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Effects of IκBα and its mutants on NF-κB and p53 signaling pathways 被引量:3
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作者 Xian Li Da Xing +5 位作者 Ju Wang De-Bin Zhu Lan Zhang Xiao-Jia Chen Fen-Yong Sun An Hong 《World Journal of Gastroenterology》 SCIE CAS CSCD 2006年第41期6658-6664,共7页
AIM: To study the effects of IκBα and its mutants (IκBαM, IκBα3N, IκBαM44C) on NF-κB, p53 and their downstream target genes. The relationship of NF-κB, p53, and IκBα was further discussed. METHODS: pEC... AIM: To study the effects of IκBα and its mutants (IκBαM, IκBα3N, IκBαM44C) on NF-κB, p53 and their downstream target genes. The relationship of NF-κB, p53, and IκBα was further discussed. METHODS: pECFP-IκBα, pECFP-IκBαM (amino acides 1-317, Ser32, 36A), pECFP-IκBα243N (amino acides 1-243), pECFP-IκBα244C (amino acides 24±317), pEYFP-p65 and pp53-DsRed were constructed and transfected to ASTC-α-1 cells. Cells were transfected with pECFP-Cl as a control. 30 h after the transfection, location patterns of NF-κB, p53 and IκBα(IκBαM, IκBα243N, IκBα224C) were observed by a laser scanning microscope (LSM510/ConfoCor2, Zeiss). RNA extraction and reverse transcription were performed in cells transfected or co-transfected with different plasmids. Effects of IκBα and its mutants on the transprition level of NF-κB, NF-κB downstream target gene TNF-α, p53 and p53 downstream target gene Bax were observed by real time QT-PCR. In all experiments β-actin was reference. Results are expressed as the target/reference ratio of the sample divided by the target/reference ratio of the control. Different transfected cells were incubated with CCK-8 for 2 h in the incubator. Then the absorbance at 450 nm was measured by using a microplate reader. RESULTS: Cells that were transfected with p53- DsRed revealed a predominant nuclear localization. YFP-p65 mainly existed in the cytoplasm. Cells were transfected with CFP-IκBα, CFP-IκBαM, and CFP-IκBα243N respectively and revealed a predominant cytosolic localization. However, cells transfected of CFP-IκBα244C revealed a predominant nuclear localization. The rnRNA levels of p65, TNF-α, p53 and Bax in CFP-IκBα transfected cells did not change significantly, while in YFP-p65/CFP-IκBα co-transfected cells, IκBα decreased the transcription of p65 downstream gene TNF-α (2.24 ± 0.503) compared with the YFP-p65/ CFP-C1 co-transfected cells (5.08 ± 0.891) (P 〈 0.05). Phosphorylation defective IκBα (IκBαM) decreased the transcription levels of all the four genes compared with the control (P 〈 0.05). The N terminus of IκBα(IκBα243N) increased the transcription of NF-κB (1.84 ± 0.176) and TNF-α (1.51 ± 0.203) a little bit. However, the C terminus of IκBα(IκBα244C) increased the transcription of NF-κB, TNF-α, p53 and Bax significantly (8.29 ± 1.662, 14.16 ± 2.121, 10.2 ± 0.621, 3.72 ± 0.346) (P 〈 0.05). The CCK-8 experiment also showed that IκBα244C and p53 synergistically mediate apoptosis. CONCLUSIONS: IκBα and its mutants (IκBαM, IκBα243N, IκBαM244C) have different effects on NF- KB and p53 signaling pathways, according to their different structures. IκBαbounds with NF-KB and p53 in cytoplasm steadily, and inhibits both of the two signaling pathways, p53 and IκBα244C may be co-factor in inducing apoptosis. The C terminal of IκBαnhanced cell death, which suggests that it may be a pro-apoptotic protein existed in cells. 展开更多
关键词 Nuclear factor-κb inhibitor of nf-κb alpha P53 Real-time QT-PCR
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整合多数据库分析NFKBIA在SKCM预后和免疫浸润中的价值 被引量:1
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作者 杨珺涵 徐刚林 +2 位作者 柳梦婷 黄谢平 杨珮珮 《中国肿瘤生物治疗杂志》 CAS CSCD 北大核心 2023年第1期55-61,共7页
目的:探讨核因子κB抑制因子a(NFKBIA)表达与皮肤黑色素瘤(SKCM)患者预后及其与肿瘤微环境免疫浸润的相关性。方法:利用GEPIA2数据库分析正常皮肤和SKCM组织中NFKBIA的表达差异,GEPIA2和Ualcan数据库分析NFKBIA与SKCM预后关系,TIMER和TI... 目的:探讨核因子κB抑制因子a(NFKBIA)表达与皮肤黑色素瘤(SKCM)患者预后及其与肿瘤微环境免疫浸润的相关性。方法:利用GEPIA2数据库分析正常皮肤和SKCM组织中NFKBIA的表达差异,GEPIA2和Ualcan数据库分析NFKBIA与SKCM预后关系,TIMER和TISIDB数据库分析NFKBIA与SKCM中TIL和免疫调节基因的关系。选用TISCH和CancerSEA数据库从单细胞水平分析NFKBIA与SKCM细胞亚群及其相关的功能状态关联性。选取湖北省荆门市第二人民医院保存的14例SKCM患者的石蜡组织标本,通过免疫组织化学染色法验证SKCM组织和癌旁组织中NFKBIA蛋白的表达水平。结果:NFKBIA在SKCM组织中呈低表达,并且低表达的SKCM患者预后差(P<0.05)。NFKBIA表达与B细胞、CD8+T细胞、CD4+T细胞、巨噬细胞、中性粒细胞和DC浸润水平呈正相关关系(均P<0.01)。NFKBIA表达与SKCM中TIL丰度和免疫调节基因呈正相关关系(均P<0.01)。NFKBIA在SKCM单细胞免疫细胞中表达,且与肿瘤微环境中细胞分化和炎症呈正相关关系(R=0.28、0.23,均P<0.05)。免疫组织化学染色结果证实,NFKBIA蛋白在SKCM组织中阳性表达率显著低于癌旁组织(35.71%vs 85.71%,P<0.05)。结论:NFKBIA在SKCM组织中呈低表达,与SKCM免疫细胞浸润相关,可作为SKCM预后的标志物及治疗靶点。 展开更多
关键词 皮肤黑色素瘤 核因子κb抑制因子α 肿瘤浸润淋巴细胞 预后
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高通量测序分析肝移植急性排斥反应相关基因单核苷酸多态性位点的突变
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作者 鲍远大 易述红 《器官移植》 CAS CSCD 北大核心 2018年第3期205-210,共6页
目的利用高通量测序分析肝移植术后急性排斥反应相关度最高的基因单核苷酸多态性(SNP)位点的突变情况。方法收集同种异体原位肝移植术的68例受体外周血样本,根据有否发生急性排斥反应分为急性排斥组(13例)和非排斥组(55例)。通过查阅文... 目的利用高通量测序分析肝移植术后急性排斥反应相关度最高的基因单核苷酸多态性(SNP)位点的突变情况。方法收集同种异体原位肝移植术的68例受体外周血样本,根据有否发生急性排斥反应分为急性排斥组(13例)和非排斥组(55例)。通过查阅文献,最终确定与排斥反应发生相关的44个SNP突变位点。以44个SNP位点作为检测靶点,用高通量测序分析对两组受体外周血样本进行检测,经生物信息学分析出与急性排斥反应发生相关基因SNP位点的突变率。结果急性排斥组中的白细胞介素(IL)-10 TT基因型、T等位基因、AA基因型、A等位基因的SNP位点突变率明显高于非排斥组;急性排斥组中的细胞趋化因子受体(CCR)5AG基因型的SNP位点突变率明显低于非排斥组,CCR5 GG基因型的SNP位点突变率明显高于非排斥组;急性排斥组中的IL-4 CT基因型的SNP位点突变率明显高于非排斥组,IL-4 TT基因型的SNP位点突变率明显低于非排斥组;急性排斥组中核因子-κB抑制因子α(NF-κBIA)C等位基因的SNP位点突变率明显高于非排斥组;急性排斥组中维生素D受体(VDR)CC基因型和C等位基因的SNP位点突变率明显低于非排斥组,差异均有统计学意义(均为P<0.05)。结论高通量测序分析发现肝移植术后急性排斥反应相关基因中,其SNP位点突变率较高的包括IL-10 TT基因型、T等位基因、AA基因型、A等位基因,CCR5 GG基因型、AG基因型,IL-4 CT基因型、TT基因型,NF-κBIA C等位基因,VDR CC基因型和C等位基因。 展开更多
关键词 肝移植 急性排斥反应 高通量测序 单核苷酸多态性(SNP) 白细胞介素 细胞趋化因子受体 核因子-κb抑制因子α 维生素D受体 基因突变
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