Plasmid DNA Analysis of Pathogenic Escherichia coli in Musk Deer

[Objective] The pathogenic Escherichia coli in musk deer was classified at molecular level to provide basic materials for molecular epidemiology of pathogenic Escherichia coli in musk deer. [Method] Plasmids from 24 pathogenic Escherichia coli in musk deer were extracted by the Lysis Triton method, and then identified by single enzyme digestion with three endonucleases of Hind Ⅲ, EcoR Ⅰ and BamH Ⅰ. [Result] The yield rate of plasmids was 91.6%, and 24 pathogenic Escherichia coli in musk deer had the identical or similar plasmid profiles. [Conclusion] Plasmid DNA analysis offers scientific basis for molecular epidemiology of pathogenic Escherichia coli in musk deer in Sichuan Institute of Musk Deer Breeding.

2022-2023年山东省A(H1N1)pdm09流感病毒HA、NA基因变异特征分析

目的 了解山东省2022-2023流感监测年度分离的A(H1N1)pdm09亚型流感病毒血凝素(hemagglutinin,HA)和神经氨酸酶(neuraminidase,NA)基因的变异特征,为流感的防控提供科学依据。方法 从流感监测网络实验室分离的流感毒株中按地市随机选取14株A(H1N1)pdm09亚型流感毒株,以WHO推荐的当季疫苗株为参考进行全基因组测序,并采用荧光法开展神经氨酸酶抑制(neuraminidase inhibition,NI)实验以评估药物敏感性。结果 山东省2022-2023年度分离的A(H1N1)pdm09流感病毒属于6B.1A分支中的5a.2a进化簇,核苷酸序列比对分析显示,HA和NA基因与2021-2023年度北半球疫苗株A/Victoria/2570/2019的亲缘关系较为接近,同源性分别为98.5%~98.7%和98.8%~99.1%。氨基酸序列分析显示,HA蛋白有20个位点发生了氨基酸序列变异,并发现1株病毒可能发生抗原漂移,有3株病毒发生了HA蛋白糖基化位点的缺失。NA酶相关重要位点未发生变异。NI实验显示,所测流感毒株均对抗流感病毒药物敏感。结论 所监测毒株与疫苗株整体同源性很高,但氨基酸存在一定程度变异,今后有必要持续开展流感病毒基因变异特征监测以了解流感流行的风险,以及评价基因变异对流感疫苗和治疗药物效果的影响。

基于Na-BP-DME@C阳极的长寿命准固态钠-空气电池

钠-空气电池因其能量密度高、成本低而成为金属-空气电池领域的研究热点。然而,以金属钠为阳极的钠-空气电池存在钠枝晶生长、金属钠界面稳定性差以及金属钠的反应活性高等问题,限制了钠-空气电池的快速发展。为解决上述问题,将联苯钠与导电炭黑复合材料Na-BP-DME@C作为阳极,单壁碳纳米角(SWCHNs)作为催化剂,构建准固态钠-空气电池。基于Na-BP-DME@C阳极的准固态钠-空气电池表现出优异的电化学性能,其电压差为1.5 V,功率密度为3.32 mW/cm^(2),在0.1 mA/cm^(2)电流密度下可稳定循环459 h(约459次)。

基于NAS私有云的医院档案电子信息自动管理平台

常规的医院档案电子信息自动管理平台主要使用HTMLPHP(Hyper Text Markup LanguageHypertext Preprocessor)超文本预处理语言生成多选项表单,易受服务器Post混乱作用的影响,导致综合运行性能低下,因此,提出一种基于NAS私有云的医院档案电子信息自动管理平台。硬件部分设计HGYUI4033处理芯片和KLOPA1存储器,软件部分利用NAS搭建档案电子信息管理私有云,生成档案电子信息自动管理架构,从而实现电子档案信息的自动管理。平台测试结果表明,文章设计的医院档案电子信息自动管理平台在不同状态下均能有序运行,综合性能良好,具有可靠性,有一定的应用价值,为提高档案综合管理效率、实现档案数字化管理升级作出一定的贡献。

Transfection of bone marrow mesenchymal stem cells using green fluorescence protein labeled hVEGF165 recombinant plasmid mediated by liposome

Objective:To study the role of bone marrow mesenchymal stem cells(BMSCs)in construction of vascularized engineered tissue.Methods:hVEGF165 was amplified via RT-PCR before recombinant with pShuttle-green fluorescence protein;green fluorescent protein(GFP)-CMV.Then the recombinant shuttle plasmid was transfected into BMSCs with Lipofectamine^(TM)2000 for packaging and amplifying.hVTGF165 mRNA expression in BMSCs cells was tested.Results:The sequence of hVEGFI65 in pShutlle-GFP-hVFGF165 plasmid was confirimed by double-enzyme cleavage method and sequencing.hVECF165 was highly expressed in BMSCs.Conclusions:The GFP/hVECF165 recombinant plasmid vector was constructed successfully and expressed effectively in host cells,which may be helpful for discussing the possibility of the application of VEGF165-BMSCs in tissue engineering and ischemic disease cure.

ISOLATION OF PLASMID FROM THE BLUE-GREEN ALGA SPIRULINA PLATENSIS

CCC plasmid was isolated from an economically important blue-green alga- Spirulina platensis (1.7×106 dalton from the S6 strain and 1.2×106 dalton from the F, strain) using a rapid method based on ultrasonic disruption of algal cells and alkaline removal of chromosomal DNA. The difference in the molecular weight of the OOC DNAs from the two strains differing in form suggests that plasmid may be related with the differentiation of algal form. This modified method, which does not use any lysozyme, is a quick and effective method of plasmid isolation, especially for filamentous blue-green algae.

Catalytic hydrolysis of phosphate diester (BNPP) and plasmid DNA by mononuclear macrocyclic polyamine metal complexes

The activities of the catalytic hydrolysis of phosphate diester （BNPP） [bis（p-nitrophenyl）phosphate diester] and plasmid DNA （pUC 18） by mononuclear macrocyclic polyamine metal complexes have been investigated in this paper. The results showed that the highest activity in hydrolysis of BNPP was obtained with le--Zn（II） complex （composed of lipophilic group） as catalyst. The hydrolysis rate enhancement is up to 3.64 × 10^4 fold. These metal complexes could effectively promote the cleavage of plasmid DNA （pUC18） at physiological conditions.

CABYR RNAi plasmid construction and NF-κB signal transduction pathway

AIM:To construct the CABYR RNAi plasmid and study its relation with the nuclear factor(NF)-κB signal transduction pathway.METHODS:Human CABYR mRNA sequence was obtained from GenBank.The structure of cDNA sequence for the short hairpin RNA was BbsⅠ+sense+loop+ antisense+transcription terminator+KpnⅠ+Bam HⅠ.A CABYR silencing plasmid was constructed and transfected into the human embryo cell line 293T.Quantitative real-time polymerase chain reaction was used to analyze CABYR and NF-κB gene expression.RESULTS:The CABYR and NF-κB expressions were detected in 293T cells.The oligonucleotide(5'-GCT-CAGATGTTAGGTAAAG-3')efficiently silenced the expression of CABYR.The expression of NF-κB was not significantly affected by silencing CABYR(P=0.743).CONCLUSION:CABYR can be found in the human embryo cell line 293T.Cabyrmid 2 can efficiently silence its target,CABYR,indicating that CABYR is not related with the NF-κB signal transduction pathway.

基于NAS和教学诊改的多模态教学大数据存储访问优化研究

本文提出一种基于网络附加存储(NAS)和教学诊断与改进(诊改)的多模态教学大数据存储与访问优化方案。该方案通过NAS实现多模态教学资源的集中存储、高效管理和安全共享,利用这些多模态教学数据实现教学活动的持续诊断改进和教育质量的提升。本文分析了NAS和多模态教学数据的特点、存储要求以及NAS在其中的应用。在此基础上,本文结合教学诊改流程,设计了基于NAS的多模态教学大数据存储优化方案。

Elimination of Multidrug Resistant Plasmid pEIB202 in Fish Pathogenic Edwardsiella tarda

[Objective] The aim of the research was to investigate the function of large plasmid pEIB202 in the pathogenesis of Edwardsiella tarda EIB202 and to eliminate the plasmid pEIB202,so as to lay the foundation for developing safe and live attenu- ated vaccine against E, tarda. [Method] sacB was used as reverse screening marker to eliminate the plasmid by using homologous recombination technique. [Result] The plasmid pEIB202 was sequenced and it was found that the plasmid encoded multiple resistant genes and some components in type IV secretion system（T4SS）,which sug- gested that the plasmid might be related with the multiple drug-resistance and pathogenicity of E. tarda. The plasmid-eliminated strain EIB202Ap lost the resistance to chloramphenicol and tetracycline,but its growth,virulence and secretion of extra- cellular proteins had no significant difference with wild-type plants. [Conclusion] pEIB202 plasmid is the main reason that caused the multi-drug resistance of EIB202 and might have indirect effects in the pathogenesis of EIB202.

Extraction of plasmid-like DNA and high-quality total DNA from Porphyra yezoensis

Somatic cells were prepared from sea snail enzyme digests of Porphyra yezoensis thalli. Us ing SDS - Proteinase K as extraction solution, total DNA was isolated from the somatic cells. The crude extracts of total DNA were purified with glassmilk, and the resulting DNA was of sufficient quality for digestion of restriction endonuclease. DNA bands were clearly observed in the restriction patterns of EcoRI, PstI and HaeIII respectively. The presence of DNA hands in the restriction pattern of total DNA indicated that the genome of Porphyra yezoensis may be small. Unexpectedly, using guanidinium isoth iocyanate and sarcosyl as extraction solution, a plasmid-like DNA band (2.3 Kb) was directly found in the isolated total DNA of Porphyra yezoensis. A very simple and convenient method for plasmid-like DNA isolation has been established.

Knocking-down of Nogo-A Gene Expression in PC12 Cell Line by Plasmid-based RNAi

To study the inhibitory effect of Nogo-A shRNA on cell line PC12, the Nogo-A shRNA （short hairpin RNA, or shRNA） was designed and synthesized. The annealed shRNA template was inserted into plasmid pGenesil-1 containing enhanced green fluorescent protein （EGFP） gene by gene cloning technique to generate eukaryotic expression vector. The recombinant plasmid was transfected into PC12 cells by lipofecamine2000 and the mRNA and protein expression level of Nogo-A gene was detected by RT-PCR and Western blotting 48 h after the transfection. Gene sequencing showed that that the Nogo-A shRNA eukaryotic expression vector was successfully constructed. No significant change was found in the Nogo-A mRNA and protein expression level in empty vector-transfected group as compared with controls （P〉0.05）, while the expression level in shRNA-transfected group decreased significantly （P〈0.05）. It is concluded that the pGenesil-1/Nogo-AshRNA recombinant plasmid can effectively suppress the expression of Nogo-A gene in PC12 cells.

The Bacterial Isolates and Plasmid Profile of Extended Spectrum Beta-Lactamases Producers Causing Urinary Tract Infection among Pregnant Women in Uyo, Nigeria

Background: Extended spectrum beta-lactamases (ESBLs) are enzymes that compromise the efficacy of all beta-lactams and are spread by plasmids. They are of public health importance the world over;however, in Nigeria in general and Uyo in particular, tests for their detection are not routinely done in hospital laboratories despite increase in treatment failures observed for common clinical conditions like urinary tract infection. Objective: To isolate ESBLs producing uropathogens and the plasmid underlying their resistance to antibiotics. Materials and Methods: Three hundred urine specimens (n = 300) were collected from pregnant women attending antenatal clinics at St. Lukes Hospital, Anua, cultured and incubated according to accepted standard. Identification of isolates was done using Microbact 24E (Oxoid, UK) system. The predominant bacterial pathogens were Escherichia coli (42%) followed by Klebsiella pneumonia (21%), Klebsiella oxytoca (12%), Citrobacter spp. (5%), Proteus mirabilis (7%), Enterobacter spp. (12%) and Acinetobacter baumanii (1%). The isolated bacteria were tested for their antibiotic susceptibility using Clinical Laboratory Standard Institute (CLSI) recommended disc diffusion method. A Double Disk Synergy Test (DDST) and Phenotypic Disk Confirmatory Test (PDCT) were performed to determine ESBL production. Chromagar ESBL was also used to test for the presence of ESBL producing isolates. The plasmid content of ESBL producing isolates and their participation in drug resistance were investigated. Results: Of the 80 bacterial isolates causing urinary tract infection in these women, the ESBL producers were found to be 16 (20%). Out of these 16 ESBL producing urogenital isolates Klebsiella pneumonia (8, 50%) was the most prevalent. Others include Escherichia coli (38%), Klebsiella oxytoca (6%) and Enterobacter cloacae (6). Plasmid content of ESBL producing isolates was found to be 87.5%. Conclusion: The Extended Spectrum Beta-lactamase producing uropathogens mainly of plasmid origin are increasingly responsible for the cause of community acquired urinary tract infections in pregnant women in Uyo.

Effects of medium composition on the production of plasmid DNA vector potentially for human gene therapy

Plasmid vector is increasingly applied to gene therapy or gene vaccine. The production of plasmid pCMV-AP3 for cancer gene therapy was conducted in a modified MBL medium using a recombinant E. coli BL21 system. The effects of different MMBL components on plasmid yield, cell mass and specific plasmid DNA productivity were evaluated on shake-flask scale. The results showed that glucose was the optimal carbon source. High plasmid yield (58.3 mg/L) was obtained when 5.0 g/L glucose was added to MMBL. Glycerol could be chosen as a complementary carbon source because of the highest specific plasmid pro- ductivity (37.9 mg DNA/g DCW). After tests of different levels of nitrogen source and inorganic phosphate, a modified MMBL medium was formulated for optimal plasmid production. Further study showed that the initial acetate addition (less than 4.0 g/L) in MMBL improved plasmid production significantly, although it inhibited cell growth. The results will be useful for large-scale plasmid production using recombinant E. coli system.

Construction of a eukaryotic expression plasmid for human retina-derived neurotrophin-3

Neurotrophin-3 （NT-3） can promote the repair of central nervous system and retinal damage. In previous reports, NT-3 has been expressed by viral vectors. However, plasmid vectors have a safer profile compared with viral vectors in clinical studies. This study recombined amplified human retinal NT-3 with a eukaryotic expression plasmid containing green fluorescent protein （GFP） to construct an NT-3 expression plasmid, pEGFP-N1-NT-3. The transfection efficiency 48 hours after pEGFP-N1-NT-3 transfection to 293T cells was 50.06 ＋ 2.78%. Abundant NTo3-GFP was expressed in 293T cells as observed by fluorescence microscopy, suggesting the construct pEGFP-N1-NT-3 effectively expressed and secreted NT-3-GFP. Secretory vesicles containing NT-3-GFP were observed in a constant location in cells by laser scan confocal microscopy, indicating the expression and secretion processes of NT-3 in eukaryotic cells were in accordance with the physical synthesis processes of secreted proteins. Western blot assay showed that pro-NTo3-GFP had a molecular weight of 56 kDa, further confirming NT-3-GFP expression. At 48 hours after transfection, the concentration of NT-3 in culture medium was 22.3 ng/mL, suggesting NT-3 produced by pEGFP-N1-NT-3 was efficiently secreted. This study constructed a human retinal-derived NT-3 eukaryotic expression plasmid that efficiently expressed and secreted NT-3.

低盐水体Na^(+)/K^(+)对凡纳滨对虾生长、体成分与肝胰腺、鳃组织结构的影响

缺钾在内陆低盐度盐碱水中经常发生,为探究低盐水体中不同钾缺乏程度对凡纳滨对虾生长、存活、体成分以及鳃和肝胰腺组织结构的影响,实验参照海水离子组成配置盐度为2的低盐度水体,在Na^(+)/K^(+)(mg/mg)比值为27、47、67、87、107 (分别记为A、B、C、D、E组)的条件下,对体重为(1.04±0.23) g的凡纳滨对虾幼虾开展了为期60 d的养殖实验。结果显示,E组对虾的存活率为44.64%±20.95%,显著低于A、B、D三组;E组体重为(4.86±0.66) g,显著低于其他4组;A~D组之间的湿重、增重率、特定生长率差异不显著,但均大于E组且差异显著;在饲料系数上,E组最高并与A、D组差异显著。在体成分上,各组全虾钾含量、灰分含量差异不显著,E组的水分含量高于其他组,并与A、B组差异显著;E组粗蛋白含量最低,且与B组差异显著。E组对虾鳃组织角质层明显受损,红细胞数量减少,空泡增多,肝胰腺B细胞及其内部转运泡体积增大,肝小管结构受损。研究表明,低盐条件下严重缺钾引起了对虾鳃和肝胰腺损伤,降低了对虾的存活率和生长率;水体缺钾在前期即可对对虾的生长产生明显影响,而对存活的影响随养殖时间的增加而增大。实验结果有助于为内陆低盐度盐碱水养殖凡纳滨对虾提供理论依据。

Construction of recombinant eukaryotic expression plasmid containing murine CD40 ligand gene and its expression in H22 cells

AIM: To construct a recombinant murine CD40 ligand (mCD40L) eukaryotic expression vector for gene therapy and target therapy of hepatocellular carcinoma (HCC).METHODS: mCD40L cDNA was synthesized by RT-PCR with the specific primers and directly cloned into T vector to generate middle recombinant. After digestion with restriction endonuclease, the target fragment was subcloned into the multi-clone sites of the eukaryotic vector. The constructed vector was verified by enzyme digestion and sequencing,and the product expressed was detected by RT-PCR and immunofluorescence methods.RESULTS: The full-length mCD40L-cDNA was successfully cloned into the eukaryotic vector through electrophoresis,and mCD40L gene was integrated into the genome of infected H22 cells by RT-PCR. Murine CD40L antigen molecule was observed in the plasma of mCD40L-H22 by indirect immuno-fluorescence staining.CONCLUSION: The recombined mCD40L eukaryotic expression vector can be expressed in H22 cell line. It providesexperimental data for gene therapy and target therapy ofhepatocellular carcinoma.

Na-Mn共掺对磷酸铁锂正极材料结构与性能的影响

利用碳热还原法成功制备了Li_(0.97)Na_(0.03)Fe_(7/8)Mn_(1/8)PO_(4)正极材料,运用XRD、SEM、EDS和电化学测试等手段对其晶体结构、形貌、元素分布和电化学性能进行研究,并结合第一性原理计算分析材料性能提升的机理。结果表明,Na-Mn掺杂一方面导致LiFePO_(4)晶格畸变,晶格体积增大,扩大了锂离子迁移通道,为锂离子嵌入/脱出提供更大的空间;另一方面使材料在电化学性能上表现出优异的高倍率性能和循环稳定性。Na-Mn掺杂有利于提高材料的锂离子扩散系数和电导率,从而提高其电化学性能。基于第一性原理计算结果表明,Na-Mn共掺杂使LiFePO_(4)晶格膨胀,晶格体积增大,并促使带隙宽度减小,增强了费米能级附近的电子态密度,提高了材料的电子电导率和锂离子迁移率。

Construction and identification of Fas-targeting siRNA-expressing plasmid

Objective: To study the therapeutic potential of Fas inhibition in different diseases, a Fas-targeting siRNA (small interfering)-expressing plasmid was constructed. Methods: The U6 promoter cassette and siFas (small interfering RNA that inhibit Fas expression) template sequence were obtained by PCR method. They were cloned into modified pcDNA3.1. The resultant plasmid pU6-siFas was transfected into P815 cells with lipofectin2000 and selected under G-418-containing culture medium. Fas inhibition in stably transfected cells was detected by immunocytochemistry. Results: The plasmid pU6-siFas efficiently reduced the expression of Fas and conferred G-418 resistance in P815 cells. Conclusion: The successful construction of the siRNA expressing plasmid will facilitate the application of RNA interference technique and lay the foundation for further study of Fas inhibition in the treatment of different diseases such as aplastic anemia and acute liver failure.

Towards a better understanding of antimicrobial resistance dissemination:what can be learnt from studying model conjugative plasmids?

Bacteria can evolve rapidly by acquiring new traits such as virulence,metabolic properties,and most importantly,antimicrobial resistance,through horizontal gene transfer(HGT).Multidrug resistance in bacteria,especially in Gram-negative organisms,has become a global public health threat often through the spread of mobile genetic elements.Conjugation represents a major form of HGT and involves the transfer of DNA from a donor bacterium to a recipient by direct contact.Conjugative plasmids,a major vehicle for the dissemination of antimicrobial resistance,are selfish elements capable of mediating their own transmission through conjugation.To spread to and survive in a new bacterial host,conjugative plasmids have evolved mechanisms to circumvent both host defense systems and compete with co-resident plasmids.Such mechanisms have mostly been studied in model plasmids such as the F plasmid,rather than in conjugative plasmids that confer antimicrobial resistance(AMR)in important human pathogens.A better understanding of these mechanisms is crucial for predicting the flow of antimicrobial resistance-conferring conjugative plasmids among bacterial populations and guiding the rational design of strategies to halt the spread of antimicrobial resistance.Here,we review mechanisms employed by conjugative plasmids that promote their transmission and establishment in Gram-negative bacteria,by following the life cycle of conjugative plasmids.