In order to explore the nitrogen removal process in constructed wetlands(CW s),the moisture,ammonia nitrogen(NH4+-N),nitrate nitrogen(NO3"-N)and nitrification intensity in three wetland plant rhizosphere soils(Ac...In order to explore the nitrogen removal process in constructed wetlands(CW s),the moisture,ammonia nitrogen(NH4+-N),nitrate nitrogen(NO3"-N)and nitrification intensity in three wetland plant rhizosphere soils(Acorns calamus,Typha orientalis,Iris pseudacorus)were investigated at a relatively normal temperature range of15to25The relative abundance of ammonia-oxidizing bacteria(AOB)and ammonia-oxidizing archaea(AOA)were also achieved using fluorescence in situ hybridization(FISH).It is found that T.orientalis achieves the highest nitrification intensity of2.03m g(h?kg)while the second is I.pseudacorrs(1.74m g/(h?kg)),and followed by A.calamus(1.65m g/(h?kg))throughout the experiment.FISH reveals that the abundance of bacteria(1010g_1wet soil)is higher than that of archaea(109g_1wet soil),and AOBare the dominant bacteria in the ammonia oxidation process.The abundance of AOB in te rhizosphere soils from high to low T.orientalis(1.88x1010g"1),I pseudacorus(1.23x1010g1),A.calamus(5.07x109g"1)while the abundance of AOA from high to low ae I.pseudacorus(4.00x109g1),A.calamus(3.52x109g"1),T.orientalis(3.48x109g"1).The study provides valuable evidence of plant selection for nitrogen removal in CWs.展开更多
Positive associations between alpine cushion plants and other species have been extensively studied.However,almost all studies have focused on the associations between macrofauna.Studies that have investigated positiv...Positive associations between alpine cushion plants and other species have been extensively studied.However,almost all studies have focused on the associations between macrofauna.Studies that have investigated positive associations between alpine cushion plants and rhizospheric microbes have been limited to the vegetation growing season.Here,we asked whether the positive effects that alpine cushion plants confer on rhizospheric microbe communities vary with seasons.We assessed seasonal variations in the bacterial diversity and composition in rhizosphere of two alpine cushion plants and surrounding bare ground by employing a high throughput sequencing method targeting the V3 region of bacterial 16 S rRNA genes.Soil properties of the rhizosphere and the bare ground were also examined.We found that cushion rhizospheres harbored significantly more C,N,S,ammonia nitrogen,and soil moisture than the bare ground.Soil properties in cushion rhizospheres were not notably different,except for soil pH.Bacterial diversities within the same microhabitats did not vary significantly with seasons.We concluded that alpine cushion plants had positive effects on the rhizospheric bacterial communities,even though the strength of the effect varied in different cushion species.Cushion species and the soil sulfur content were probably the major factors driving the spatial distribution and structure of soil bacterial communities in the alpine communities dominated by cushion plants.展开更多
Microbe communities in rhizosphere ecosystems are important for plant health but there is limited knowledge of them in the rhizospheres of genetically modified（GM） plants, especial for tree species. We used the ampl...Microbe communities in rhizosphere ecosystems are important for plant health but there is limited knowledge of them in the rhizospheres of genetically modified（GM） plants, especial for tree species. We used the amplitude sequencing method to analyze the V4 regions of the 16 S r RNA gene to identify changes in bacterial diversity and community structure in two GM lines（D520 and D521）, one non-genetically modified（nonGM） line and in uncultivated soil. After chimera filtering,468.133 sequences in the domain Bacteria remained. There were ten dominant taxonomic groups（with [1 % of all sequences） across the samples. 241 of 551 genera（representing a ratio of 97.33 %） were common to all samples.A Venn diagram showed that 1.926 operational taxonomic units（OTUs） were shared by all samples. We found a specific change, a reduction in Chloroflexi, in the microorganisms in the rhizosphere soil planted with poplars. Taken together, the results showed few statistical differences in the bacterial diversity and community structure between the GM line and non-GM line, this suggests that there was no or very limited impact of this genetic modification on the bacterial communities in the rhizosphere.展开更多
Because of climate change and the highly growing world population,it becomes a huge challenge to feed the whole population.To overcome this challenge and increase the crop yield,a large number of fertilizers are appli...Because of climate change and the highly growing world population,it becomes a huge challenge to feed the whole population.To overcome this challenge and increase the crop yield,a large number of fertilizers are applied but these have many side effects.Instead of these,scientists have discovered beneficial rhizobacteria,which are environmentally friendly and may increase crop yield and plant growth.The microbial population of the rhizosphere shows a pivotal role in plant development by inducing its physiology.Plant depends upon the valuable interactions among the roots and microbes for the growth,nutrients availability,growth promotion,disease suppression and other important roles for plants.Recently numerous secrets of microbes in the rhizosphere have been revealed due to huge development in molecular and microscopic technologies.This review illustrated and discussed the current knowledge on the development,maintenance,interactions of rhizobacterial populations and various proposed mechanisms normally used by PGPR in the rhizosphere that encouraging the plant growth and alleviating the stress conditions.In addition,this research reviewed the role of single and combination of PGPR,mycorrhizal fungi in plant development and modulation of the stress as well as factors affecting the microbiome in the rhizosphere.展开更多
基金The National Natural Science Foundation of China(No.51479034,50909019)the Fundamental Research Funds for the Central Universities
文摘In order to explore the nitrogen removal process in constructed wetlands(CW s),the moisture,ammonia nitrogen(NH4+-N),nitrate nitrogen(NO3"-N)and nitrification intensity in three wetland plant rhizosphere soils(Acorns calamus,Typha orientalis,Iris pseudacorus)were investigated at a relatively normal temperature range of15to25The relative abundance of ammonia-oxidizing bacteria(AOB)and ammonia-oxidizing archaea(AOA)were also achieved using fluorescence in situ hybridization(FISH).It is found that T.orientalis achieves the highest nitrification intensity of2.03m g(h?kg)while the second is I.pseudacorrs(1.74m g/(h?kg)),and followed by A.calamus(1.65m g/(h?kg))throughout the experiment.FISH reveals that the abundance of bacteria(1010g_1wet soil)is higher than that of archaea(109g_1wet soil),and AOBare the dominant bacteria in the ammonia oxidation process.The abundance of AOB in te rhizosphere soils from high to low T.orientalis(1.88x1010g"1),I pseudacorus(1.23x1010g1),A.calamus(5.07x109g"1)while the abundance of AOA from high to low ae I.pseudacorus(4.00x109g1),A.calamus(3.52x109g"1),T.orientalis(3.48x109g"1).The study provides valuable evidence of plant selection for nitrogen removal in CWs.
基金supported by the National Key Research and Development Program of China(Grant No.2017YFC0505200,to Hang Sun)the Major Program of National Natural Science Foundation of China(Grant No.31590823,to Hang Sun)+2 种基金the Strategic Priority Research Program of Chinese Academy of Sciences(Grant No.XDA20050203,to Hang Sun)the Strategic Priority Research Program of the Chinese Academy of Sciences(Grant No.XDB15020302,to Jianqiang Su)the Yunnan Applied Basic Research Project(Grant No.2018FA015,to Yang Yang)
文摘Positive associations between alpine cushion plants and other species have been extensively studied.However,almost all studies have focused on the associations between macrofauna.Studies that have investigated positive associations between alpine cushion plants and rhizospheric microbes have been limited to the vegetation growing season.Here,we asked whether the positive effects that alpine cushion plants confer on rhizospheric microbe communities vary with seasons.We assessed seasonal variations in the bacterial diversity and composition in rhizosphere of two alpine cushion plants and surrounding bare ground by employing a high throughput sequencing method targeting the V3 region of bacterial 16 S rRNA genes.Soil properties of the rhizosphere and the bare ground were also examined.We found that cushion rhizospheres harbored significantly more C,N,S,ammonia nitrogen,and soil moisture than the bare ground.Soil properties in cushion rhizospheres were not notably different,except for soil pH.Bacterial diversities within the same microhabitats did not vary significantly with seasons.We concluded that alpine cushion plants had positive effects on the rhizospheric bacterial communities,even though the strength of the effect varied in different cushion species.Cushion species and the soil sulfur content were probably the major factors driving the spatial distribution and structure of soil bacterial communities in the alpine communities dominated by cushion plants.
基金financially supported by the National High-Tech Research and Development Program of China,863Program(Grant No.2011AA100201)the National Forestry Public Welfare Research Project of China(Grant No.201004004)
文摘Microbe communities in rhizosphere ecosystems are important for plant health but there is limited knowledge of them in the rhizospheres of genetically modified（GM） plants, especial for tree species. We used the amplitude sequencing method to analyze the V4 regions of the 16 S r RNA gene to identify changes in bacterial diversity and community structure in two GM lines（D520 and D521）, one non-genetically modified（nonGM） line and in uncultivated soil. After chimera filtering,468.133 sequences in the domain Bacteria remained. There were ten dominant taxonomic groups（with [1 % of all sequences） across the samples. 241 of 551 genera（representing a ratio of 97.33 %） were common to all samples.A Venn diagram showed that 1.926 operational taxonomic units（OTUs） were shared by all samples. We found a specific change, a reduction in Chloroflexi, in the microorganisms in the rhizosphere soil planted with poplars. Taken together, the results showed few statistical differences in the bacterial diversity and community structure between the GM line and non-GM line, this suggests that there was no or very limited impact of this genetic modification on the bacterial communities in the rhizosphere.
基金The authors acknowledge that this work was financially supported by the Fundamental Research Fund for the Central Universities of China(Project No.lzujbky-2017-k15).
文摘Because of climate change and the highly growing world population,it becomes a huge challenge to feed the whole population.To overcome this challenge and increase the crop yield,a large number of fertilizers are applied but these have many side effects.Instead of these,scientists have discovered beneficial rhizobacteria,which are environmentally friendly and may increase crop yield and plant growth.The microbial population of the rhizosphere shows a pivotal role in plant development by inducing its physiology.Plant depends upon the valuable interactions among the roots and microbes for the growth,nutrients availability,growth promotion,disease suppression and other important roles for plants.Recently numerous secrets of microbes in the rhizosphere have been revealed due to huge development in molecular and microscopic technologies.This review illustrated and discussed the current knowledge on the development,maintenance,interactions of rhizobacterial populations and various proposed mechanisms normally used by PGPR in the rhizosphere that encouraging the plant growth and alleviating the stress conditions.In addition,this research reviewed the role of single and combination of PGPR,mycorrhizal fungi in plant development and modulation of the stress as well as factors affecting the microbiome in the rhizosphere.
