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GPM6A在肺癌组织中的表达差异及临床意义 被引量:2
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作者 庚跃琦 孔令珍 +1 位作者 贾垂明 李丹丹 《现代肿瘤医学》 CAS 2019年第9期1546-1550,共5页
目的:研究糖蛋白6A(GPM6A)在肺癌组织中的表达差异和突变情况,探讨其对临床预后和治疗的价值。方法:利用基因表达数据库(gene expression omnibus,GEO)下载GPM6A基因表达谱资料及临床相关资料。分析GPM6A在肿瘤组织及相匹配的正常组织... 目的:研究糖蛋白6A(GPM6A)在肺癌组织中的表达差异和突变情况,探讨其对临床预后和治疗的价值。方法:利用基因表达数据库(gene expression omnibus,GEO)下载GPM6A基因表达谱资料及临床相关资料。分析GPM6A在肿瘤组织及相匹配的正常组织中的表达差异,研究GPM6A的表达差异与肺癌患者临床病理特征的相关性及其对预后的影响。利用肿瘤基因组图谱(the cancer genome atlas,TCGA)公共数据库对比分析GPM6A基因变异情况。结果:肺癌组织中的GPM6A表达明显低于配对的正常组织(P<0.001),GPM6A表达与肿瘤组织的大小(P<0.05)、病例理分期(P<0.05)相关,肿瘤组织恶性程度越高,GPM6A表达水平越低。在正常组织当中,GPM6A表达水平与患者存在吸烟史(P<0.05)相关,存在吸烟史的患者要比无吸烟史患者GPM6A水平低,但在肿瘤组织中GPM6A表达与吸烟史无相关性。经由建立Cox回归模型发现影响肺癌患者生存预后的独立因素分别为年龄和淋巴结转移(P<0.05)。GPM6A基因拷贝数广泛变异,推测是由于杂合子的缺失导致了GPM6A表达水平降低。结论:在肺癌组织中GPM6A低表达为影响患者预后的不良因素之一,GPM6A可为预测肿瘤发生、转移及判断预后的有效分子标记物。 展开更多
关键词 肺癌 gpm6a 临床病理表现 预后
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基于生物信息学方法分析脑胶质瘤组织中糖蛋白M6A的表达
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作者 张玉松 韩亚迪 《医学研究杂志》 2023年第12期89-92,133,共5页
目的探讨糖蛋白M6A(glycoprotein M6A,GPM6A)在脑胶质瘤标本中的表达及其临床意义。方法运用生物信息学方法分析中国脑胶质瘤基因组图谱(Chinese Glioma Genome Atlas,CGGA)数据库325例患者GPM6A表达情况及其与临床病理参数关系。运用ST... 目的探讨糖蛋白M6A(glycoprotein M6A,GPM6A)在脑胶质瘤标本中的表达及其临床意义。方法运用生物信息学方法分析中国脑胶质瘤基因组图谱(Chinese Glioma Genome Atlas,CGGA)数据库325例患者GPM6A表达情况及其与临床病理参数关系。运用STRING在线数据库筛选分析GO功能注释以及与GPM6A相互作用的可能蛋白-蛋白作用功能网络。利用TIMER2.0数据库评估GPM6A与胶质瘤细胞纯度及浸润性CD8+T细胞水平之间的关系。结果CGGA数据库在线分析显示,在各病理组织学分级(WHO:G_(2)、G_(3)、G_(4)级)与各组织学病理分型中均有GPM6A表达,各分级或各分型脑胶质瘤的GPM6A表达水平比较,差异均有统计学意义(分级:F=50.25,P<0.001;分型:F=14.26,P<0.001);GPM6A表达水平与分子IDH突变状态、1p19q联合缺失以及患者年龄密切相关,差异有统计学意义(P均<0.01),但与患者性别无关(t=1.45,P>0.05)。GPM6A表达水平在原发性胶质瘤中稍高于继发性胶质瘤,差异无统计学意义(t=1.82,P>0.05)。患者生存期数据分析显示,在低级别胶质瘤中GPM6A低表达的患者生存期较GPM6A高表达患者明显缩短(χ^(2)=69.79,P<0.001),但GBM患者中,无论GPM6A表达水平高低,生存期差异无统计学意义(χ^(2)=0.63,P>0.05)。GO功能分析显示,GPM6A与神经系统中跨膜蛋白运输、突触形成与发育、细胞之间信息交流等功能密切相关。TIMER2.0数据库分析显示GPM6A与胶质瘤肿瘤细胞纯度和浸润的CD8+T细胞水平正相关。结论GPM6A低表达胶质瘤患者预后显著差于高表达患者,其表达水平可作为评估胶质瘤预后的预测因素。 展开更多
关键词 gpm6a 胶质瘤 表达 预后意义
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下调GPM6B基因抑制平滑肌表达特异性标记蛋白
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作者 张晓萌 王姗 +8 位作者 常盼 赵会寿 谢华宁 闫凤 夏云龙 张静隆 张玲 陶凌 王海昌 《心脏杂志》 CAS 2018年第5期508-511,516,共5页
目的研究糖蛋白M6B(Glycoprotein M6B,GPM6B)基因对间充质细胞C3H10T1/2向平滑肌细胞分化的影响。方法将慢病毒感染后的sh-GPM6B细胞作为处理组,慢病毒感染后的sh-Scramble细胞作为对照组进行后续实验。用sh-GPM6B质粒和工具质粒在293T... 目的研究糖蛋白M6B(Glycoprotein M6B,GPM6B)基因对间充质细胞C3H10T1/2向平滑肌细胞分化的影响。方法将慢病毒感染后的sh-GPM6B细胞作为处理组,慢病毒感染后的sh-Scramble细胞作为对照组进行后续实验。用sh-GPM6B质粒和工具质粒在293T细胞系包装慢病毒。用病毒液感染C3H10T1/2小鼠间充质细胞系制备sh-GPM6B稳转细胞系。荧光显微镜观察病毒转染效率,Western法检测GPM6B基因的干涉效率。慢病毒shRNA干涉抑制GPM6B基因表达后,通过TGF-β1诱导对照组和sh-GPM6B细胞向平滑肌分化。Western blot法检测平滑肌特异标记蛋白SM-MHC和α-SMA表达水平。q-PCR法检测SM-MHC和α-SMA的mRNA转录水平。结果慢病毒感染后sh-GPM6B干涉细胞GPM6B基因蛋白表达降低至对照组(40~70)%水平。Sh-GPM6B处理组细胞与sh-Scramble对照组细胞相比,SM-MHC蛋白表达水平显著下调(P <0. 05); SM-MHC和α-SMA mRNA转录水平明显降低(P <0. 01)。结论下调GPM6B基因可抑制TGF-β1诱导的间充质细胞向平滑肌细胞分化。 展开更多
关键词 GPM6B基因 间充质细胞 平滑肌 分化 慢病毒
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Tumor Vascular Markers: Possibilities for Detection of Breast Carcinoma
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作者 Miroslava Bilecova-Rabajdova Peter Urban +3 位作者 Andrea Gresova Anna Birkova Alexander Ostro Maria Marekova 《Journal of Chemistry and Chemical Engineering》 2012年第2期118-123,共6页
Breast cancer is one of the world's most urgent health problems. The first symptoms of mammary malignancies are manifested only at an advanced stage with significant mortality. Detecting this disease at an early stag... Breast cancer is one of the world's most urgent health problems. The first symptoms of mammary malignancies are manifested only at an advanced stage with significant mortality. Detecting this disease at an early stage gives the majority of patients a better chance of survival. The aim was to search for changes in gene expression of specific tumor vascular markers like death receptor 6 (Dr6) and glycoprotein M6B (Gpm6B) in the blood of patients with breast cancer. All subjects were divided into two groups. First group with patients are with different grades of breats tumors (n = 30). Second group consists from healthy women (n = 15). After isolation of mRNA from blood, RT-PCR was followed by gel electrophoresis. For statistical analysis one-way ANOVA was used with Student's T test using GraphPad InStat software. Significant changes in mRNA levels of gene Dr6 in all grades of first stage breast cancer were detected. The mRNA levels of Dr6 showed a rising tendency from GI (116% higher value than control) to G3 (198% higher than control). During monitoring of the mRNA level of Gpm6B, a weaker increase was observed than in Dr6. The difference in GI was only 8% higher compared with controls and 44% at G3. From our results it can be concluded that DR6 is a more suitable marker for the diagnosis of breast malignancies in the early stages than Gpm6B. In our work, a non-invasive method for more timely and precise determination of the earlier stages of breast cancer is described, which could also contribute to monitoring the effectiveness of treatment, or regression of this disease. 展开更多
关键词 RT-PCR Dr6 Gpm6B gynecological malignancies breast cancer.
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Integrated bioinformatics identifies the dysregulation induced by aberrant gene methylation in colorectal carcinoma 被引量:2
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作者 Zhenyu Ye Yecheng Li +10 位作者 Jiaming Xie Zhenyu Feng Xiaodong Yang Yong Wu Yuwei Pu Jiawei Gao Xiangrong Xu Zhaobi Zhu Wei Li Wei Chen Chungen Xing 《Genes & Diseases》 SCIE 2021年第4期521-530,共10页
Colorectal carcinoma(CRC)is one of the most common cancers,and is associated with a poor dlinical outcome.The key genes and potential prognostic markers in colorectal carcinoma remain to be identfed and explored for c... Colorectal carcinoma(CRC)is one of the most common cancers,and is associated with a poor dlinical outcome.The key genes and potential prognostic markers in colorectal carcinoma remain to be identfed and explored for clinical application.DNA expression/methyl-ation profles were downloaded from the Gene Expression Omnibus(GEO)database to identify differentially expressed/methylated genes(DEGs and DEMs).A total of 255 genes and 372 genes were identified as being up-regulated and down-regulated,respectively,in GSE113513,GSE81558,and GSE89076.There were a total of 3350 hypermethylated genes and 443 hypomethylated genes identifed in GSE 48684.Twenty genes were found to be hypermethylated as well as down-regulated,and a functional enrichment analysis revealed that these genes were mainly involved in cancer-related pathways.Among these 20 genes,GPM6A,HAND2 and C2orf40 were related to poor outcomes in cancer patients based on a survival analysis.Concurrent decreases of GPM6A,HAND2 and C2orf40 protein expression were observed in highly-dif ferentiated colorectal carcinoma tissues,and higher expression levels were found in undifferentiated or minimally-differentiated colorectal carcinoma tissues.In conclusion,20 genes were found to be downregulated and hypermethylated in CRC,among which GPM6A,HAND2 and C2orf40 were explored for their potential prognostic value. 展开更多
关键词 BIOINFORMATICS C2orf40 Colorectal carcinoma gpm6a HAND2 HYPERMETHYLATION
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