in the self-built data set,and it can be increased by 0.032 in the COAE 2014 data set. 展开更多
关键词 Emotion analysis model emotion dictionary convolution neural network semi supervised learning deep learning pooling feature feature mapping
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CLUSTERING OF DOA DATA IN RADAR PULSE BASED ON SOFM AND CDBW 被引量:2
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作者 Dai Shengbo Lei Wuhu +1 位作者 Cheng Yizhe Wang Di 《Journal of Electronics(China)》 2014年第2期107-114,共8页
Clustering is the main method of deinterleaving of radar pulse using multi-parameter.However,the problem in clustering of radar pulses lies in finding the right number of clusters.To solve this problem,a method is pro... Clustering is the main method of deinterleaving of radar pulse using multi-parameter.However,the problem in clustering of radar pulses lies in finding the right number of clusters.To solve this problem,a method is proposed based on Self-Organizing Feature Maps(SOFM) and Composed Density between and within clusters(CDbw).This method firstly extracts the feature of Direction Of Arrival(DOA) data by SOFM using the characteristic of DOA parameter,and then cluster of SOFM.Through computing the cluster validity index CDbw,the right number of clusters is found.The results of simulation show that the method is effective in sorting the data of DOA. 展开更多
关键词 Self-Organizing feature Maps(SOFM) Composed Density between and within clusters(CDbw) Hierarchical clustering
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An improved de-interleaving algorithm of radar pulses based on SOFM with self-adaptive network topology 被引量:1
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作者 JIANG Wen FU Xiongjun +1 位作者 CHANG Jiayun QIN Rui 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2020年第4期712-721,共10页
As a core part of the electronic warfare(EW) system,de-interleaving is used to separate interleaved radar signals. As interleaved radar pulses become more complex and denser, intelligent classification of radar signal... As a core part of the electronic warfare(EW) system,de-interleaving is used to separate interleaved radar signals. As interleaved radar pulses become more complex and denser, intelligent classification of radar signals has become very important. The self-organizing feature map(SOFM) is an excellent artificial neural network, which has huge advantages in intelligent classification of complex data. However, the de-interleaving process based on SOFM is faced with the problems that the initialization of the map size relies on prior information and the network topology cannot be adaptively adjusted. In this paper, an SOFM with self-adaptive network topology(SANT-SOFM) algorithm is proposed to solve the above problems. The SANT-SOFM algorithm first proposes an adaptive proliferation algorithm to adjust the map size, so that the initialization of the map size is no longer dependent on prior information but is gradually adjusted with the input data. Then,structural optimization algorithms are proposed to gradually optimize the topology of the SOFM network in the iterative process,constructing an optimal SANT. Finally, the optimized SOFM network is used for de-interleaving radar signals. Simulation results show that SANT-SOFM could get excellent performance in complex EW environments and the probability of getting the optimal map size is over 95% in the absence of priori information. 展开更多
关键词 de-interleaving self-organizing feature map(SOFM) self-adaptive network topology(SANT)
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A Modified SOFM Method for Point Cloud Segmentation in Reverse Engineering 被引量:4
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作者 LIU Xue-mei ZHANG Shu-sheng BAI Xiao-liang 《Computer Aided Drafting,Design and Manufacturing》 2005年第2期33-37,共5页
The purpose of reverse engineering is to convert a large point cloud into a CAD model. In reverse engineering, the key issue is segmentation, i.e. studying how to subdivide the point cloud into smaller regions, where ... The purpose of reverse engineering is to convert a large point cloud into a CAD model. In reverse engineering, the key issue is segmentation, i.e. studying how to subdivide the point cloud into smaller regions, where each of them can be approximated by a single surface. Segmentation is relatively simple, if regions are bounded by sharp edges and small blends; problems arise when smoothly connected regions need to be separated. In this paper, a modified self-organizing feature map neural network (SOFM) is used to solve segmentation problem. Eight dimensional feature vectors (3-dimensional coordinates, 3-dimensional normal vectors, Gaussian curvature and mean curvature) are taken as input for SOFM. The weighted Euclidean distance measure is used to improve segmentation result. The method not only can deal with regions bounded by sharp edges, but also is very efficient to separating smoothly connected regions. The segmentation method using SOFM is robust to noise, and it operates directly on the point cloud. An examples is given to show the effect of SOFM algorithm. 展开更多
关键词 reverse engineering point cloud segmentation neural network self-organizing feature map
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MIA-UNet:Multi-Scale Iterative Aggregation U-Network for Retinal Vessel Segmentation
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作者 Linfang Yu Zhen Qin +1 位作者 Yi Ding Zhiguang Qin 《Computer Modeling in Engineering & Sciences》 SCIE EI 2021年第11期805-828,共24页
As an important part of the new generation of information technology,the Internet of Things(IoT)has been widely concerned and regarded as an enabling technology of the next generation of health care system.The fundus ... As an important part of the new generation of information technology,the Internet of Things(IoT)has been widely concerned and regarded as an enabling technology of the next generation of health care system.The fundus photography equipment is connected to the cloud platform through the IoT,so as to realize the realtime uploading of fundus images and the rapid issuance of diagnostic suggestions by artificial intelligence.At the same time,important security and privacy issues have emerged.The data uploaded to the cloud platform involves more personal attributes,health status and medical application data of patients.Once leaked,abused or improperly disclosed,personal information security will be violated.Therefore,it is important to address the security and privacy issues of massive medical and healthcare equipment connecting to the infrastructure of IoT healthcare and health systems.To meet this challenge,we propose MIA-UNet,a multi-scale iterative aggregation U-network,which aims to achieve accurate and efficient retinal vessel segmentation for ophthalmic auxiliary diagnosis while ensuring that the network has low computational complexity to adapt to mobile terminals.In this way,users do not need to upload the data to the cloud platform,and can analyze and process the fundus images on their own mobile terminals,thus eliminating the leakage of personal information.Specifically,the interconnection between encoder and decoder,as well as the internal connection between decoder subnetworks in classic U-Net are redefined and redesigned.Furthermore,we propose a hybrid loss function to smooth the gradient and deal with the imbalance between foreground and background.Compared with the UNet,the segmentation performance of the proposed network is significantly improved on the premise that the number of parameters is only increased by 2%.When applied to three publicly available datasets:DRIVE,STARE and CHASE DB1,the proposed network achieves the accuracy/F1-score of 96.33%/84.34%,97.12%/83.17%and 97.06%/84.10%,respectively.The experimental results show that the MIA-UNet is superior to the state-of-the-art methods. 展开更多
关键词 Retinal vessel segmentation security and privacy redesigned skip connection feature maps aggregation hybrid loss function
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A Study on Classification and Detection of Small Moths Using CNN Model
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作者 Sang-Hyun Lee 《Computers, Materials & Continua》 SCIE EI 2022年第4期1987-1998,共12页
Currently,there are many limitations to classify images of small objects.In addition,there are limitations such as error detection due to external factors,and there is also a disadvantage that it is difficult to accur... Currently,there are many limitations to classify images of small objects.In addition,there are limitations such as error detection due to external factors,and there is also a disadvantage that it is difficult to accurately distinguish between various objects.This paper uses a convolutional neural network(CNN)algorithm to recognize and classify object images of very small moths and obtain precise data images.A convolution neural network algorithm is used for image data classification,and the classified image is transformed into image data to learn the topological structure of the image.To improve the accuracy of the image classification and reduce the loss rate,a parameter for finding a fast-optimal point of image classification is set by a convolutional neural network and a pixel image as a preprocessor.As a result of this study,we applied a convolution neural network algorithm to classify the images of very small moths by capturing precise images of the moths.Experimental results showed that the accuracy of classification of very small moths was more than 90%. 展开更多
关键词 Convolution neural network rectified linear unit activation function pooling feature map
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Pattern recognition of seismogenic nodes using Kohonen selforganizing map: example in west and south west of Alborz region in Iran
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作者 Mostafa Allamehzadeh Soma Durudi Leila Mahshadnia 《Earthquake Science》 CSCD 2017年第3期145-155,共11页
Pattern recognition of seismic and mor- phostructural nodes plays an important role in seismic hazard assessment. This is a known fact in seismology that tectonic nodes are prone areas to large earthquake and have thi... Pattern recognition of seismic and mor- phostructural nodes plays an important role in seismic hazard assessment. This is a known fact in seismology that tectonic nodes are prone areas to large earthquake and have this potential. They are identified by morphostructural analysis. In this study, the Alborz region has considered as studied case and locations of future events are forecast based on Kohonen Self-Organized Neural Network. It has been shown how it can predict the location of earthquake, and identifies seismogenic nodes which are prone to earthquake of M5.5+ at the West of Alborz in Iran by using International Institute Earthquake Engineering and Seismology earthquake catalogs data. First, the main faults and tectonic lineaments have been identified based on MZ (land zoning method) method. After that, by using pattern recognition, we generalized past recorded events to future in order to show the region of probable future earthquakes. In other word, hazardous nodes have determined among all nodes by new catalog generated Self-organizing feature maps (SOFM). Our input data are extracted from catalog, consists longitude and latitude of past event between 1980-2015 with magnitude larger or equal to 4.5. It has concluded node D1 is candidate for big earthquakes in comparison with other nodes and other nodes are in lower levels of this potential. 展开更多
关键词 Clustering - Earthquake prediction ~ Self-organizing feature maps (SOFM)
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Shallow Feature-driven Dual-edges Localization Network for Weakly Supervised Localization
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作者 Wenjun Hui Guanghua Gu Bo Wang 《Machine Intelligence Research》 EI CSCD 2023年第6期923-936,共14页
Weakly supervised object localization mines the pixel-level location information based on image-level annotations.The traditional weakly supervised object localization approaches exploit the last convolutional feature... Weakly supervised object localization mines the pixel-level location information based on image-level annotations.The traditional weakly supervised object localization approaches exploit the last convolutional feature map to locate the discriminative regions with abundant semantics.Although it shows the localization ability of classification network,the process lacks the use of shallow edge and texture features,which cannot meet the requirement of object integrity in the localization task.Thus,we propose a novel shallow feature-driven dual-edges localization(DEL)network,in which dual kinds of shallow edges are utilized to mine entire target object regions.Specifically,we design an edge feature mining(EFM)module to extract the shallow edge details through the similarity measurement between the original class activation map and shallow features.We exploit the EFM module to extract two kinds of edges,named the edge of the shallow feature map and the edge of shallow gradients,for enhancing the edge details of the target object in the last convolutional feature map.The total process is proposed during the inference stage,which does not bring extra training costs.Extensive experiments on both the ILSVRC and CUB-200-2011 datasets show that the DEL method obtains consistency and substantial performance improvements compared with the existing methods. 展开更多
关键词 Weakly supervised object localization edge feature mining edge of shallow feature map edge of shallow gradients similarity measurement
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Solving Topological and Geometrical Constraints in Bridge Feature Model
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作者 彭卫兵 宋亮亮 潘国帅 《Tsinghua Science and Technology》 SCIE EI CAS 2008年第S1期228-233,共6页
The capacity that computer can solve more complex design problem was gradually increased. Bridge designs need a breakthrough in the current development limitations, and then become more intelligent and integrated. Thi... The capacity that computer can solve more complex design problem was gradually increased. Bridge designs need a breakthrough in the current development limitations, and then become more intelligent and integrated. This paper proposes a new parametric and feature-based computer aided design (CAD) models which can represent families of bridge objects, includes knowledge representation, three-dimensional geometric topology relationships. The realization of a family member is found by solving first the geometric constraints, and then the topological constraints. From the geometric solution, constraint equations are constructed. Topology solution is developed by feature dependencies graph between bridge objects. Finally, feature parameters are proposed to drive bridge design with feature parameters. Results from our implementation show that the method can help to facilitate bridge design. 展开更多
关键词 bridge intelligent design feature mapping feature dependence graph constraint equations
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A global path planning algorithm based on the feature map 被引量:2
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作者 Gongchang Ren Peng Liu Zhou He 《IET Cyber-Systems and Robotics》 EI 2022年第1期15-24,共10页
The feature map is a characteristic of high computational efficiency,but it is seldom used in path planning due to its lack of expression of environmental details.To solve this problem,a global path planning algorithm... The feature map is a characteristic of high computational efficiency,but it is seldom used in path planning due to its lack of expression of environmental details.To solve this problem,a global path planning algorithm based on the feature map is proposed based on the directionality of line segment features.First,the robot searches the path along the direction of the target position but turns to search in the direction parallel to the obstacle,which it approaches until the line between the robot and the target position does not intersect with obstacles.Then it turns to the target position,keep searching the path.Meanwhile,the problems of the direction selection of turning point,corner point and obstacle circumvention in the searching process are analysed and corresponding solutions are put forth.Finally,a path optimisation algorithm with variable parameters is proposed,making the optimised path shorter and smoother.Simulation experiments demonstrate that the proposed algorithm is superior to A*algorithm in terms of computation time and path length,especially of the computation efficiency. 展开更多
关键词 A*algorithm feature map global path planning path optimisation variable parameters
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Visualization of amino acid composition differences between processed protein from different animal species by self-organizing feature maps
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作者 Xingfan ZHOU Zengling YANG +1 位作者 Longjian CHEN Lujia HAN 《Frontiers of Agricultural Science and Engineering》 2016年第2期171-180,共10页
Amino acids are the dominant organic components of processed animal proteins,however there has been limited investigation of differences in their composition between various protein sources.Information on these differ... Amino acids are the dominant organic components of processed animal proteins,however there has been limited investigation of differences in their composition between various protein sources.Information on these differences will not only be helpful for their further utilization but also provide fundamental information for developing species-specific identification methods.In this study,self-organizing feature maps(SOFM) were used to visualize amino acid composition of fish meal,and meat and bone meal(MBM) produced from poultry,ruminants and swine.SOFM display the similarities and differences in amino acid composition between protein sources and effectively improve data transparency.Amino acid composition was shown to be useful for distinguishing fish meal from MBM due to their large concentration differences between glycine,lysine and proline.However,the amino acid composition of the three MBMs was quite similar.The SOFM results were consistent with those obtained by analysis of variance and principal component analysis but more straightforward.SOFM was shown to have a robust sample linkage capacity and to be able to act as a powerful means to link different sample for further data mining. 展开更多
关键词 self-organizing feature maps VISUALIZATION processed animal proteins(PAPs) amino acid
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Bagging with CTD–A Novel Signature for the Hierarchical Prediction of Secreted Protein Trafcking in Eukaryotes 被引量:1
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作者 Geetha Govindan Achuthsankar S.Nair 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2013年第6期385-390,共6页
Protein trafficking or protein sorting in eukaryotes is a complicated process and is carried out based on the information contaified in the protein. Many methods reported prediction of the subcellular location of prot... Protein trafficking or protein sorting in eukaryotes is a complicated process and is carried out based on the information contaified in the protein. Many methods reported prediction of the subcellular location of proteins from sequence information. However, most of these prediction methods use a flat structure or parallel architecture to perform prediction. In this work, we introduce ensemble classifiers with features that are extracted directly from full length protein sequences to predict locations in the protein-sorting pathway hierarchically. Sequence driven features, sequence mapped features and sequence autocorrelation features were tested with ensemble learners and their performances were compared. When evaluated by independent data testing, ensemble based-bagging algorithms with sequence feature composition, transition and distribution (CTD) successfully classified two datasets with accuracies greater than 90%. We compared our results with similar published methods, and our method equally performed with the others at two levels in the secreted pathway. This study shows that the feature CTD extracted from protein sequences is effective in capturing biological features among compartments in secreted pathways. 展开更多
关键词 Sequence driven features Sequence mapped features AUTOCORRELATION Ensemble classifiter Protein Sorting
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On Reproducing Kernel Banach Spaces:Generic Definitions and Unified Framework of Constructions
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作者 Rong Rong LIN Hai Zhang ZHANG Jun ZHANG 《Acta Mathematica Sinica,English Series》 SCIE CSCD 2022年第8期1459-1483,共25页
Recently,there has been emerging interest in constructing reproducing kernel Banach spaces(RKBS)for applied and theoretical purposes such as machine learning,sampling reconstruction,sparse approximation and functional... Recently,there has been emerging interest in constructing reproducing kernel Banach spaces(RKBS)for applied and theoretical purposes such as machine learning,sampling reconstruction,sparse approximation and functional analysis.Existing constructions include the reflexive RKBS via a bilinear form,the semi-inner-product RKBS,the RKBS with?~1 norm,the p-norm RKBS via generalized Mercer kernels,etc.The definitions of RKBS and the associated reproducing kernel in those references are dependent on the construction.Moreover,relations among those constructions are unclear.We explore a generic definition of RKBS and the reproducing kernel for RKBS that is independent of construction.Furthermore,we propose a framework of constructing RKBSs that leads to new RKBSs based on Orlicz spaces and unifies existing constructions mentioned above via a continuous bilinear form and a pair of feature maps.Finally,we develop representer theorems for machine learning in RKBSs constructed in our framework,which also unifies representer theorems in existing RKBSs. 展开更多
关键词 Reproducing kernel Banach spaces feature maps reproducing kernels machine learning the representer theorem
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