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Quantitative Structure-Activity Relationship Study of a Benzimidazole-Derived Series Inhibiting Mycobacterium tuberculosis H37Rv
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作者 Georges Stéphane Dembélé Mamadou Guy-Richard Koné +2 位作者 Fandia Konate Doh Soro Nahossé Ziao 《Computational Chemistry》 2022年第2期71-96,共26页
This work was carried out on a series of twenty-two (22) benzimidazole derivatives with inhibitory activities against Mycobacterium tuberculosis H37Rv by applying the Quantitative Structure-Activity Relationship (QSAR... This work was carried out on a series of twenty-two (22) benzimidazole derivatives with inhibitory activities against Mycobacterium tuberculosis H37Rv by applying the Quantitative Structure-Activity Relationship (QSAR) method. The molecules were optimized at the level DFT/B3LYP/6-31 + G (d, p), to obtain the molecular descriptors. We used three statistical learning tools namely, the linear multiple regression (LMR) method, the nonlinear regression (NLMR) and the artificial neural network (ANN) method. These methods allowed us to obtain three (3) quantitative models from the quantum descriptors that are, chemical potential (μ), polarizability (α), bond length l (C = N), and lipophilicity. These models showed good statistical performance. Among these, the ANN has a significantly better predictive ability R<sup>2</sup> = 0.9995;RMSE = 0.0149;F = 31879.0548. The external validation tests verify all the criteria of Tropsha et al. and Roy et al. Also, the internal validation tests show that the model has a very satisfactory internal predictive character and can be considered as robust. Moreover, the applicability range of this model determined from the levers shows that a prediction of the pMIC of the new benzimidazole derivatives is acceptable when its lever value is lower than 1. 展开更多
关键词 mycobacterium tuberculosis h37rv Benzimidazole Derivatives QSAr ANN Applicability Domain
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结核分枝杆菌培养物不同组份蛋白质组研究 被引量:11
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作者 庄玉辉 何秀云 +3 位作者 张小刚 李国利 阙海萍 刘绍军 《微生物学报》 CAS CSCD 北大核心 2002年第3期275-280,T001,共7页
将结核分枝杆菌H3 7RV株在苏通培养基内 ,3 7℃培养 2 1d ,然后将培养物分成上清液(A)、细胞浆 (B)和细胞膜 (C)蛋白质样品。以pH3 0~ 1 0 0的IPG预制胶条等电聚焦电泳为第一向 ,SDS PAGE为第二向进行双向电泳 (2 DE)、银染。经扫... 将结核分枝杆菌H3 7RV株在苏通培养基内 ,3 7℃培养 2 1d ,然后将培养物分成上清液(A)、细胞浆 (B)和细胞膜 (C)蛋白质样品。以pH3 0~ 1 0 0的IPG预制胶条等电聚焦电泳为第一向 ,SDS PAGE为第二向进行双向电泳 (2 DE)、银染。经扫描、计算机处理。A组份的部分蛋白质斑点采用质谱仪进行蛋白质鉴定。A、B和C 3个组份蛋白质斑点总数分别为 90 7、884和 6 81 ;3个组份蛋白质分子量分布基本相似 ,约 70 5 %~ 74 4%在 1 0~ 49kD之间 ;蛋白质等电点 (pH)A、B两组份分布基本相似 ,约 80 9%~ 83 5 %在pH3 0~ 6 4之间 ,而C组份pH7 6~ 1 0 0之间的蛋白质斑点数比A和B两组分略多 ;A、B和C 3个组份表达丰度较高的蛋白质斑点数占各组蛋白质斑点总数的比例分别为 7 8%、2 7 4%和 2 8% ,蛋白质等电点90 0 %均分布在pH3 0~ 6 4范围内。B组份蛋白质分子质量 73 1 %分布在 1 0~ 49kD之间 ,比A、B两组份略高。A组份 1 4个蛋白质斑点经肽质量指纹谱分析 ,其中 ,9个点有同源性的或推测的蛋白质功能 ,5个蛋白质功能不清楚。总之 ,初步获得了结核分枝杆菌H3 7RV株在上述体外培养条件下收获的培养物的上清液、细胞浆、细胞膜蛋白质组 2 DE图谱及其特点 。 展开更多
关键词 结核分枝杆菌 培养物 组份 蛋白质组
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