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FURTHER RESULTS ON THE EXISTENCE OF LABELED RESOLVABLE BLOCK DESIGNS
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作者 沈灏 沈佳颖 《Journal of Shanghai Jiaotong university(Science)》 EI 1999年第2期52-56,共5页
It was proved in this paper that there exists a labeled resolvable block design LRB (4,3; v ) if and only if v ≡0 (mod 4) and v ≥8, with 8 possible exceptions. It was also proved that there exists a nearly Kirkman s... It was proved in this paper that there exists a labeled resolvable block design LRB (4,3; v ) if and only if v ≡0 (mod 4) and v ≥8, with 8 possible exceptions. It was also proved that there exists a nearly Kirkman system NKS (2,4; v ) if and only if v ≡0 (mod 12) and v ≥24, except possibly when v =264 or 372. 展开更多
关键词 labeled resolvable BLOCK DESIGN NEARLY KIRKMAN system group divisible DESIGN
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Resolvable Spaces and Compactifications
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作者 Monerah Al-Hajri Karim Belaid 《Advances in Pure Mathematics》 2013年第3期365-367,共3页
This paper deals with spaces such that their compactification is a resolvable space. A characterization of space such that its one point compactification (resp. Wallman compactification) is a resolvable space is given.
关键词 resolvable SPACE Alexandroff COMPACTIFICATION Wallman COMPACTIFICATION
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Tripling Construction for Large Sets of Resolvable Directed Triple Systems 被引量:3
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作者 Jun Ling ZHOU Yan Xun CHANG 《Acta Mathematica Sinica,English Series》 SCIE CSCD 2006年第1期311-318,共8页
In this paper, we first define a doubly transitive resolvable idempotent quasigroup (DTRIQ), and show that aDTRIQ of order v exists if and only ifv ≡0(mod3) and v ≠ 2(mod4). Then we use DTRIQ to present a trip... In this paper, we first define a doubly transitive resolvable idempotent quasigroup (DTRIQ), and show that aDTRIQ of order v exists if and only ifv ≡0(mod3) and v ≠ 2(mod4). Then we use DTRIQ to present a tripling construction for large sets of resolvable directed triple systems, which improves an earlier version of tripling construction by Kang (J. Combin. Designs, 4 (1996), 301-321). As an application, we obtain an LRDTS(4·3^n) for any integer n ≥ 1, which provides an infinite family of even orders. 展开更多
关键词 Doubly transitive resolvable idempotent quasigroup resolvable directed triple system Large set Tripling construction
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More Large Sets of Resolvable MTS and DTS with Even Orders
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作者 Qing-de Kang Rong-jia Xu 《Acta Mathematicae Applicatae Sinica》 SCIE CSCD 2008年第2期233-252,共20页
In this paper, we first introduce a special structure that allows us to construct a large set of resolvable Mendelsohn triple systems of orders 2q + 2, or LRMTS(2q + 2), where q = 6t + 5 is a prime power. Using a... In this paper, we first introduce a special structure that allows us to construct a large set of resolvable Mendelsohn triple systems of orders 2q + 2, or LRMTS(2q + 2), where q = 6t + 5 is a prime power. Using a computer, we find examples of such structure for t C T = {0, 1, 2, 3, 4, 6, 7, 8, 9, 14, 16, 18, 20, 22, 24}. Furthermore, by a method we introduced in [13], large set of resolvable directed triple systems with the same orders are obtained too. Finally, by the tripling construction and product construction for LRMTS and LRDTS introduced in [2, 20, 21], and by the new results for LR-design in [8], we obtain the existence for LRMTS(v)and LRDTS(v), where v = 12(t + 1) mi≥0(2.7mi+1)mi≥0(2.13ni+1)and t∈T,which provides more infinite family for LRMTS and LRDTS of even orders. 展开更多
关键词 Large set resolvable Mendelsohn triple system tripling construction resolvable directed triple system
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Time-resolved ultra-small-angle X-ray scattering beamline(BL10U1)at SSRF
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作者 Wen-Qiang Hua Chun-Ming Yang +12 位作者 Ping Zhou Feng Tian Jin-You Lin Yu-Zhu Wang Xiao-Yun Li Xia-Ran Miao Chun-Xia Hong Qiu-Shi Huang Xin-Tong Zhao Yong-Feng Men Jie Wang Xing-Yu Gao Xiu-Hong Li 《Nuclear Science and Techniques》 SCIE EI CAS CSCD 2024年第2期6-19,共14页
The construction of a new beamline,BL10U1,was completed at the Shanghai synchrotron radiation facility in 2020.This multipurpose beamline was designed to provide X-ray scattering techniques such as ultra-small-angle X... The construction of a new beamline,BL10U1,was completed at the Shanghai synchrotron radiation facility in 2020.This multipurpose beamline was designed to provide X-ray scattering techniques such as ultra-small-angle X-ray scattering(USAXS),small-angle X-ray scattering(SAXS),wide-angle X-ray scattering,and microfocus SAXS(μSAXS)for a broad user community.To realize fast time-resolved USAXS experiments,the beamline adopted an in-vacuum undulator with a total length of 1.6 m as the photon source.An in-house cryogenic-cooled double multilayer monochromator was installed to deliver a photon flux of approximately 10^(13) photons/s at a photon energy of 10 keV.The three-year successful operation of this beamline demonstrated that the monochromator operated smoothly,as expected.BL10U1 has three end stations in succession:USAXS end station,μSAXS end station,and end station for industrial applications.The minimum scattering vector q~0.0042 nm^(-1) at 10 keV can be achieved at the USAXS end station equipped with a 28 m-long and 1.8 m-diameter vacuum flight tube.At theμSAXS end station,a beam spot of less than 10×8μm was achieved for micro-SAXS experiments.In contrast,in situ experimental instruments up to 5 m high and 8 m wide can be mounted at the industrial application end station,which offers industrial scientists the opportunity to use their large industrial equipment.BL10U1 opens up a new capability to investigate phenomena such as non-equilibrium and dynamic processes of materials with a wide length scale from angstroms to micrometers with millisecond time resolution.In this paper,we also report beamline design considerations and commissioning results. 展开更多
关键词 Synchrotron radiation Ultra-small-angle X-ray scattering Micro small-angle X-ray scattering USAXS Time resolved μSAXS
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Parallelization strategies for resolved simulations of fluid-structure-particle interactions
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作者 Jianhua QIN Fei LIAO +1 位作者 Guodan DONG Xiaolei YANG 《Applied Mathematics and Mechanics(English Edition)》 SCIE EI CSCD 2024年第5期857-872,共16页
Fluid-structure-particle interactions in three spatial dimensions happen in many environmental and engineering flows.This paper presents the parallel algorithms for the hybrid diffuse and sharp interface immersed boun... Fluid-structure-particle interactions in three spatial dimensions happen in many environmental and engineering flows.This paper presents the parallel algorithms for the hybrid diffuse and sharp interface immersed boundary(IB)method developed in our previous work.For the moving structure modeled using the sharp interface IB method,a recursive box method is developed for efficiently classifying the background grid nodes.For the particles modeled using the diffuse interface IB method,a‘master-slave’approach is adopted.For the particle-particle interaction(PPI)and particle-structure interaction(PSI),a fast algorithm for classifying the active and inactive Lagrangian points,which discretize the particle surface,is developed for the‘dry’contact approach.The results show that the proposed recursive box method can reduce the classifying time from 52seconds to 0.3 seconds.Acceptable parallel efficiency is obtained for cases with different particle concentrations.Furthermore,the lubrication model is utilized when a particle approaches a wall,enabling an accurate simulation of the rebounding phenomena in the benchmark particle-wall collision problem.At last,the capability of the proposed computational framework is demonstrated by simulating particle-laden turbulent channel flows with rough walls. 展开更多
关键词 particle-resolved direct numerical simulation particle-laden flow complex geometry resolved fluid-structure-particle interaction(RFSPI) immersed boundary(IB)method
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RESOLVABLE TWOFOLD TRIPLE SYSTEMS WITHOUT REPEATED TRIPLES
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作者 沈灏 《Chinese Science Bulletin》 SCIE EI CAS 1990年第2期89-92,共4页
Ⅰ. INTRODUCTIONA triple system S<sub>λ</sub>(2, 3, v)is an ordered pair (V,), where Vis a v-set, is a collection of 3-subsets (called triples ) of V such that each pair of distinct dements of V is ... Ⅰ. INTRODUCTIONA triple system S<sub>λ</sub>(2, 3, v)is an ordered pair (V,), where Vis a v-set, is a collection of 3-subsets (called triples ) of V such that each pair of distinct dements of V is contained in exactly λ triples. An S<sub>2</sub>(2, 3, v)is called a twofold triple system. 展开更多
关键词 twofold TRIPLE system resolvable ALMOST resolvable simple.
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Almost resolvable maximum packings of complete graphs with 5-cycles
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作者 Min ZHOU Haitao CAO 《Frontiers of Mathematics in China》 SCIE CSCD 2015年第2期461-475,共15页
Let X be the vertex set of Kn. A k-cycle packing of Kn is a triple (X, C, L), where C is a collection of edge disjoint k-cycles of Kn and L is the collection of edges of Kn not belonging to any of the k-cycles in C.... Let X be the vertex set of Kn. A k-cycle packing of Kn is a triple (X, C, L), where C is a collection of edge disjoint k-cycles of Kn and L is the collection of edges of Kn not belonging to any of the k-cycles in C. A k-cycle packing (X, C, L) is called resolvable if C can be partitioned into almost parallel classes. A resolvable maximum k-cycle packing of Kn, denoted by k-RMCP(n), is a resolvable k-cycle packing of Kn, (X, C, L), in which the number of almost parallel classes is as large as possible. Let D(n, k) denote the number of almost parallel classes in a k-RMCP(n). D(n, k) for k = 3, 4 has been decided. When n ≡ k (mod 2k) and k ≡1 (mod 2) or n ≡1 (mod 2k) and k e {6, 8, 10, 14} U{m: 5 ≤ m ≤ 49, m ≡1 (mod 2)}, D(n,k) also has been decided with few possible exceptions. In this paper, we shall decide D(n, 5) for all values of n ≥ 5. 展开更多
关键词 Cycle packing resolvable maximum cycle packing cycle frame
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Efficacy of activating blood and resolving stasis therapy for IgA nephropathy:a systematic review and meta-analysis
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作者 Qiu-Mei Lan Jie Li +4 位作者 Han-Qing Zang Zi-Jun Zhou Ya-Xuan Fang Yun-Ze Xing Bo Yang 《Medical Data Mining》 2024年第2期9-16,共8页
Background:To systematically evaluate the efficacy and safety of activating blood and resolving stasis in patients with IgA nephropathy.Methods:From inception to May 2022,databases including PubMed,Embase,the Cochrane... Background:To systematically evaluate the efficacy and safety of activating blood and resolving stasis in patients with IgA nephropathy.Methods:From inception to May 2022,databases including PubMed,Embase,the Cochrane Library,Web of Science,WanFang database,Chinese Biomedical Database,VIP,and China National Knowledge Infrastructure were searched for randomized controlled trials about enhancing blood circulation and removing stasis for IgA nephropathy.For the articles that satisfied the requirements,quality assessment and meta-analysis were done.Results:Seventeen randomized controlled trials with a total of 1653 patients were included.Meta-analysis showed that activating blood and resolving stasis could increase therapeutic effectiveness(risk ratio(RR)=-0.47,95%confidence interval(CI)(-0.37,-0.2),P=0.0006)and decrease levels of serum creatinine(RR=-0.47,95%CI(-0.37,-0.2),P=0.0006),urea nitrogen(RR=0.85,95%CI(1.44,0.26),P=0.005),24-hour urinary protein quantification(RR=1.6,95%CI(2.44,0.95).P=0.00001),and urine red blood cell count(RR=1.7,95%CI(2.57,0.82),P=0.0001).There was no significant difference between the two groups in terms of security(RR=0.6,95%CI(0.36,1.01),P=0.05).Conclusion:Western medicine combined activating blood and resolving stasis is more efficient than Western medicine therapy alone in treating IgA nephropathy,but it still needs to be supported by additional large-scale,multi-center randomized controlled clinical trials due to the poor quality of the included trials. 展开更多
关键词 IgA nephropathy activating blood and resolving stasis META-ANALYSIS randomized controlled trial blood stasi
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Exactly Solvable Two-Parameter Models of Relativistic δ′s -Sphere Interactions in Quantum Mechanics
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作者 Jules Manirambona Juma Shabani Alfred Vyabandi 《Journal of Applied Mathematics and Physics》 2024年第4期1263-1285,共23页
We make a systematic study of two-parameter models of δ ′ s -sphere interaction and δ ′ s -sphere plus a Coulomb interaction. Where δ ′ s interaction denotes the δ ′ -sphere interaction of the second kind. We ... We make a systematic study of two-parameter models of δ ′ s -sphere interaction and δ ′ s -sphere plus a Coulomb interaction. Where δ ′ s interaction denotes the δ ′ -sphere interaction of the second kind. We provide the mathematical definitions of Hamiltonians and obtain new results for both models, in particular the resolvents equations, spectral properties and some scattering quantities. 展开更多
关键词 Boundary Conditions Problem -Sphere Interactions Self-Adjoint Operator Resolvent Equation Spectral Properties Scattering Theory
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THE EXISTENCE OF RESOLVABLE BIBD WITH λ = 1
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作者 常彦勋 《Acta Mathematicae Applicatae Sinica》 SCIE CSCD 2000年第4期373-385,共13页
Let k be any integer and k≥3. In this article it is proved that the necessary condition υ=k (mod k(k-1)) for the existence of an RB(v,k,1) is sufficient whenever u>exp{exp{k12k2}}.
关键词 Pairwise balanced design PBD-closed resolvable BI?
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High-quality haplotype-resolved genome assembly of cultivated octoploid strawberry 被引量:2
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作者 Jianxin Mao Yan Wang +8 位作者 Baotian Wang Jiqi Li Chao Zhang Wenshuo Zhang Xue Li Jie Li Junxiang Zhang He Li Zhihong Zhang 《Horticulture Research》 SCIE CSCD 2023年第1期299-310,共12页
Cultivated strawberry(Fragaria×ananassa),a perennial herb belonging to the family Rosaceae,is a complex octoploid with high heterozygosity at most loci.However,there is no research on the haplotype of the octoplo... Cultivated strawberry(Fragaria×ananassa),a perennial herb belonging to the family Rosaceae,is a complex octoploid with high heterozygosity at most loci.However,there is no research on the haplotype of the octoploid strawberry genome.Here we aimed to obtain a high-quality genome of the cultivated strawberry cultivar,“Yanli”,using single molecule real-time sequencing and high-throughput chromosome conformation capture technology.The“Yanli”genome was 823 Mb in size,with a long terminal repeat assembly index of 14.99.The genome was phased into two haplotypes,Hap1(825 Mb with contig N50 of 26.70 Mb)and Hap2(808 Mb with contig N50 of 27.51 Mb).Using the combination of Hap1 and Hap2,we obtained for the first time a haplotype-resolved genome with 56 chromosomes for the cultivated octoploid strawberry.We identified a∼10 Mb inversion and translocation on chromosome 2-1.104957 and 102356 protein-coding genes were annotated in Hap1 and Hap2,respectively.Analysis of the genes related to the anthocyanin biosynthesis pathway revealed the structural diversity and complexity in the expression of the alleles in the octoploid F.×ananassa genome.In summary,we obtained a high-quality haplotype-resolved genome assembly of F.×ananassa,which will provide the foundation for investigating gene function and evolution of the genome of cultivated octoploid strawberry. 展开更多
关键词 STRAW CULTIVAR RESOLVED
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A gap-free and haplotype-resolved lemon genome provides insights into flavor synthesis and huanglongbing (HLB) tolerance 被引量:2
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作者 Yixue Bao Ziyan Zeng +9 位作者 Wei Yao Xiao Chen Mengwei Jiang Akbar Sehrish Bo Wu Charles A.Powell Baoshan Chen Jianlong Xu Xingtan Zhang Muqing Zhang 《Horticulture Research》 SCIE CSCD 2023年第4期13-22,共10页
The lemon(Citrus limon;family Rutaceae)is one of the most important and popular fruits worldwide.Lemon also tolerates huan-glongbing(HLB)disease,which is a devastating citrus disease.Here we produced a gap-free and ha... The lemon(Citrus limon;family Rutaceae)is one of the most important and popular fruits worldwide.Lemon also tolerates huan-glongbing(HLB)disease,which is a devastating citrus disease.Here we produced a gap-free and haplotype-resolved chromosome-scale genome assembly of the lemon by combining Pacific Biosciences circular consensus sequencing,Oxford Nanopore 50-kb ultra-long,and high-throughput chromatin conformation capture technologies.The assembly contained nine-pair chromosomes with a contig N50 of 35.6 Mb and zero gaps,while a total of 633.0 Mb genomic sequences were generated.The origination analysis identified 338.5Mb genomic sequences originating from citron(53.5%),147.4Mb frommandarin(23.3%),and 147.1Mb frompummelo(23.2%).The genome included 30528 protein-coding genes,and most of the assembled sequences were found to be repetitive sequences.Several significantly expanded gene families were associated with plant-pathogen interactions,plant hormone signal transduction,and the biosynthesis of major active components,such as terpenoids and f lavor compounds.Most HLB-tolerant genes were expanded in the lemon genome,such as 2-oxoglutarate(2OG)/Fe(II)-dependent oxygenase and constitutive disease resistance 1,cell wall-related genes,and lignin synthesis genes.Comparative transcriptomic analysis showed that phloem regeneration and lower levels of phloem plugging are the elements that contribute to HLB tolerance in lemon.Our results provide insight into lemon genome evolution,active component biosynthesis,and genes associated with HLB tolerance. 展开更多
关键词 SYNTHESIS insight RESOLVED
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Computing Connected Resolvability of Graphs Using Binary Enhanced Harris Hawks Optimization 被引量:1
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作者 Basma Mohamed Linda Mohaisen Mohamed Amin 《Intelligent Automation & Soft Computing》 SCIE 2023年第5期2349-2361,共13页
In this paper,we consider the NP-hard problem offinding the minimum connected resolving set of graphs.A vertex set B of a connected graph G resolves G if every vertex of G is uniquely identified by its vector of distanc... In this paper,we consider the NP-hard problem offinding the minimum connected resolving set of graphs.A vertex set B of a connected graph G resolves G if every vertex of G is uniquely identified by its vector of distances to the ver-tices in B.A resolving set B of G is connected if the subgraph B induced by B is a nontrivial connected subgraph of G.The cardinality of the minimal resolving set is the metric dimension of G and the cardinality of minimum connected resolving set is the connected metric dimension of G.The problem is solved heuristically by a binary version of an enhanced Harris Hawk Optimization(BEHHO)algorithm.This is thefirst attempt to determine the connected resolving set heuristically.BEHHO combines classical HHO with opposition-based learning,chaotic local search and is equipped with an S-shaped transfer function to convert the contin-uous variable into a binary one.The hawks of BEHHO are binary encoded and are used to represent which one of the vertices of a graph belongs to the connected resolving set.The feasibility is enforced by repairing hawks such that an addi-tional node selected from V\B is added to B up to obtain the connected resolving set.The proposed BEHHO algorithm is compared to binary Harris Hawk Optimi-zation(BHHO),binary opposition-based learning Harris Hawk Optimization(BOHHO),binary chaotic local search Harris Hawk Optimization(BCHHO)algorithms.Computational results confirm the superiority of the BEHHO for determining connected metric dimension. 展开更多
关键词 Connected resolving set binary optimization harris hawks algorithm
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Minimal Doubly Resolving Sets of Certain Families of Toeplitz Graph
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作者 Muhammad Ahmad Fahd Jarad +1 位作者 Zohaib Zahid Imran Siddique 《Computer Modeling in Engineering & Sciences》 SCIE EI 2023年第6期2681-2696,共16页
The doubly resolving sets are a natural tool to identify where diffusion occurs in a complicated network.Many realworld phenomena,such as rumour spreading on social networks,the spread of infectious diseases,and the s... The doubly resolving sets are a natural tool to identify where diffusion occurs in a complicated network.Many realworld phenomena,such as rumour spreading on social networks,the spread of infectious diseases,and the spread of the virus on the internet,may be modelled using information diffusion in networks.It is obviously impractical to monitor every node due to cost and overhead limits because there are too many nodes in the network,some of which may be unable or unwilling to send information about their state.As a result,the source localization problem is to find the number of nodes in the network that best explains the observed diffusion.This problem can be successfully solved by using its relationship with the well-studied related minimal doubly resolving set problem,which minimizes the number of observers required for accurate detection.This paper aims to investigate the minimal doubly resolving set for certain families of Toeplitz graph Tn(1,t),for t≥2 and n≥t+2.We come to the conclusion that for Tn(1,2),the metric and double metric dimensions are equal and for Tn(1,4),the double metric dimension is exactly one more than the metric dimension.Also,the double metric dimension for Tn(1,3)is equal to the metric dimension for n=5,6,7 and one greater than the metric dimension for n≥8. 展开更多
关键词 Family of Toeplitz graph resolving sets metric dimension doubly resolving sets double metric dimension
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Promise of spatially resolved omics for tumor research
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作者 Yanhe Zhou Xinyi Jiang +4 位作者 Xiangyi Wang Jianpeng Huang Tong Li Hongtao Jin Jiuming He 《Journal of Pharmaceutical Analysis》 SCIE CAS CSCD 2023年第8期851-861,共11页
Tumors are spatially heterogeneous tissues that comprise numerous cell types with intricate structures.By interacting with the microenvironment,tumor cells undergo dynamic changes in gene expression and metabolism,res... Tumors are spatially heterogeneous tissues that comprise numerous cell types with intricate structures.By interacting with the microenvironment,tumor cells undergo dynamic changes in gene expression and metabolism,resulting in spatiotemporal variations in their capacity for proliferation and metastasis.In recent years,the rapid development of histological techniques has enabled efficient and high-throughput biomolecule analysis.By preserving location information while obtaining a large number of gene and molecular data,spatially resolved metabolomics(SRM)and spatially resolved transcriptomics(SRT)approaches can offer new ideas and reliable tools for the in-depth study of tumors.This review provides a comprehensive introduction and summary of the fundamental principles and research methods used for SRM and SRT techniques,as well as a review of their applications in cancer-related fields. 展开更多
关键词 TUMOR Spatially resolved transcriptomics Spatially resolved metabolomics
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Effects of temperature on critical resolved shear stresses of slip and twining in Mg single crystal via experimental and crystal plasticity modeling
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作者 Kwang Seon Shin Lifei Wang +3 位作者 Mingzhe Bian Shihoon Choi Alexander Komissarov Viacheslav Bazhenov 《Journal of Magnesium and Alloys》 SCIE EI CAS CSCD 2023年第6期2027-2041,共15页
Magnesium(Mg)single crystal specimens with three different orientations were prepared and tested from room temperature to 733 K in order to systematically evaluate effects of temperature on the critical resolved shear... Magnesium(Mg)single crystal specimens with three different orientations were prepared and tested from room temperature to 733 K in order to systematically evaluate effects of temperature on the critical resolved shear stress(CRSS)of slips and twinning in Mg single crystals.The duplex non-basal slip took place in the temperature range from 613 to 733 K when the single crystal samples were stretched along the<0110>direction.In contrast,the single basal slip and prismatic slip were mainly activated in the temperature range from RT to 733 K when the tensile directions were inclined at an angle of 45°with the basal and the prismatic plane,respectively.Viscoplastic self-consistent(VPSC)crystal modeling simulations with genetic algorithm code(GA-code)were carried out to obtain the best fitted CRSSs of major deformation modes,such as basal slip,prismatic slip,pyramidalⅡ,{1012}tensile twinning and{1011}compressive twinning when duplex slips accommodated deformation.Additionally,CRSSs of the basal and the prismatic slip were derived using the Schmid factor(SF)criterion when the single slip mainly accommodated deformation.From the CRSSs of major deformation modes obtained by the VPSC simulations and the SF calculations,the CRSSs for basal slip and{1012}tensile twinning were found to show a weak temperature dependence,whereas those for prismatic,slip and{1011}compressive twinning exhibited a strong temperature dependence.From the comparison of previous results,VPSC-GA modeling was proved to be an effective method to obtain the CRSSs of various deformation modes of Mg and its alloys. 展开更多
关键词 MAGNESIUM Single crystal Critical resolve shear stress SLIP TWINNING
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Single-cell and spatially resolved omics:Advances and limitations
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作者 Jiaye Chen Yongcheng Wang Jina Ko 《Journal of Pharmaceutical Analysis》 SCIE CAS CSCD 2023年第8期833-835,共3页
Recent advances in experimental and computational single-cell and spatially resolved omics have opened new avenues for research in biology and medicine.These technologies allow for the study of individual cells in unp... Recent advances in experimental and computational single-cell and spatially resolved omics have opened new avenues for research in biology and medicine.These technologies allow for the study of individual cells in unprecedented detail,providing insights into the heterogeneity within tissues and organs,and how different cells interact with each other.Humans and other eukaryotes are composed of billions of cells,each with vastly heterogeneous cell types and functional cell states determined by intrinsic and extrinsic factors. 展开更多
关键词 ORGANS spatially RESOLVED
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The haplotype-resolved autotetraploid genome assembly provides insights into the genomic evolution and fruit divergence in wax apple(Syzygium samarangense(Blume)Merr.and Perry)
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作者 Xiuqing Wei Min Chen +8 位作者 Xijuan Zhang Yinghao Wang Liang Li Ling Xu Huanhuan Wang Mengwei Jiang Caihui Wang Lihui Zeng Jiahui Xu 《Horticulture Research》 SCIE CSCD 2023年第12期108-119,共12页
Wax apple(Syzygium samarangense)is an economically important fruit crop with great potential value to human health because of its richness in antioxidant substances.Here,we present a haplotype-resolved autotetraploid ... Wax apple(Syzygium samarangense)is an economically important fruit crop with great potential value to human health because of its richness in antioxidant substances.Here,we present a haplotype-resolved autotetraploid genome assembly of the wax apple with a size of 1.59 Gb.Comparative genomic analysis revealed three rounds of whole-genome duplication(WGD)events,including two independent WGDs after WGT-γ.Resequencing analysis of 35 accessions partitioned these individuals into two distinct groups,including 28 landraces and seven cultivated species,and several genes subject to selective sweeps possibly contributed to fruit growth,including the KRP1-like,IAA17-like,GME-like,and FLACCA-like genes.Transcriptome analysis of three different varieties during flower and fruit development identified key genes related to fruit size,sugar content,and male sterility.We found that AP2 also affected fruit size by regulating sepal development in wax apples.The expression of sugar transport-related genes(SWEETs and SUTs)was high in‘ZY’,likely contributing to its high sugar content.Male sterility in‘Tub’was associated with tapetal abnormalities due to the decreased expression of DYT1,TDF1,and AMS,which affected early tapetum development.The chromosome-scale genome and large-scale transcriptome data presented in this study offer new valuable resources for biological research on S.samarangense and shed new light on fruit size control,sugar metabolism,and male sterility regulatory metabolism in wax apple. 展开更多
关键词 metabolism sugar RESOLVED
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Two haplotype-resolved genomes reveal important flower traits in bigleaf hydrangea(Hydrangea macrophylla)and insights into Asterid evolution
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作者 Xingbo Wu Sheron A.Simpson +5 位作者 Ramey C.Youngblood Xiaofen FLiu Brian E.Scheffler Timothy A.Rinehart Lisa W.Alexander Amanda M.Hulse-Kemp 《Horticulture Research》 SCIE CSCD 2023年第12期45-57,共13页
The Hydrangea genus belongs to the Hydrangeaceae family,in the Cornales order of flowering plants,which early diverged among the Asterids,and includes several species that are commonly used ornamental plants.Of them,H... The Hydrangea genus belongs to the Hydrangeaceae family,in the Cornales order of flowering plants,which early diverged among the Asterids,and includes several species that are commonly used ornamental plants.Of them,Hydrangea macrophylla is one of the most valuable species in the nursery trade,yet few genomic resources are available for this crop or closely related Asterid species.Two high-quality haplotype-resolved reference genomes of hydrangea cultivars‘Veitchii’and‘Endless Summer’[highest quality at 2.22 gigabase pairs(Gb),396 contigs,N5022.8 megabase pairs(Mb)]were assembled and scaffolded into the expected 18 pseudochromosomes.Utilizing the newly developed high-quality reference genomes along with high-quality genomes of other related flowering plants,nuclear data were found to support a single divergence point in the Asterids clade where both the Cornales and Ericales diverged from the euasterids.Genetic mapping with an F1 hybrid population demonstrated the power of linkage mapping combined with the new genomic resources to identify the gene for inflorescence shape,CYP78A5 located on chromosome 4,and a novel gene,BAM3 located on chromosome 17,for causing double flower.Resources developed in this study will not only help to accelerate hydrangea genetic improvement but also contribute to understanding the largest group of flowering plants,the Asterids. 展开更多
关键词 HYDRA TRAITS resolved
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