AIM:To investigate the differentiated whole genome expression profiling of gastric high-and low-grade intraepithelial neoplasia and early-stage adenocarcinoma.METHODS:Gastric specimens from an upper magnifying chromoe...AIM:To investigate the differentiated whole genome expression profiling of gastric high-and low-grade intraepithelial neoplasia and early-stage adenocarcinoma.METHODS:Gastric specimens from an upper magnifying chromoendoscopic targeted biopsy were collected from March 2010 to May 2013.Whole genome expression profiling was performed on 19 low-grade intraepithelial neoplasia(LGIN),20 high-grade intraepithelial neoplasia(HGIN),19 early-stage adenocarcinoma(EGC),and 19 chronic gastritis tissue samples using Agilent 4×44K Whole Human Genome microarrays.Differentially expressed genes between different types of lesions were identified using an unpaired t-test and corrected with the Benjamini and Hochberg false discovery rate algorithm.A gene ontology(GO)enrichment analysis was performed using the Gene Spring software GX 12.6.The differentially expressed gene was verified using a real-time TaqManPCR assay with independent tissue samples,including 26 LGIN,15 HGIN,14 EGC,and 20 chronic gastritis.The expression of G0S2 were further validated by immunohistochemical staining(IHC)in 24 LGIN,40 HGIN,30 EGC and 61 chronic gastritis specimens.RESULTS:The gene expression patterns of LGIN and HGIN tissues were distinct.There were 2521 significantly differentially expressed transcripts in HGIN,with951 upregulated and 1570 downregulated.A GO enrichment analysis demonstrated that the most striking overexpressed transcripts in HGIN compared with LGIN were in the category of metabolism,defense response,and nuclear factorκB(NF-κB)cascade.While the vast majority of transcripts had barely altered expression in HGIN and EGC tissues,only 38 transcripts were upregulated in EGC.A GO enrichment analysis revealed that the alterations of the immune response were most prominent in the progression from HGIN to EGC.It is worth noting that,compared with LGIN,289 transcriptswere expressed at higher levels both in HGIN and EGC.A characteristic gene,G0/G1 switch 2(G0S2)was one of the 289 transcripts and related to metabolism,the immune response,and the NF-κB cascade,and its expression was validated in independent samples through real-time TaqManPCR and immunohistochemical staining.In real-time PCR analysis,the expression of G0S2 was elevated both in HGIN and EGC compared with that in LGIN(P<0.01 and P<0.001,respectively).In IHC analysis,G0S2 immunoreactivity was detected in the cytoplasmic of neoplastic cells,but was undetectable in chronic gastritis cells.The G0S2 expression in HGIN was higher than that of LGIN(P=0.012,χ2=6.28)and EGC(P=0.008,χ2=6.94).CONCLUSION:A clear biological distinction between gastric high-and low-grade intraepithelial neoplasia was identified,and provides molecular evidence for clinical application.展开更多
According to the requirement of the project 'Establishment of the Physical Model of Earthquake PrecursorFields',this paper elucidates the train of thinking for research on the project and some scientific probl...According to the requirement of the project 'Establishment of the Physical Model of Earthquake PrecursorFields',this paper elucidates the train of thinking for research on the project and some scientific problems whichmust be studied i, the elucidation emphasizes that the core of this project is to study the conditions and processesof the generation of strong earthquakes. The paper first outlines the origin and development of the'strong-bodyearthquake-generating model' proposed by the author in the 1980;and then proves the reasonableness of themodel from three aspects, namely: deep structures, mechanical analysis and rock fracture experiments. Bystudying the tomographic image for the northern part of North China, it can be seen that the sources of strongearthquakes are all distributed in high-velocity bodies,or in the contact zone between high-velocity and lowvelocity bodies but nearer to the high-velocity body. It has been affirmed through studies of the mechanical modelsof hard and soft inclusions that the existence of a hard inclusion is an imPOrtant condition for the high concentration of large amounts of strain energy. A lot of theoretical and experimental studies have been made to investigate the conditions for rock instability; the results have consistently indicated that rock instability,sudden fracture and stress drop would be possible only if the stiffness of the source body is greater than the environmentalstiffness.展开更多
基金Supported by The specific grants of Public-Funded Projects in the Health Industry,Grant 200902002
文摘AIM:To investigate the differentiated whole genome expression profiling of gastric high-and low-grade intraepithelial neoplasia and early-stage adenocarcinoma.METHODS:Gastric specimens from an upper magnifying chromoendoscopic targeted biopsy were collected from March 2010 to May 2013.Whole genome expression profiling was performed on 19 low-grade intraepithelial neoplasia(LGIN),20 high-grade intraepithelial neoplasia(HGIN),19 early-stage adenocarcinoma(EGC),and 19 chronic gastritis tissue samples using Agilent 4×44K Whole Human Genome microarrays.Differentially expressed genes between different types of lesions were identified using an unpaired t-test and corrected with the Benjamini and Hochberg false discovery rate algorithm.A gene ontology(GO)enrichment analysis was performed using the Gene Spring software GX 12.6.The differentially expressed gene was verified using a real-time TaqManPCR assay with independent tissue samples,including 26 LGIN,15 HGIN,14 EGC,and 20 chronic gastritis.The expression of G0S2 were further validated by immunohistochemical staining(IHC)in 24 LGIN,40 HGIN,30 EGC and 61 chronic gastritis specimens.RESULTS:The gene expression patterns of LGIN and HGIN tissues were distinct.There were 2521 significantly differentially expressed transcripts in HGIN,with951 upregulated and 1570 downregulated.A GO enrichment analysis demonstrated that the most striking overexpressed transcripts in HGIN compared with LGIN were in the category of metabolism,defense response,and nuclear factorκB(NF-κB)cascade.While the vast majority of transcripts had barely altered expression in HGIN and EGC tissues,only 38 transcripts were upregulated in EGC.A GO enrichment analysis revealed that the alterations of the immune response were most prominent in the progression from HGIN to EGC.It is worth noting that,compared with LGIN,289 transcriptswere expressed at higher levels both in HGIN and EGC.A characteristic gene,G0/G1 switch 2(G0S2)was one of the 289 transcripts and related to metabolism,the immune response,and the NF-κB cascade,and its expression was validated in independent samples through real-time TaqManPCR and immunohistochemical staining.In real-time PCR analysis,the expression of G0S2 was elevated both in HGIN and EGC compared with that in LGIN(P<0.01 and P<0.001,respectively).In IHC analysis,G0S2 immunoreactivity was detected in the cytoplasmic of neoplastic cells,but was undetectable in chronic gastritis cells.The G0S2 expression in HGIN was higher than that of LGIN(P=0.012,χ2=6.28)and EGC(P=0.008,χ2=6.94).CONCLUSION:A clear biological distinction between gastric high-and low-grade intraepithelial neoplasia was identified,and provides molecular evidence for clinical application.
文摘According to the requirement of the project 'Establishment of the Physical Model of Earthquake PrecursorFields',this paper elucidates the train of thinking for research on the project and some scientific problems whichmust be studied i, the elucidation emphasizes that the core of this project is to study the conditions and processesof the generation of strong earthquakes. The paper first outlines the origin and development of the'strong-bodyearthquake-generating model' proposed by the author in the 1980;and then proves the reasonableness of themodel from three aspects, namely: deep structures, mechanical analysis and rock fracture experiments. Bystudying the tomographic image for the northern part of North China, it can be seen that the sources of strongearthquakes are all distributed in high-velocity bodies,or in the contact zone between high-velocity and lowvelocity bodies but nearer to the high-velocity body. It has been affirmed through studies of the mechanical modelsof hard and soft inclusions that the existence of a hard inclusion is an imPOrtant condition for the high concentration of large amounts of strain energy. A lot of theoretical and experimental studies have been made to investigate the conditions for rock instability; the results have consistently indicated that rock instability,sudden fracture and stress drop would be possible only if the stiffness of the source body is greater than the environmentalstiffness.
