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哈迪-温伯格平衡检验及其基因频率的估计 被引量:14
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作者 管宇 张香云 +3 位作者 徐群芳 吴志松 顾光同 聂文 《浙江林学院学报》 CAS CSCD 北大核心 2009年第1期122-126,共5页
哈迪-温伯格平衡定律(Hardy-Weinberg equilibrium,HWE)是群体遗传学中最重要的原理,是群体有性繁殖上下代之间基因频率与基因型频率是否保持平衡的检验尺度。在HWE检验时通常需要对各基因频率作估计。研究了存在显隐性时基因频率的极... 哈迪-温伯格平衡定律(Hardy-Weinberg equilibrium,HWE)是群体遗传学中最重要的原理,是群体有性繁殖上下代之间基因频率与基因型频率是否保持平衡的检验尺度。在HWE检验时通常需要对各基因频率作估计。研究了存在显隐性时基因频率的极大似然估计值的牛顿迭代算法,牛顿迭代算法的收敛速度快于EM算法;讨论了最小Pearson χ2统计量估计与极大似然法估计的近似关系。推荐极大似然估计牛顿迭代法和最小Pearson χ2估计法。 展开更多
关键词 哈迪-温伯格平衡 hwe检验 基因频率 极大似然估计 最小Pearson χ2估计
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用VBA语言开发群体遗传学统计分析软件 被引量:5
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作者 蔡颖 周霓 +3 位作者 许业莉 相大鹏 苏建晖 张林田 《法医学杂志》 CAS CSCD 2006年第6期417-420,共4页
目的开发适用于短串联重复序列(STR)基因座群体遗传学统计分析的软件,促进和加快STR基因座群体遗传学基础研究。方法选用简单易用的MicrosoftVBAforExcel语言,利用宏功能,开发STR基因座群体遗传学统计分析软件。结果开发建立了基于VBA... 目的开发适用于短串联重复序列(STR)基因座群体遗传学统计分析的软件,促进和加快STR基因座群体遗传学基础研究。方法选用简单易用的MicrosoftVBAforExcel语言,利用宏功能,开发STR基因座群体遗传学统计分析软件。结果开发建立了基于VBA语言的“群体遗传学分析易”软件,能进行STR基因座群体遗传学分析。结论开发的基于VBA语言的“群体遗传学分析易”软件,具有计算统计功能完善、输入格式兼容性好、使用方便、输出格式清晰易懂的特点,可在国内外STR基因座群体遗传学研究领域推广应用。 展开更多
关键词 短串联重复序列(STR) 群体遗传学 软件 hardy-weinberg平衡 连锁平衡 VBA
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Modelling of the populating development of the genome in the radiation condition of the environment 被引量:2
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作者 Andrey N. Volobuev Eugene S. Petrov 《Natural Science》 2011年第12期1029-1033,共5页
The existence of the genome population in condition of radiation environment has been considered. The differences between the laws of the allele frequencies for autosomal genes and genes linked to sex are described. R... The existence of the genome population in condition of radiation environment has been considered. The differences between the laws of the allele frequencies for autosomal genes and genes linked to sex are described. Radiation conditions were found at maintenance of the balance of the Hardy-Weinberg genotype in the population, as well as conditions of complete elimination of the targeted allele by ionizing radiation. Conclusions about the nature of radiation resistance of the population are drawn. 展开更多
关键词 Population Ionizing Radiation GENOTYPES Frequency of ALLELE RECESSIVE ALLELE HETEROZYGOTE hardy-weinberg equilibrium INBREEDING
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ANALYSIS ON GENETIC POLYMORPHISM OF 6 STR LOCI ON CHROMOSOME 12 IN CHINESE HAN POPULATION
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作者 左弘 郭雄 +5 位作者 康龙丽 平智广 王世捷 张宝弟 赖江华 耿冬 《Journal of Pharmaceutical Analysis》 SCIE CAS 2005年第2期66-69,73,共5页
Objective To analyze the genetic polymorphism of 6 STR loci (D12S358, D12S1675, D12S1663, D12S1697, D12S1725 and D12S1613) on chromosome 12 in Chinese Han population. Methods EDTA-blood specimens were collected from 1... Objective To analyze the genetic polymorphism of 6 STR loci (D12S358, D12S1675, D12S1663, D12S1697, D12S1725 and D12S1613) on chromosome 12 in Chinese Han population. Methods EDTA-blood specimens were collected from 153 unrelated individuals of Chinese Han population in Shaanxi province. Allele and genotype frequencies for the 6 STR loci were estimated and statistical parameters of polymorphism were calculated. Results 8 alleles and 18 genotypes, 10 alleles and 17 genotypes, 9 alleles and 15 genotypes, 12alleles and 29 genotypes, 12 alleles and 31 genotypes, 8 alleles and 11 genotypes were observed at D12S358, D12S1675, D12S1663, D12S1697, D12S1725 and D12S1613, respectively. No deviations of the observed allele frequency from Hardy-weinberg equilibrium expectations were found for any of these loci. The Heterozygotes of these 6 loci were 78.89%, 66.10%, 54.95%, 79.10%, 71.98% and 59.48%, respectively. It indicated the high genetic polymorphism of the loci in Chinese Han population. Conclusion The 6 STR loci belonged to the genetic marker system of high discriminutesation and high information in Chinese Han population and can be used in the study of gene-related diseases. 展开更多
关键词 short tandem repeat genetic polymorphism hardy-weinberg equilibrium chromosome 12
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ALLELE DISTRIBUTION OF D12S304, D12S313, D12S1583, D12S1640 AND D12S1708 IN CHINESE HAN POPULATION
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作者 平智广 郭雄 +3 位作者 耿冬 康龙丽 左弘 赖江华 《Journal of Pharmaceutical Analysis》 SCIE CAS 2005年第2期70-73,共4页
Objective To analyze the genetic polymorphism of 5 STR loci (D12S304, D12S313, D12S1583, D12S1640 and D12S1708) on chromosome 12 in Chinese Han population. Methods EDTA-anticoagulated blood specimens were collected fr... Objective To analyze the genetic polymorphism of 5 STR loci (D12S304, D12S313, D12S1583, D12S1640 and D12S1708) on chromosome 12 in Chinese Han population. Methods EDTA-anticoagulated blood specimens were collected from unrelated individuals of Chinese Han population in Shaanxi province. DNA samples were extracted with the Wizard Genomic DNA purification Kit and were amplified by polymerase chain reaction (PCR) technique. The PCR products were analyzed by ABI 3100 Genetic Analyzer. Results All 5 loci were in Hardy-Weinberg equilibrium. Allele and genotype frequencies, heterozygosity, power of discrimination, polymorphism information content, probability of paternity exclusion and matching probability of each locus were calculated in Excel 2002. Conclusion They are complex loci with lots of evenly distributed alleles and high heterozygosity in Chinese Han population. Thus they are informative polymorphic loci and valuable DNA marker which represents a superior alternative to many established STRs. 展开更多
关键词 short tandem repeat (STR) genetic polymorphism hardy-weinberg equilibrium chromosome 12
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