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Prescreening of large-effect markers with multiple strategies improves the accuracy of genomic prediction
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作者 Keanning Li Bingxing An +11 位作者 Mang Liang Tianpeng Chang Tianyu Deng Lili Du Sheng Cao Yueying Du Hongyan Li Lingyang Xu Lupei Zhang Xue Gao Junya LI Huijiang Gao 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2024年第5期1634-1643,共10页
Presently,integrating multi-omics information into a prediction model has become a ameliorate strategy for genomic selection to improve genomic prediction accuracy.Here,we set the genomic and transcriptomic data as th... Presently,integrating multi-omics information into a prediction model has become a ameliorate strategy for genomic selection to improve genomic prediction accuracy.Here,we set the genomic and transcriptomic data as the training population data,using BSLMM,TWAS,and eQTL mapping to prescreen features according to |β_(b)|>0,top 1%of phenotypic variation explained(PVE),expression-associated single nucleotide polymorphisms(eSNPs),and egenes(false discovery rate(FDR)<0.01),where these loci were set as extra fixed effects(named GBLUP-Fix)and random effects(GFBLUP)to improve the prediction accuracy in the validation population,respectively.The results suggested that both GBLUP-Fix and GFBLUP models could improve the accuracy of longissimus dorsi muscle(LDM),water holding capacity(WHC),shear force(SF),and pH in Huaxi cattle on average from 2.14 to 8.69%,especially the improvement of GFBLUP-TWAS over GBLUP was 13.66%for SF.These methods also captured more genetic variance than GBLUP.Our study confirmed that multi-omics-assisted large-effects loci prescreening could improve the accuracyofgenomic prediction. 展开更多
关键词 multi-omics data features prescreening eQTL mapping Huaxi cattle genomic selection
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Application of Landscape Plants in the Huaxi National Urban Wetland Park 被引量:4
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作者 WANG Jian WANG Xiurong +2 位作者 SUN Su TAN Li LIU Hongyu 《Journal of Landscape Research》 2017年第2期103-106,112,共5页
The current situation of plants in Shilihe Beach of the Huaxi National Urban Wetland Park was investigated and analyzed. The results show that there are about 181 species of landscape plants in this park, of which arb... The current situation of plants in Shilihe Beach of the Huaxi National Urban Wetland Park was investigated and analyzed. The results show that there are about 181 species of landscape plants in this park, of which arbors and shrubs are dominant. Various species of plants grow differently because of different types of artificial maintenance. The overall partition of the wetland park dose not follow the features of a river-type wetland and is not clear. In this park, the planting area of hygrophyte is far less than that of terrestrial plants. As a result, the wetland park is evolving into a public garden. It is suggested that the overall design of the park should be conducted in accordance with site characteristics and resources, and the park should be developed and built reasonably based on the principle that the ecology is a priority. 展开更多
关键词 Urban wetland park PLANTS Investigation and analysis Huaxi
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Planting Adaptability of Brassica napobrassica cv. Huaxi Under Economic Fruit Forest
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作者 Qiong MOU Chengjiang PEI +4 位作者 Jiahai WU Yousong WU Juan LI Kongzhen LENG Weinan RAN 《Agricultural Biotechnology》 CAS 2019年第1期152-155,共4页
The growth speed,fresh grass yield,nutritional components,soil nutrient variation and economic benefit of Brassica napobrassica cv. Huaxi under different planting patterns( drilling,hole sowing and seedling transplant... The growth speed,fresh grass yield,nutritional components,soil nutrient variation and economic benefit of Brassica napobrassica cv. Huaxi under different planting patterns( drilling,hole sowing and seedling transplanting) were analyzed by a test of interplanting B. napobrassica cv. Huaxi under economic fruit forest,to solve the contradiction between food and feed during rapid development of ecological animal husbandry and improve land utilization rate. The comprehensive performance of B. napobrassica cv. Huaxi was good under the three planting patterns,and the comprehensive performance of B. napobrassica cv. Huaxi under the seedling transplanting pattern was the best among the three planting patterns. The fresh grass yield and net profit of B. napobrassica cv. Huaxi under the seedling transplanting pattern can reach 125 580. 0 kg/hm^2 and 16 674. 0 Yuan/hm^2,respectively. Interplanting B. napobrassica cv. Huaxi under economic fruit forest can improve soil physical and chemical properties,increase soil nutrients and inhibit weed growth. 展开更多
关键词 BRASSICA napobrassica cv.Huaxi Economic FRUIT forest PLANTING pattern PASTURE
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NYIMA SICHUL:BUILDING A “HUAXI DREAM” IN TIBET
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作者 Zhang Qingdan 《China's Tibet》 2018年第1期58-63,共6页
The weather has turned warm,the pastures green,and Nyima Sichul is busy again.He can be seen in every corner of the village,building irrigation canals and roads,tending to elderly people with no family,and providing I... The weather has turned warm,the pastures green,and Nyima Sichul is busy again.He can be seen in every corner of the village,building irrigation canals and roads,tending to elderly people with no family,and providing I employment services.The villagers come to him with all kinds of issues,and he always goes out of his way to help them,and bears responsibility without grudge.Not only that,he has worked out ways to bring in more income for 展开更多
关键词 HUAXI DREAM IN TIBET NYIMA SICHUL:BUILDING A
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