In this paper we present a novel method for dividing and clustering large volumetric scalar out-of-core datasets. This work is based on the Ordered Cluster Binary Tree (OCBT) structure created using a top-down or divi...In this paper we present a novel method for dividing and clustering large volumetric scalar out-of-core datasets. This work is based on the Ordered Cluster Binary Tree (OCBT) structure created using a top-down or divisive clustering method. The OCBT structure allows fast and efficient sub volume queries to be made in combination with level of detail (LOD) queries of the tree. The initial partitioning of the large out-of-core dataset is done by using non-axis aligned planes calculated using Principal Component Analysis (PCA). A hybrid OCBT structure is also proposed where an in-core cluster binary tree is combined with a large out-of-core file.展开更多
The aim of this study is to create a fast and stable iterative technique for numerical solution of a quasi-linear elliptic pressure equation. We developed a modified version of the Anderson acceleration(AA)algorithm t...The aim of this study is to create a fast and stable iterative technique for numerical solution of a quasi-linear elliptic pressure equation. We developed a modified version of the Anderson acceleration(AA)algorithm to fixed-point(FP) iteration method. It computes the approximation to the solutions at each iteration based on the history of vectors in extended space, which includes the vector of unknowns, the discrete form of the operator, and the equation's right-hand side. Several constraints are applied to AA algorithm, including a limitation of the time step variation during the iteration process, which allows switching to the base FP iterations to maintain convergence. Compared to the base FP algorithm, the improved version of the AA algorithm enables a reliable and rapid convergence of the iterative solution for the quasi-linear elliptic pressure equation describing the flow of particle-laden yield-stress fluids in a narrow channel during hydraulic fracturing, a key technology for stimulating hydrocarbon-bearing reservoirs. In particular, the proposed AA algorithm allows for faster computations and resolution of unyielding zones in hydraulic fractures that cannot be calculated using the FP algorithm. The quasi-linear elliptic pressure equation under consideration describes various physical processes, such as the displacement of fluids with viscoplastic rheology in a narrow cylindrical annulus during well cementing,the displacement of cross-linked gel in a proppant pack filling hydraulic fractures during the early stage of well production(fracture flowback), and multiphase filtration in a rock formation. We estimate computational complexity of the developed algorithm as compared to Jacobian-based algorithms and show that the performance of the former one is higher in modelling of flows of viscoplastic fluids. We believe that the developed algorithm is a useful numerical tool that can be implemented in commercial simulators to obtain fast and converged solutions to the non-linear problems described above.展开更多
The thermal evolution of the Earth’s interior and its dynamic effects are the focus of Earth sciences.However,the commonly adopted grid-based temperature solver is usually prone to numerical oscillations,especially i...The thermal evolution of the Earth’s interior and its dynamic effects are the focus of Earth sciences.However,the commonly adopted grid-based temperature solver is usually prone to numerical oscillations,especially in the presence of sharp thermal gradients,such as when modeling subducting slabs and rising plumes.This phenomenon prohibits the correct representation of thermal evolution and may cause incorrect implications of geodynamic processes.After examining several approaches for removing these numerical oscillations,we show that the Lagrangian method provides an ideal way to solve this problem.In this study,we propose a particle-in-cell method as a strategy for improving the solution to the energy equation and demonstrate its effectiveness in both one-dimensional and three-dimensional thermal problems,as well as in a global spherical simulation with data assimilation.We have implemented this method in the open-source finite-element code CitcomS,which features a spherical coordinate system,distributed memory parallel computing,and data assimilation algorithms.展开更多
以Aspen Open Solver接口集中的非线性代数方程组(NLA)部分作为研究对象,在对接口集进行系统地分析之后,利用AspenTech提供的接口代码将分别基于梯度和非基于梯度的四种求解算法嵌入生成solver组件,并实现用Aspen Plus调用该solver组件...以Aspen Open Solver接口集中的非线性代数方程组(NLA)部分作为研究对象,在对接口集进行系统地分析之后,利用AspenTech提供的接口代码将分别基于梯度和非基于梯度的四种求解算法嵌入生成solver组件,并实现用Aspen Plus调用该solver组件观察各种算法嵌入的结果。展开更多
In this paper,a wave generating approach for long-crest irregular waves in a numerical tank by our in-house solver naoe-FOAM-SJTU is presented.The naoe-FOAM-SJTU solver is developed using an open source tool kit,Open ...In this paper,a wave generating approach for long-crest irregular waves in a numerical tank by our in-house solver naoe-FOAM-SJTU is presented.The naoe-FOAM-SJTU solver is developed using an open source tool kit,Open FOAM.Reynolds-averaged Navier?Stokes(RANS) equations are chosen as governing equations and the volume of fluid(VOF) is employed to capture the two phases interface.Incoming wave group is generated by imposing the boundary conditions of the tank inlet.A spectrum based correction procedure is developed to make the measured spectrum approaching to the target spectrum.This procedure can automatically adjust the wave generation signal based on the measured wave elevation by wave height probe in numerical wave tank.After 3 to 4 iterations,the measured spectrum agrees well with the target one.In order to validate this method,several wave spectra are chosen and validated in the numerical wave tank,with comparison between the final measured and target spectra.In order to investigate a practical situation,a modified Wigley hull is placed in the wave tank with incoming irregular waves.The wave-induced heave and pitch motions are treated by Fourier analysis to obtain motion responses,showing good agreements with the measurements.展开更多
A lattice Boltzmann flux solver(LBFS)is presented for simulation of fluid flows.Like the conventional computational fluid dynamics(CFD)solvers,the new solver also applies the finite volume method to discretize the gov...A lattice Boltzmann flux solver(LBFS)is presented for simulation of fluid flows.Like the conventional computational fluid dynamics(CFD)solvers,the new solver also applies the finite volume method to discretize the governing differential equations,but the numerical flux at the cell interface is not evaluated by the smooth function approximation or Riemann solvers.Instead,it is evaluated from local solution of lattice Boltzmann equation(LBE)at cell interface.Two versions of LBFS are presented in this paper.One is to locally apply one-dimensional compressible lattice Boltzmann(LB)model along the normal direction to the cell interface for simulation of compressible inviscid flows with shock waves.The other is to locally apply multi-dimensional LB model at cell interface for simulation of incompressible viscous and inviscid flows.The present solver removes the drawbacks of conventional lattice Boltzmann method(LBM)such as limitation to uniform mesh,tie-up of mesh spacing and time interval,limitation to viscous flows.Numerical examples show that the present solver can be well applied to simulate fluid flows with non-uniform mesh and curved boundary.展开更多
The elliptic mild slope equation is used to simulate linear wave propagation over variable sea bed topography with mild slopes. The governing equation is discretized by the finite difference method. Based on the BI-CG...The elliptic mild slope equation is used to simulate linear wave propagation over variable sea bed topography with mild slopes. The governing equation is discretized by the finite difference method. Based on the BI-CGSTAB technique, an attractive variant bf BI-Conjugate Gradients (BI-CG) method, the obtained linear algebraic system of equations is solved. Numerical experiments show that the BI-CGSTAB method is efficient for solving the elliptic mild slope equation. The results obtained by the BI-CGSTAB-Based method are much the same as those obtained by other authors with different solution methods, but the convergence rate is much faster than that of other methods.展开更多
Simulation of solitary wave run-up on a vertical circular cylinder is carried out in a viscous numerical wave tank developed based on the open source codes Open FOAM. An incompressible two-phase flow solver naoe-FOAM-...Simulation of solitary wave run-up on a vertical circular cylinder is carried out in a viscous numerical wave tank developed based on the open source codes Open FOAM. An incompressible two-phase flow solver naoe-FOAM-SJTU is used to solve the Reynolds-Averaged Navier–Stokes(RANS) equations with the SST k ?? turbulence model. The PISO algorithm is utilized for the pressure-velocity coupling. The air-water interface is captured via Volume of Fluid(VOF) technique. The present numerical model is validated by simulating the solitary wave run-up and reflected against a vertical wall, and solitary wave run-up on a vertical circular cylinder. Comparisons between numerical results and available experimental data show satisfactory agreement. Furthermore, simulations are carried out to study the solitary wave run-up on the cylinder with different incident wave height H and different cylinder radius a. The relationships of the wave run-up height with the incident wave height H, cylinder radius a are analyzed. The evolutions of the scattering free surface and vortex shedding are also presented to give a better understanding of the process of nonlinear wave-cylinder interaction.展开更多
A Harten-Lax-van Leer-contact (HLLC) approximate Riemann solver is built with elastic waves (HLLCE) for one-dimensional elastic-plastic flows with a hypo- elastic constitutive model and the von Mises' yielding cr...A Harten-Lax-van Leer-contact (HLLC) approximate Riemann solver is built with elastic waves (HLLCE) for one-dimensional elastic-plastic flows with a hypo- elastic constitutive model and the von Mises' yielding criterion. Based on the HLLCE, a third-order cell-centered Lagrangian scheme is built for one-dimensional elastic-plastic problems. A number of numerical experiments are carried out. The numerical results show that the proposed third-order scheme achieves the desired order of accuracy. The third-order scheme is used to the numerical solution of the problems with elastic shock waves and elastic rarefaction waves. The numerical results are compared with a reference solution and the results obtained by other authors. The comparison shows that the pre- sented high-order scheme is convergent, stable, and essentially non-oscillatory. Moreover, the HLLCE is more efficient than the two-rarefaction Riemann solver with elastic waves (TRRSE)展开更多
In this paper,the finite difference weighted essentially non-oscillatory (WENO) scheme is incorporated into the recently developed four kinds of lattice Boltzmann flux solver (LBFS) to simulate compressible flows,incl...In this paper,the finite difference weighted essentially non-oscillatory (WENO) scheme is incorporated into the recently developed four kinds of lattice Boltzmann flux solver (LBFS) to simulate compressible flows,including inviscid LBFS Ⅰ,viscous LBFS Ⅱ,hybrid LBFS Ⅲ and hybrid LBFS Ⅳ.Hybrid LBFS can automatically realize the switch between inviscid LBFS Ⅰ and viscous LBFS Ⅱ through introducing a switch function.The resultant hybrid WENO-LBFS scheme absorbs the advantages of WENO scheme and hybrid LBFS.We investigate the performance of WENO scheme based on four kinds of LBFS systematically.Numerical results indicate that the devopled hybrid WENO-LBFS scheme has high accuracy,high resolution and no oscillations.It can not only accurately calculate smooth solutions,but also can effectively capture contact discontinuities and strong shock waves.展开更多
Inspired by the recently proposed Legendre orthogonal polynomial representation for imaginary-time Green s functions G(τ),we develop an alternate and superior representation for G(τ) and implement it in the hybr...Inspired by the recently proposed Legendre orthogonal polynomial representation for imaginary-time Green s functions G(τ),we develop an alternate and superior representation for G(τ) and implement it in the hybridization expansion continuous-time quantum Monte Carlo impurity solver.This representation is based on the kernel polynomial method,which introduces some integral kernel functions to filter the numerical fluctuations caused by the explicit truncations of polynomial expansion series and can improve the computational precision significantly.As an illustration of the new representation,we re-examine the imaginary-time Green's functions of the single-band Hubbard model in the framework of dynamical mean-field theory.The calculated results suggest that with carefully chosen integral kernel functions,whether the system is metallic or insulating,the Gibbs oscillations found in the previous Legendre orthogonal polynomial representation have been vastly suppressed and remarkable corrections to the measured Green's functions have been obtained.展开更多
This paper proposes an impurity solver for the dynamical mean field theory (DMFT) study of the Mott insulators, which is based on the second order perturbation of the hybridization function. After careful benchmarki...This paper proposes an impurity solver for the dynamical mean field theory (DMFT) study of the Mott insulators, which is based on the second order perturbation of the hybridization function. After careful benchmarking with quantum Monte Carlo results on the anti-ferromagnetic phase of the Hubbard model, it concludes that this impurity solver can capture the main physical features in the strong coupling regime and can be a very useful tool for the LDA (local density approximation) + DMFT studies of the Mort insulators with long range order.展开更多
文摘In this paper we present a novel method for dividing and clustering large volumetric scalar out-of-core datasets. This work is based on the Ordered Cluster Binary Tree (OCBT) structure created using a top-down or divisive clustering method. The OCBT structure allows fast and efficient sub volume queries to be made in combination with level of detail (LOD) queries of the tree. The initial partitioning of the large out-of-core dataset is done by using non-axis aligned planes calculated using Principal Component Analysis (PCA). A hybrid OCBT structure is also proposed where an in-core cluster binary tree is combined with a large out-of-core file.
基金partial financial support from Gazpromneft Science and Technology Center。
文摘The aim of this study is to create a fast and stable iterative technique for numerical solution of a quasi-linear elliptic pressure equation. We developed a modified version of the Anderson acceleration(AA)algorithm to fixed-point(FP) iteration method. It computes the approximation to the solutions at each iteration based on the history of vectors in extended space, which includes the vector of unknowns, the discrete form of the operator, and the equation's right-hand side. Several constraints are applied to AA algorithm, including a limitation of the time step variation during the iteration process, which allows switching to the base FP iterations to maintain convergence. Compared to the base FP algorithm, the improved version of the AA algorithm enables a reliable and rapid convergence of the iterative solution for the quasi-linear elliptic pressure equation describing the flow of particle-laden yield-stress fluids in a narrow channel during hydraulic fracturing, a key technology for stimulating hydrocarbon-bearing reservoirs. In particular, the proposed AA algorithm allows for faster computations and resolution of unyielding zones in hydraulic fractures that cannot be calculated using the FP algorithm. The quasi-linear elliptic pressure equation under consideration describes various physical processes, such as the displacement of fluids with viscoplastic rheology in a narrow cylindrical annulus during well cementing,the displacement of cross-linked gel in a proppant pack filling hydraulic fractures during the early stage of well production(fracture flowback), and multiphase filtration in a rock formation. We estimate computational complexity of the developed algorithm as compared to Jacobian-based algorithms and show that the performance of the former one is higher in modelling of flows of viscoplastic fluids. We believe that the developed algorithm is a useful numerical tool that can be implemented in commercial simulators to obtain fast and converged solutions to the non-linear problems described above.
基金the National Supercomputer Center in Tianjin for their patient assistance in providing the compilation environment.We thank the editor,Huajian Yao,for handling the manuscript and Mingming Li and another anonymous reviewer for their constructive comments.The research leading to these results has received funding from National Natural Science Foundation of China projects(Grant Nos.92355302 and 42121005)Taishan Scholar projects(Grant No.tspd20210305)others(Grant Nos.XDB0710000,L2324203,XK2023DXC001,LSKJ202204400,and ZR2021ZD09).
文摘The thermal evolution of the Earth’s interior and its dynamic effects are the focus of Earth sciences.However,the commonly adopted grid-based temperature solver is usually prone to numerical oscillations,especially in the presence of sharp thermal gradients,such as when modeling subducting slabs and rising plumes.This phenomenon prohibits the correct representation of thermal evolution and may cause incorrect implications of geodynamic processes.After examining several approaches for removing these numerical oscillations,we show that the Lagrangian method provides an ideal way to solve this problem.In this study,we propose a particle-in-cell method as a strategy for improving the solution to the energy equation and demonstrate its effectiveness in both one-dimensional and three-dimensional thermal problems,as well as in a global spherical simulation with data assimilation.We have implemented this method in the open-source finite-element code CitcomS,which features a spherical coordinate system,distributed memory parallel computing,and data assimilation algorithms.
基金financially supported by National Natural Science Foundation of China(Grant Nos.51379125,51411130131,11432009,and 51490675)the Chang Jiang Scholars Program(Grant No.T2014099)+3 种基金the Innovative Special Project of Numerical Tank of Ministry of Industry and Information Technology of China(Grant No.2016-23)the Foundation of State key Laboratory of Ocean Engineering(Grant No.GKZD010065)the Program for Professor of Special Appointment(Eastern Scholar)at Shanghai Institutions of Higher Learning(Grant No.2013022)center for HPC at Shanghai Jiao Tong University,and Lloyd’s Register Foundation(LRF)
文摘In this paper,a wave generating approach for long-crest irregular waves in a numerical tank by our in-house solver naoe-FOAM-SJTU is presented.The naoe-FOAM-SJTU solver is developed using an open source tool kit,Open FOAM.Reynolds-averaged Navier?Stokes(RANS) equations are chosen as governing equations and the volume of fluid(VOF) is employed to capture the two phases interface.Incoming wave group is generated by imposing the boundary conditions of the tank inlet.A spectrum based correction procedure is developed to make the measured spectrum approaching to the target spectrum.This procedure can automatically adjust the wave generation signal based on the measured wave elevation by wave height probe in numerical wave tank.After 3 to 4 iterations,the measured spectrum agrees well with the target one.In order to validate this method,several wave spectra are chosen and validated in the numerical wave tank,with comparison between the final measured and target spectra.In order to investigate a practical situation,a modified Wigley hull is placed in the wave tank with incoming irregular waves.The wave-induced heave and pitch motions are treated by Fourier analysis to obtain motion responses,showing good agreements with the measurements.
基金Supported by the National Natural Science Foundation of China(11272153)
文摘A lattice Boltzmann flux solver(LBFS)is presented for simulation of fluid flows.Like the conventional computational fluid dynamics(CFD)solvers,the new solver also applies the finite volume method to discretize the governing differential equations,but the numerical flux at the cell interface is not evaluated by the smooth function approximation or Riemann solvers.Instead,it is evaluated from local solution of lattice Boltzmann equation(LBE)at cell interface.Two versions of LBFS are presented in this paper.One is to locally apply one-dimensional compressible lattice Boltzmann(LB)model along the normal direction to the cell interface for simulation of compressible inviscid flows with shock waves.The other is to locally apply multi-dimensional LB model at cell interface for simulation of incompressible viscous and inviscid flows.The present solver removes the drawbacks of conventional lattice Boltzmann method(LBM)such as limitation to uniform mesh,tie-up of mesh spacing and time interval,limitation to viscous flows.Numerical examples show that the present solver can be well applied to simulate fluid flows with non-uniform mesh and curved boundary.
基金National Natural Science Foundation of China under grant No.59839330China Postdoctoral Science Foundation
文摘The elliptic mild slope equation is used to simulate linear wave propagation over variable sea bed topography with mild slopes. The governing equation is discretized by the finite difference method. Based on the BI-CGSTAB technique, an attractive variant bf BI-Conjugate Gradients (BI-CG) method, the obtained linear algebraic system of equations is solved. Numerical experiments show that the BI-CGSTAB method is efficient for solving the elliptic mild slope equation. The results obtained by the BI-CGSTAB-Based method are much the same as those obtained by other authors with different solution methods, but the convergence rate is much faster than that of other methods.
基金financially supported by the National Natural Science Foundation of China(Grant Nos.51379125,51411130131,and 11432009)Program for Professor of Special Appointment(Eastern Scholar)at Shanghai Institutions of Higher Learning(Grant No.2013022)the National Basic Research Program of China(973 Program,Grant No.2013CB036103)
文摘Simulation of solitary wave run-up on a vertical circular cylinder is carried out in a viscous numerical wave tank developed based on the open source codes Open FOAM. An incompressible two-phase flow solver naoe-FOAM-SJTU is used to solve the Reynolds-Averaged Navier–Stokes(RANS) equations with the SST k ?? turbulence model. The PISO algorithm is utilized for the pressure-velocity coupling. The air-water interface is captured via Volume of Fluid(VOF) technique. The present numerical model is validated by simulating the solitary wave run-up and reflected against a vertical wall, and solitary wave run-up on a vertical circular cylinder. Comparisons between numerical results and available experimental data show satisfactory agreement. Furthermore, simulations are carried out to study the solitary wave run-up on the cylinder with different incident wave height H and different cylinder radius a. The relationships of the wave run-up height with the incident wave height H, cylinder radius a are analyzed. The evolutions of the scattering free surface and vortex shedding are also presented to give a better understanding of the process of nonlinear wave-cylinder interaction.
基金Project supported by the National Natural Science Foundation of China(Nos.11172050 and11672047)the Science and Technology Foundation of China Academy of Engineering Physics(No.2013A0202011)
文摘A Harten-Lax-van Leer-contact (HLLC) approximate Riemann solver is built with elastic waves (HLLCE) for one-dimensional elastic-plastic flows with a hypo- elastic constitutive model and the von Mises' yielding criterion. Based on the HLLCE, a third-order cell-centered Lagrangian scheme is built for one-dimensional elastic-plastic problems. A number of numerical experiments are carried out. The numerical results show that the proposed third-order scheme achieves the desired order of accuracy. The third-order scheme is used to the numerical solution of the problems with elastic shock waves and elastic rarefaction waves. The numerical results are compared with a reference solution and the results obtained by other authors. The comparison shows that the pre- sented high-order scheme is convergent, stable, and essentially non-oscillatory. Moreover, the HLLCE is more efficient than the two-rarefaction Riemann solver with elastic waves (TRRSE)
基金This study was supported by the National Natural Science Foundation of China(Grants 11372168,11772179).
文摘In this paper,the finite difference weighted essentially non-oscillatory (WENO) scheme is incorporated into the recently developed four kinds of lattice Boltzmann flux solver (LBFS) to simulate compressible flows,including inviscid LBFS Ⅰ,viscous LBFS Ⅱ,hybrid LBFS Ⅲ and hybrid LBFS Ⅳ.Hybrid LBFS can automatically realize the switch between inviscid LBFS Ⅰ and viscous LBFS Ⅱ through introducing a switch function.The resultant hybrid WENO-LBFS scheme absorbs the advantages of WENO scheme and hybrid LBFS.We investigate the performance of WENO scheme based on four kinds of LBFS systematically.Numerical results indicate that the devopled hybrid WENO-LBFS scheme has high accuracy,high resolution and no oscillations.It can not only accurately calculate smooth solutions,but also can effectively capture contact discontinuities and strong shock waves.
基金Project supported by the National Natural Science Foundation of China(Grant No.11504340)
文摘Inspired by the recently proposed Legendre orthogonal polynomial representation for imaginary-time Green s functions G(τ),we develop an alternate and superior representation for G(τ) and implement it in the hybridization expansion continuous-time quantum Monte Carlo impurity solver.This representation is based on the kernel polynomial method,which introduces some integral kernel functions to filter the numerical fluctuations caused by the explicit truncations of polynomial expansion series and can improve the computational precision significantly.As an illustration of the new representation,we re-examine the imaginary-time Green's functions of the single-band Hubbard model in the framework of dynamical mean-field theory.The calculated results suggest that with carefully chosen integral kernel functions,whether the system is metallic or insulating,the Gibbs oscillations found in the previous Legendre orthogonal polynomial representation have been vastly suppressed and remarkable corrections to the measured Green's functions have been obtained.
基金Project supported by the National Natural Science Foundation of China(Grant Nos.10334090,10425418,60576058)the National Basic Research Program of China(Grant No.2007CB925000)
文摘This paper proposes an impurity solver for the dynamical mean field theory (DMFT) study of the Mott insulators, which is based on the second order perturbation of the hybridization function. After careful benchmarking with quantum Monte Carlo results on the anti-ferromagnetic phase of the Hubbard model, it concludes that this impurity solver can capture the main physical features in the strong coupling regime and can be a very useful tool for the LDA (local density approximation) + DMFT studies of the Mort insulators with long range order.