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Enhancing m^(6)A modification in the motor cortex facilitates corticospinal tract remodeling after spinal cord injury
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作者 Tian Qin Yuxin Jin +5 位作者 Yiming Qin Feifei Yuan Hongbin Lu Jianzhong Hu Yong Cao Chengjun Li 《Neural Regeneration Research》 SCIE CAS 2025年第6期1749-1763,共15页
Spinal cord injury typically causes corticospinal tract disruption. Although the disrupted corticospinal tract can self-regenerate to a certain degree, the underlying mechanism of this process is still unclear. N6-met... Spinal cord injury typically causes corticospinal tract disruption. Although the disrupted corticospinal tract can self-regenerate to a certain degree, the underlying mechanism of this process is still unclear. N6-methyladenosine(m^(6)A) modifications are the most common form of epigenetic regulation at the RNA level and play an essential role in biological processes. However, whether m^(6)A modifications participate in corticospinal tract regeneration after spinal cord injury remains unknown. We found that expression of methyltransferase 14 protein(METTL14) in the locomotor cortex was high after spinal cord injury and accompanied by elevated m^(6)A levels. Knockdown of Mettl14 in the locomotor cortex was not favorable for corticospinal tract regeneration and neurological recovery after spinal cord injury. Through bioinformatics analysis and methylated RNA immunoprecipitation-quantitative polymerase chain reaction, we found that METTL14 regulated Trib2 expression in an m^(6)A-regulated manner, thereby activating the mitogen-activated protein kinase pathway and promoting corticospinal tract regeneration. Finally, we administered syringin, a stabilizer of METTL14, using molecular docking. Results confirmed that syringin can promote corticospinal tract regeneration and facilitate neurological recovery by stabilizing METTL14. Findings from this study reveal that m^(6)A modification is involved in the regulation of corticospinal tract regeneration after spinal cord injury. 展开更多
关键词 corticospinal tract remodeling epigenetic regulations locomotor cortex m^(6)A modification methyltransferase 14 protein(METTL14) mitogen-activated protein kinase neural regeneration spinal cord injury SYRINGIN TRIB2
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m^(6)A modification of lncRNA in middle ear cholesteatoma
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作者 HE Jun XIE Shumin +3 位作者 JIN Li FU Jinfeng YUAN Qiulin LIU Wei 《中南大学学报(医学版)》 CAS CSCD 北大核心 2024年第5期667-678,共12页
Objective:Middle ear cholesteatoma is a non-tumorous condition that typically leads to hearing loss,bone destruction,and other severe complications.Despite surgery being the primary treatment,the recurrence rate remai... Objective:Middle ear cholesteatoma is a non-tumorous condition that typically leads to hearing loss,bone destruction,and other severe complications.Despite surgery being the primary treatment,the recurrence rate remains high.Therefore,exploring the molecular mechanisms underlying cholesteatoma is crucial for discovering new therapeutic approaches.This study aims to explore the involvement of N6-methyladenosine(m^(6)A)methylation in long non-coding RNAs(lncRNAs)in the biological functions and related pathways of middle ear cholesteatoma.Methods:The m^(6)A modification patterns of lncRNA in middle ear cholesteatoma tissues(n=5)and normal post-auricular skin tissues(n=5)were analyzed using an lncRNA m^(6)A transcriptome microarray.Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway analyses were conducted to identify potential biological functions and signaling pathways involved in the pathogenesis of middle ear cholesteatoma.Methylated RNA immunoprecipitation(MeRIP)-PCR was used to validate the m^(6)A modifications in cholesteatoma and normal skin tissues.Results:Compared with normal skin tissues,1525 lncRNAs were differentially methylated in middle ear cholesteatoma tissues,with 1048 showing hypermethylation and 477 showing hypomethylation[fold change(FC)≥3 or<1/3,P<0.05].GO enrichment analysis indicated that hypermethylated lncRNAs were involved in protein phosphatase inhibitor activity,neuron-neuron synapse,and regulation ofα-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid(AMPA)receptor activity.Hypomethylated lncRNAs were associated with mRNA methyltransferase activity,secretory granule membrane,and mRNA methylation.KEGG analysis revealed that hypermethylated lncRNAs were mainly associated with 5 pathways:the Hedgehog signaling pathway,viral protein interaction with cytokines and cytokine receptors,mitogen-activated protein kinase(MAPK)signaling pathway,cytokine-cytokine receptor interaction,and adrenergic signaling in cardiomyocytes.Hypomethylated lncRNAs were mainly involved in 4 pathways:Renal cell carcinoma,tumor necrosis factor signaling pathway,transcriptional misregulation in cancer,and cytokine-cytokine receptor interaction.Additionally,MeRIP-PCR confirmed the changes in m^(6)A methylation levels in NR_033339,NR_122111,NR_130744,and NR_026800,consistent with microarray analysis.Real-time PCR also confirmed the significant upregulation of MAPK1 and NF-κB,key genes in the MAPK signaling pathway.Conclusion:This study reveals the m^(6)A modification patterns of lncRNAs in middle ear cholesteatoma,suggests a direction for further research into the role of lncRNA m^(6)A modification in the etiology of cholesteatoma.The findings provide potential therapeutic targets for the treatment of middle ear cholesteatoma. 展开更多
关键词 long non-coding rna m6A modifications middle ear cholesteatoma
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New insights into developmental biology of Eimeria tenella revealed by comparative analysis of mRNA N6-methyladenosine modification between unsporulated oocysts and sporulated oocysts
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作者 Qing Liu Bingjin Mu +7 位作者 Yijing Meng Linmei Yu Zirui Wang Tao Jia Wenbin Zheng Wenwei Gao Shichen Xie Xingquan Zhu 《Journal of Integrative Agriculture》 SCIE CSCD 2024年第1期239-250,共12页
Evidence showed that N6-methyladenosine(m^(6)A)modification plays a pivotal role in influencing RNA fate and is strongly associated with cell growth and developmental processes in many species.However,no information r... Evidence showed that N6-methyladenosine(m^(6)A)modification plays a pivotal role in influencing RNA fate and is strongly associated with cell growth and developmental processes in many species.However,no information regarding m^(6)A modification in Eimeria tenella is currently available.In the present study,we surveyed the transcriptome-wide prevalence of m^(6)A in sporulated oocysts and unsporulated oocysts of E.tenella.Methylated RNA immunoprecipitation sequencing(MeRIP-seq)analysis showed that m^(6)A modification was most abundant in the coding sequences,followed by stop codon.There were 3,903 hypermethylated and 3,178 hypomethylated mRNAs in sporulated oocysts compared with unsporulated oocysts.Further joint analysis suggested that m^(6)A modification of the majority of genes was positively correlated with mRNA expression.The mRNA relative expression and m^(6)A level of the selected genes were confirmed by quantitative reverse transcription PCR(RT-qPCR)and MeRIP-qPCR.GO and KEGG analysis indicated that differentially m^(6)A methylated genes(DMMGs)with significant differences in mRNA expression were closely related to processes such as regulation of gene expression,epigenetic,microtubule,autophagy-other and TOR signaling.Moreover,a total of 96 DMMGs without significant differences in mRNA expression showed significant differences at protein level.GO and pathway enrichment analysis of the 96 genes showed that RNA methylation may be involved in cell biosynthesis and metabolism of E.tenella.We firstly present a map of RNA m^(6)A modification in E.tenella,which provides significant insights into developmental biology of E.tenella. 展开更多
关键词 Eimeria tenella m^(6)A rna methylation MeRIP-seq rna-SEQ proteomic analysis
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Advances of N6-methyladenosine modification on circular RNA in hepatocellular carcinoma
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作者 CHU Feng-ran LIU Lu-zheng WU Jin-cai 《Journal of Hainan Medical University》 CAS 2024年第2期67-72,共6页
N6-methyladenosine(m6A)is a reversible epigenetic modification, which is one of the most abundant modifiers in eukaryotic cells and has been commonly reported in messenger RNAs and non-coding RNAs. The processing modi... N6-methyladenosine(m6A)is a reversible epigenetic modification, which is one of the most abundant modifiers in eukaryotic cells and has been commonly reported in messenger RNAs and non-coding RNAs. The processing modification of m6A regulates RNA transcription, processing, splicing, degradation, and translation, and plays an important role in the biological process of tumors. Circular RNA, which lacks the 5' cap structure, has been mistakenly regarded as a "junk sequence" generated by accidental shearing during the transcription process. However, it has been found that circRNAs can be involved in tumor invasion and metastasis through microRNAs, binding proteins, translated peptides, and m6A modifications. In this paper, we reviewed the role of m6A modifications in circRNA regulation and their functions in hepatocellular carcinoma and discussed their potential clinical applications and future development in this field. 展开更多
关键词 N6-methyladenosine Circular rna modification Hepatocellular carcinoma
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N^(6)-methyladenosine(m^(6)A)RNA modification in tumor immunity
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作者 Siyi Zheng Hui Han Shuibin Lin 《Cancer Biology & Medicine》 SCIE CAS CSCD 2022年第4期385-397,共13页
Growing evidence supports that cancer progression is closely associated with the tumor microenvironment and immune evasion.Importantly,recent studies have revealed the crucial roles of epigenetic regulators in shaping... Growing evidence supports that cancer progression is closely associated with the tumor microenvironment and immune evasion.Importantly,recent studies have revealed the crucial roles of epigenetic regulators in shaping the tumor microenvironment and restoring immune recognition.N^(6)-methyladenosine(m^(6)A)modification,the most prevalent epigenetic modification of mammalian mRNAs,has essential functions in regulating the processing and metabolism of its targeted RNAs,and therefore affects various biological processes including tumorigenesis and progression.Recent studies have demonstrated the critical functions and molecular mechanisms underlying abnormal m^(6)A modification in the regulation of tumor immunity.In this review,we summarize recent research progress in the potential roles of m^(6)A modification in tumor immunoregulation,with a special focus on the anti-tumor processes of immune cells and involvement in immune-associated molecules and pathways.Furthermore,we review current knowledge regarding the close correlation between m6A-related risk signatures and the tumor immune microenvironment landscape,and we discuss the prognostic value and therapeutic efficacy of m^(6)A regulators in a variety of cancer types. 展开更多
关键词 N^(6)-methyladenosine(m^(6)A)modification immune evasion tumor microenvironment(TME) tumor immunology immune cells
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Dysregulation of RNA modification systems in clinical populations with neurocognitive disorders 被引量:4
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作者 Helen M.Knight Merve DemirbugenÖz Adriana PerezGrovas-Saltijeral 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第6期1256-1261,共6页
The study of modified RNA known as epitranscriptomics has become increasingly relevant in our understanding of disease-modifying mechanisms.Methylation of N6 adenosine(m^(6)A)and C5 cytosine(m^(5)C)bases occur on mRNA... The study of modified RNA known as epitranscriptomics has become increasingly relevant in our understanding of disease-modifying mechanisms.Methylation of N6 adenosine(m^(6)A)and C5 cytosine(m^(5)C)bases occur on mRNAs,tRNA,mt-tRNA,and rRNA species as well as non-coding RNAs.With emerging knowledge of RNA binding proteins that act as writer,reader,and eraser effector proteins,comes a new understanding of physiological processes controlled by these systems.Such processes when spatiotemporally disrupted within cellular nanodomains in highly specialized tissues such as the brain,give rise to different forms of disease.In this review,we discuss accumulating evidence that changes in the m^(6)A and m^(5)C methylation systems contribute to neurocognitive disorders.Early studies first identified mutations within FMR1 to cause intellectual disability Fragile X syndromes several years before FMR1 was identified as an m^(6)A RNA reader protein.Subsequently,familial mutations within the m^(6)A writer gene METTL5,m^(5)C writer genes NSUN2,NSUN3,NSUN5,and NSUN6,as well as THOC2 and THOC6 that form a protein complex with the m^(5)C reader protein ALYREF,were recognized to cause intellectual development disorders.Similarly,differences in expression of the m^(5)C writer and reader effector proteins,NSUN6,NSUN7,and ALYREF in brain tissue are indicated in individuals with Alzheimer's disease,individuals with a high neuropathological load or have suffered traumatic brain injury.Likewise,an abundance of m^(6)A reader and anti-reader proteins are reported to change across brain regions in Lewy bodies diseases,Alzheimer's disease,and individuals with high cognitive reserve.m^(6)A-modified RNAs are also reported significantly more abundant in dementia with Lewy bodies brain tissue but significantly reduced in Parkinson's disease tissue,whilst modified RNAs are misplaced within diseased cells,particularly where synapses are located.In parahippocampal brain tissue,m^(6)A modification is enriched in transcripts associated with psychiatric disorders including conditions with clear cognitive deficits.These findings indicate a diverse set of molecular mechanisms are influenced by RNA methylation systems that can cause neuronal and synaptic dysfunction underlying neurocognitive disorders.Targeting these RNA modification systems brings new prospects for neural regenerative therapies. 展开更多
关键词 5-methylcytosine methylation Alzheimer's disease cognitive diseases epitranscriptomics intellectual disability Lewy body diseases N6 adenosine rna modification
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RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用机制
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作者 叶棣文 张炳杨 +2 位作者 张丹彤 马万山 逯素梅 《重庆医科大学学报》 CAS CSCD 北大核心 2024年第2期132-140,共9页
目的:探讨RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用及机制。方法:收集2型糖尿病患者术中赘余皮下脂肪组织,以非2型糖尿病患者同样组织为对照,检测组间RNA m^(6)A水平。高脂饮食诱导C57BL/6J小鼠构建胰岛素抵抗(in⁃sulin resis... 目的:探讨RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用及机制。方法:收集2型糖尿病患者术中赘余皮下脂肪组织,以非2型糖尿病患者同样组织为对照,检测组间RNA m^(6)A水平。高脂饮食诱导C57BL/6J小鼠构建胰岛素抵抗(in⁃sulin resistance,IR)模型(HFD组,n=5,60%高脂饲料喂养16周),对照组10%低脂饲料喂养16周(CD组,n=5)。模型构建成功后,取附睾周围脂肪组织行表观转录组学m^(6)A甲基化修饰芯片检测,并借助MeRIP-qPCR实验、RT-qPCR以及RNA结合蛋白免疫沉淀测定(RNA Binding Protein Immunoprecipitation Assay,RIP)实验验证胰岛素信号转导相关基因变化;进一步观察METTL3小分子抑制剂STM2457对高脂饮食诱导下小鼠胰岛素信号转导基因的影响。结果:2型糖尿病患者和小鼠IR模型脂肪组织中总体m^(6)A修饰水平均升高(患者200 ng RNA t=-8.375,P<0.001;患者100 ng RNA t=-3.722,P=0.006;患者50 ng RNA t=-4.937;P=0.001;小鼠100 ng RNA t=-3.590,P=0.023;小鼠50 ng RNA t=-2.760,P=0.025)。表观转录组学检测证实IR的脂肪组织中1175个基因发生高m^(6)A修饰,55个基因发生低m^(6)A修饰,同时有182个基因呈现高m^(6)A修饰且低表达,包括AKT2、INSR、PIK3R1、ACACA、SREBF1等5个胰岛素信号转导关键基因,其中AKT2、INSR、ACACA、SREBF1等4个基因被确证并证实其与METTL3存在直接结合,其m^(6)A修饰水平受METTL3正向调控。STM2457作用下,胰岛素敏感性提高,且AKT2、INSR、ACACA、SREBF1转录水平上调,提示IR表型改善明显。结论:高脂饮食通过METTL3诱导脂肪细胞胰岛素信号转导基因AKT2、INSR、ACACA、SREBF1发生m^(6)A高甲基化修饰,诱导其低表达,阻滞胰岛素信号转导,进而参与诱发IR。 展开更多
关键词 高脂饮食 胰岛素抵抗 rna m^(6)A甲基化修饰 胰岛素信号转导通路
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METTL3介导的PDK1 mRNA m^(6)A修饰通过Akt/mTOR信号通路促进肺上皮细胞增殖
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作者 靳艾 李梦宇 孙青竹 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2024年第7期934-946,共13页
腺苷N6-位点甲基化(m^(6)A)在细胞增殖过程中发挥重要作用。RNA甲基转移酶3(METTL3)作为催化m^(6)A关键酶,其介导m^(6)A修饰在肺上皮细胞增殖中的作用机制尚不明确。本研究旨在探讨METTL3介导m^(6)A修饰调控肺上皮细胞增殖的效应及机制... 腺苷N6-位点甲基化(m^(6)A)在细胞增殖过程中发挥重要作用。RNA甲基转移酶3(METTL3)作为催化m^(6)A关键酶,其介导m^(6)A修饰在肺上皮细胞增殖中的作用机制尚不明确。本研究旨在探讨METTL3介导m^(6)A修饰调控肺上皮细胞增殖的效应及机制。结果显示,在肺上皮细胞中敲低METTL 3显著抑制细胞生长,而过表达METTL3则促进了细胞增殖(P<0.05)。进一步的蛋白质免疫印迹结果显示,细胞生长和增殖的关键蛋白质PCNA在METTL 3敲降的肺上皮细胞中蛋白质水平的表达显著下调,并且Akt以及mTOR的磷酸化水平显著降低(P<0.05)。细胞免疫荧光结果发现,METTL 3敲降的肺上皮细胞中m^(6)A修饰水平显著降低(P<0.05)。实时荧光定量PCR及蛋白质免疫印迹结果表明,Akt-mTOR信号通路上游调控分子PDK1的mRNA和蛋白质表达水平在METTL 3敲降的肺上皮细胞中显著下降(P<0.05)。机制上,m^(6)A-IP-qPCR和RIP-qPCR结果进一步表明,METTL3催化PDK 1 mRNA的3′UTR区域m^(6)A修饰,进而被YTH N6-甲基腺苷RNA结合蛋白1(YTHDF1)识别,增强其mRNA的稳定性。总之,本研究揭示了METTL3通过增强PDK1 m^(6)A修饰,进而激活Akt-mTOR信号通路,促进细胞增殖。本研究为METTL3在上皮细胞增殖中的新角色提供了证据,同时为治疗肺上皮细胞损伤修复提供了新的治疗靶点。 展开更多
关键词 甲基转移酶3 rna m^(6)A修饰 细胞增殖 肺上皮细胞 磷酸肌醇依赖性蛋白激酶-1
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环状RNA的m^(6)A甲基化修饰及其在肿瘤中的研究进展
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作者 洪立辉 商谨晶 +2 位作者 董叶萍 王慧 杜来玲 《现代肿瘤医学》 CAS 2024年第2期363-370,共8页
环状RNA是一类广泛存在于生物体中的非编码RNA,具有较高的分子结构稳定性、高度保守性和表达特异性。N^(6)-甲基腺苷(N^(6)-methyladenosine,m^(6)A)是真核生物RNA中常见的修饰。大量的证据表明环状RNA和m^(6)A RNA甲基化修饰在肿瘤的... 环状RNA是一类广泛存在于生物体中的非编码RNA,具有较高的分子结构稳定性、高度保守性和表达特异性。N^(6)-甲基腺苷(N^(6)-methyladenosine,m^(6)A)是真核生物RNA中常见的修饰。大量的证据表明环状RNA和m^(6)A RNA甲基化修饰在肿瘤的发生和发展中起着至关重要的作用。本文叙述了环状RNA和m^(6)A RNA甲基化修饰的概念以及二者与肿瘤的联系,汇总了肿瘤相关的具有m^(6)A RNA甲基化修饰的环状RNA,并讨论了其在临床领域的应用前景,以期为肿瘤的早期诊断、临床治疗及预后预测方面提供新思路。 展开更多
关键词 肿瘤 环状rna m^(6)A rna甲基化 表观遗传学
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MeRIP-qPCR技术检测RNA m^(6)A甲基化修饰对t(8;21)AML细胞中KDM4B基因表达的调控作用
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作者 李雨晴 邵杨柳 +2 位作者 李梦月 王莉莉 高晓宁 《中国实验血液学杂志》 CAS CSCD 北大核心 2024年第2期382-388,共7页
目的:通过MeRIP联合逆转录实时定量PCR(RT-qPCR)技术,证明WTAP介导的RNA m^(6)A修饰对伴t(8;21)急性髓系白血病(AML)细胞中KDM4B基因的直接调控作用。方法:采用靶向WTAP或KDM4B基因的短发夹RNA(small hairpin RNA,shRNA)慢病毒载体沉默t... 目的:通过MeRIP联合逆转录实时定量PCR(RT-qPCR)技术,证明WTAP介导的RNA m^(6)A修饰对伴t(8;21)急性髓系白血病(AML)细胞中KDM4B基因的直接调控作用。方法:采用靶向WTAP或KDM4B基因的短发夹RNA(small hairpin RNA,shRNA)慢病毒载体沉默t(8;21)AML细胞系Kasumi-1和SKNO-1中WTAP或KDM4B基因表达,以转染随机打乱序列(scramble)的shRNA的细胞为对照。用超纯RNA提取试剂盒(DNaseⅠ)提取细胞RNA,Magna MeRIP^(TM)m^(6)A Kit试剂盒富集甲基化修饰片段,并通过RT-qPCR检测m^(6)A甲基化修饰的RNA区域;采用蛋白免疫印迹实验(Western blot)和逆转录实时定量PCR(RT-qPCR)技术检测细胞中WTAP、KDM4B蛋白和mRNA的表达水平。采用克隆形成实验检测细胞体外克隆形成能力。结果:沉默Kasumi-1细胞中WTAP的表达后,m^(6)A甲基化修饰在KDM4B mRNA 3’UTR的富集程度显著下降(P<0.01),沉默Kasumi-1和SKNO-1细胞中WTAP的表达可显著抑制KDM4B蛋白(P<0.001)和mRNA表达水平(Kasumi-1:P<0.001;SKNO-1:P<0.01)、细胞体外克隆形成能力下降(Kasumi-1:P<0.001;SKNO-1:P<0.01)。结论:t(8;21)AML细胞系中,WTAP通过调控KDM4B基因mRNA 3’UTR的m^(6)A修饰调控KDM4B的表达,沉默KDM4B表达可以抑制t(8;21)AML细胞增殖。 展开更多
关键词 MeRIP-qPCR 急性髓系白血病 t(8 21)染色体易位 KDM4B rna m^(6)A甲基化修饰
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RNA modification by M6A methylation in cardiovascular diseases: Current trends and future directions
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作者 Jinglin Wang Lingfeng Zha 《Frigid Zone Medicine》 2022年第3期158-177,共20页
N6-methyladenosine(M6A)is the most common modification in eukaryotic RNAs for the regulation of RNA transcription,processing,splicing,degradation,and translation.RNA modification by M6A is dynamically reversible,invol... N6-methyladenosine(M6A)is the most common modification in eukaryotic RNAs for the regulation of RNA transcription,processing,splicing,degradation,and translation.RNA modification by M6A is dynamically reversible,involving methylated transferase,demethylase,and methylated reading protein.M6A-mediated gene regulation involves cell differentiation,metastasis,apoptosis,and proliferation.Dysregulation of M6A can lead to various diseases.Cardiovascular disease(CVD)seriously endangers human health and brings great social burden.Seeking effective prevention and treatment strategies for CVD is a challenge to both fundamentalists and clinicians.Substantial evidence has suggested the key role of M6A modification in the development of CVDs.This review summarizes the mechanism of M6A RNA modification and the latest research progress in respect with its role in CVDs,including atherosclerosis,coronary artery disease,myocardial infarction and cardiac remodeling,myocardial ischemia-reperfusion injury,heart failure,hypertension,and aortic aneurysm,and the potential applications of the findings to CVDs,thereby providing new ideas and approaches for the diagnosis and therapy of CVDs. 展开更多
关键词 rna modification M6A methylation cardiovascular disease EPIGENETICS
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RNA m^(6)A甲基化修饰及其在家禽中的研究进展 被引量:2
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作者 吴艳 皮劲松 +5 位作者 张昊 蒲跃进 潘爱銮 黄涛 申杰 梁振华 《中国家禽》 北大核心 2021年第10期1-9,共9页
N6-甲基腺嘌呤(m^(6)A)是真核生物mRNA上含量最丰富的一种RNA修饰。近年来,随着m^(6)A甲基化修饰研究技术的不断发展,m^(6)A甲基化修饰调控的生物学功能得到了更深入的研究。文章综述了m^(6)A甲基化修饰的特点、调控机制、生物学功能及... N6-甲基腺嘌呤(m^(6)A)是真核生物mRNA上含量最丰富的一种RNA修饰。近年来,随着m^(6)A甲基化修饰研究技术的不断发展,m^(6)A甲基化修饰调控的生物学功能得到了更深入的研究。文章综述了m^(6)A甲基化修饰的特点、调控机制、生物学功能及其在家禽中的研究进展,以期为进一步解析m^(6)A甲基化修饰在家禽生长发育、繁殖等方面的作用提供理论依据。 展开更多
关键词 rna修饰 m^(6)A 家禽 生长发育 繁殖
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m^(6)A RNA甲基化修饰因子在肝癌中作用的研究进展 被引量:2
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作者 童汪霞 罗宁 《现代肿瘤医学》 CAS 北大核心 2022年第14期2632-2638,共7页
m^(6)A RNA甲基化是一种重要的表观遗传修饰,这种转录后的RNA修饰是受甲基化酶、去甲基化酶和识别m^(6)A修饰的蛋白质调控的动态和可逆的过程。m^(6)A参与了真核生物RNA代谢的各个方面,包括mRNA前剪接、3'端加工、核输出、翻译调节... m^(6)A RNA甲基化是一种重要的表观遗传修饰,这种转录后的RNA修饰是受甲基化酶、去甲基化酶和识别m^(6)A修饰的蛋白质调控的动态和可逆的过程。m^(6)A参与了真核生物RNA代谢的各个方面,包括mRNA前剪接、3'端加工、核输出、翻译调节、mRNA衰变和非编码RNA(ncRNA)加工。已有较多的证据表明m^(6)A因子的异常表达或功能异常与肝癌的发生和进展有关,但仍有部分m^(6)A甲基化修饰因子在肝癌中的作用机制未明。本文就m^(6)A甲基化修饰因子在肝癌中的作用进行了系统回顾,归纳了m^(6)A因子在肝癌中的作用机制及其对预后的影响,总结了目前研究尚不充分的领域。该研究为开展下一阶段的m^(6)A甲基化修饰在肝癌中的机制研究提供借鉴。 展开更多
关键词 m^(6)A rna甲基化 肝癌 研究进展
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m^(6)A修饰对药物代谢酶和药物转运体的调控作用 被引量:2
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作者 赵世宇 刘帅兵 +1 位作者 王月琴 田鑫 《中国药理学通报》 CAS CSCD 北大核心 2024年第7期1221-1225,共5页
m^(6)A修饰是RNA甲基化修饰中最丰富的一种修饰,受甲基转移酶和去甲基化酶的动态调控,被m^(6)A识别蛋白识别并结合后可影响mRNA的剪切、稳定性和翻译等生物学过程来调控靶基因的表达。最近的研究发现,m^(6)A修饰可通过多种途径来调控药... m^(6)A修饰是RNA甲基化修饰中最丰富的一种修饰,受甲基转移酶和去甲基化酶的动态调控,被m^(6)A识别蛋白识别并结合后可影响mRNA的剪切、稳定性和翻译等生物学过程来调控靶基因的表达。最近的研究发现,m^(6)A修饰可通过多种途径来调控药物代谢酶和药物转运体表达,进而影响机体对药物的代谢速率或影响细胞中的药物浓度,最终导致药物治疗效果发生变化。该文综述了m^(6)A修饰调控药物代谢酶和药物转运体分子机制的研究进展,以期为临床上的合理用药、个体化用药提供新思路。 展开更多
关键词 rna甲基化 m^(6)A修饰 药物代谢酶 药物转运体 调控机制 研究进展
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m^6A RNA甲基化在非小细胞肺癌中的研究进展 被引量:9
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作者 潘红丽 李雪冰 +2 位作者 陈琛 范亚光 周清华 《中国肺癌杂志》 CAS CSCD 北大核心 2020年第11期961-969,共9页
m^6A修饰是真核生物mRNA中最丰富的修饰之一,该过程受m^6A甲基转移酶和去甲基化酶的共同调控。m^6A修饰后的RNA能够被m^6A识别蛋白特异性识别并结合,进而介导RNA的剪接、成熟、出核、降解和翻译等。目前国内外对于m^6A修饰及其相关蛋白... m^6A修饰是真核生物mRNA中最丰富的修饰之一,该过程受m^6A甲基转移酶和去甲基化酶的共同调控。m^6A修饰后的RNA能够被m^6A识别蛋白特异性识别并结合,进而介导RNA的剪接、成熟、出核、降解和翻译等。目前国内外对于m^6A修饰及其相关蛋白如何参与非小细胞肺癌发生发展的研究,主要集中于细胞恶性增殖、迁移、侵袭、转移和耐药等方面。m^6A修饰相关蛋白在肺癌组织标本和血液循环肿瘤细胞(circulating tumor cell, CTC)中表达异常,有望成为肺癌诊断和预后判断的潜在分子标志物。本文围绕m^6A修饰相关蛋白的组成、作用方式、在非小细胞肺癌恶性进展中的生物学功能,以及针对m^6A修饰的靶向治疗等方面的研究进展进行综述,旨在为非小细胞肺癌的早期临床诊断和靶向药物的开发提供新思路。 展开更多
关键词 肺肿瘤 m^6A修饰 rna甲基化 表观遗传修饰
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m^(6)A相关基因在激素性股骨头坏死中的生物信息学分析 被引量:2
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作者 令狐熙涛 桂佳琦 +2 位作者 梁卓智 瓦庆德 黄帅 《中国组织工程研究》 CAS 北大核心 2024年第36期5811-5816,共6页
背景:m^(6)A修饰与股骨头坏死的发生发展相关,但在激素性股骨头坏死中的作用尚不清楚。目的:基于GEO数据库,采用生物信息学方法分析激素性股骨头坏死中表达差异的m^(6)A基因及互作miRNAs,探寻其潜在发病机制。方法:在GEO数据库中检索并... 背景:m^(6)A修饰与股骨头坏死的发生发展相关,但在激素性股骨头坏死中的作用尚不清楚。目的:基于GEO数据库,采用生物信息学方法分析激素性股骨头坏死中表达差异的m^(6)A基因及互作miRNAs,探寻其潜在发病机制。方法:在GEO数据库中检索并下载与激素性股骨头坏死相关的mRNA表达谱数据集(GSE123568),通过R软件对数据集进行差异基因筛选及GO功能、KEGG通路富集分析。识别差异基因中的m^(6)A差异表达基因(m^(6)A-DEGs)并对其进行GO功能与KEGG通路富集分析,比较m^(6)A-DEGs的表达量并分析它们之间的相关性。最后通过Cytoscape构建m^(6)A-DEGs的PPI互作网络及筛选核心基因。使用TargetScan,miRTarBase和miRBD数据库预测m^(6)A-DEGs相关的潜在miRNAs,同时使用ChIPBase及hTFtarget数据库预测7个核心基因潜在转录因子,然后分别构建m^(6)A-miRNA与转录因子m^(6)A调控网络。最后使用数据集GSE74089验证7个核心m^(6)A-DEGs的表达水平。结果与结论:①从数据集中共筛选出2460个差异表达的基因,其中1455个上调,1005个下调。②从数据集中筛选出了14个m^(6)A-DEGs,包括3个下调和11个上调基因,m^(6)A-DEGs在激素性股骨头坏死中的表达具有显著差异(P<0.05),Spearman分析表明它们之间具有一定相关性。③m^(6)A-DEGs的GO和KEGG富集分析主要集中在骨髓细胞分化与发育、免疫受体与细胞因子受体活性、破骨细胞分化、AMPK与白细胞介素17信号通路。④m^(6)A-DEGs前7个核心基因包括YTHDF3,YTHDF1,YTHDF2,ALKBH5,METTL3,HNRNPA2B1及HNRNPC,它们在miRTarBase,miRDB和TargetScan数据库中共有44个miRNA重叠,在ChIPBase及hTFtarget数据库中共有79个重叠转录因子。⑤在GSE74089数据集中有6个核心m^(6)A-DEGs的表达水平与GSE123568数据集一致。⑥结果证实,根据生物信息学方法筛选的7个m^(6)A-DEGs可能通过调控多个miRNA、转录因子和AMPK及白细胞介素17信号通路表达,进而影响激素性股骨头坏死中骨髓细胞分化发育与破骨细胞分化,为进一步深入研究激素性股骨头坏死的发病机制和靶向治疗提供了数据支持和研究方向。 展开更多
关键词 激素性股骨头坏死 m^(6)A甲基化 微小rna 转录因子 生物信息学 差异基因 基因调控网络 核心基因
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RNA m^(6)A甲基化修饰参与及调控骨科相关疾病 被引量:4
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作者 陈伟坚 张罡瑜 +2 位作者 林天烨 梁笃 王海彬 《中国组织工程研究》 CAS 北大核心 2021年第26期4236-4242,共7页
背景:随着高通量测序技术的发展,研究发现骨髓间充质干细胞、成骨细胞、脂肪细胞、破骨细胞、软骨细胞和骨肉瘤细胞等均可检测到m^(6)A修饰的存在,m^(6)A修饰可通过调控细胞RNA水平的甲基化,影响相关基因的mRNA和(或)非编码RNA的翻译等... 背景:随着高通量测序技术的发展,研究发现骨髓间充质干细胞、成骨细胞、脂肪细胞、破骨细胞、软骨细胞和骨肉瘤细胞等均可检测到m^(6)A修饰的存在,m^(6)A修饰可通过调控细胞RNA水平的甲基化,影响相关基因的mRNA和(或)非编码RNA的翻译等过程,从而激活细胞信号转导通路,影响细胞的增殖、分化、迁移、侵袭、凋亡及DNA损伤修复等,进而调控骨骼发育、关节退变、骨折愈合及骨肿瘤的发生、发展等生理病理过程。目的:总结近年来m^(6)A修饰在骨质疏松症、骨关节炎等骨科疾病中的最新研究成果和作用机制,为开发骨科相关疾病的新型治疗策略提供启发。方法:以中文关键词“N6-甲基腺嘌呤,骨质疏松症,骨关节炎,骨科疾病”检索CNKI数据库,以英文关键词“m^(6)A,osteoporosis,osteoarthritis,orthopedic disease”检索PubMed数据库,全网检索自建库至2020年6月有关m^(6)A修饰在骨科疾病中研究成果的文献,严格按照纳入和排除标准筛选,最后选定61篇文献进行综述。结果与结论:①在骨质疏松症进展过程中,METTL3/m^(6)A介导的RNA甲基化以及FTO/m^(6)A介导的RNA去甲基化动态调控相关基因的表达,进一步影响相关信号通路的激活,影响骨髓间充质干细胞的成骨及成脂分化;②METTL3/m^(6)A通过调节软骨细胞中的核因子κB信号传导和细胞外基质合成,在骨关节炎进展中“扮演”了重要的角色;③METTL3/m^(6)A通过靶向调控成骨细胞相关的miR-7212-5p来抑制骨折愈合过程中的成骨机制;④METTL3通过调节淋巴增强因子1的m^(6)A水平从而激活Wnt/β-catenin信号以及通过调节ATAD2基因的m^(6)A甲基化来加速骨肉瘤的恶化;⑤在骨质疏松症、骨关节炎等骨科疾病中,m^(6)A修饰均参与了多系统疾病的进程,m^(6)A修饰的深入研究为进一步了解骨科相关疾病的发病机制提供了理论依据,并提供了基于表观遗传学基础的骨科疾病治疗思路以及参考依据。 展开更多
关键词 rna m^(6)A修饰 m^(6)A修饰酶系统 骨骼发育 成骨 脂肪 软骨 骨质疏松症 骨关节炎 骨肉瘤
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m^(6)A修饰调控细胞自噬参与雄性生殖疾病研究进展
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作者 彭芃 戚星宇 +1 位作者 袁峥嵘 马毅 《生命科学研究》 CAS 2024年第1期41-47,70,共8页
N^(6)-甲基腺苷(N^(6)-methyladenosine, m^(6)A)修饰是在腺苷核苷酸N^(6)位置上发生的甲基化,在多种RNA代谢过程如m RNA剪接、翻译、运输、降解中发挥关键作用,进而对各种生命过程产生广泛影响。细胞自噬是真核细胞在自噬相关基因的调... N^(6)-甲基腺苷(N^(6)-methyladenosine, m^(6)A)修饰是在腺苷核苷酸N^(6)位置上发生的甲基化,在多种RNA代谢过程如m RNA剪接、翻译、运输、降解中发挥关键作用,进而对各种生命过程产生广泛影响。细胞自噬是真核细胞在自噬相关基因的调控下通过溶酶体对自身细胞质蛋白质和受损细胞器进行降解的过程。本文总结了m^(6)A修饰调控细胞自噬在雄性生殖疾病发生发展过程中的研究进展,旨在为今后m^(6)A修饰调节自噬水平在雄性生殖中的调控机理研究提供参考资料,为雄性生殖疾病的治疗策略提供新方向。 展开更多
关键词 N^(6)-甲基腺苷(m^(6)A)修饰 rna修饰 细胞自噬 雄性生殖疾病 男性不育
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小鼠脑缺血再灌注损伤模型中circRNA的m^(6)A修饰及表达谱分析 被引量:3
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作者 安小琼 谢鹏 +2 位作者 朱晓西 龙婷婷 禹文峰 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2022年第10期1403-1417,共15页
本研究通过甲基化RNA免疫沉淀测序(methylated RNA immunoprecipitation sequencing,MeRIP-seq)、转录物组测序(transcriptome sequencing,RNA-seq)及生物信息学技术,分析小鼠大脑中动脉栓塞/再灌注(middle cerebral artery occlusion/r... 本研究通过甲基化RNA免疫沉淀测序(methylated RNA immunoprecipitation sequencing,MeRIP-seq)、转录物组测序(transcriptome sequencing,RNA-seq)及生物信息学技术,分析小鼠大脑中动脉栓塞/再灌注(middle cerebral artery occlusion/reperfusion,MCAO/R)模型中环状RNA (circular RNA,circRNA)差异表达谱和m^(6)A修饰差异表达谱,为揭示circRNA表观遗传修饰与脑缺血再灌注损伤之间关系提供科学依据。采用Longa生物学评分评价小鼠神经功能缺损,TTC染色法计算小鼠脑梗死体积,Dot印迹检测m^(6)A整体甲基化水平。结果显示,MCAO/R组与sham组相比出现严重神经损伤,Longa生物学评分为(2.75±0.25)分,MCAO/R组的梗死体积显著高于sham组,所占百分比为(27.63%±4.24%),MCAO/R组m^(6)A整体修饰水平增加。与sham组相比,MCAO/R组有1 787个差异表达的circRNAs(|log_(2)FC|> 0.58,P<0.05)。其中,852个circRNA表达显著上调,935个circRNAs表达显著下调。基因本体(gene ontgology,GO)功能分析显示,差异表达circRNAs靶基因主要参与翻译、蛋白质糖基化、激素应答、IL-6介导的信号通路、高尔基体、内质网等生物学过程;京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)通路分析发现,差异靶基因主要与N-聚糖生物合成、Wnt信号通路、胃酸分泌、谷氨酸能突触、磷脂酶D信号通路、味觉传导、非洲锥虫病、甲状腺激素合成、胰岛素分泌等代谢途径和信号通路有关。与sham组比,MCAO/R组有22个circRNAs发生m^(6)A甲基化修饰差异(|log_(2)FC|> 0.58,P<0.05)。其中,14个circRNA显著上调,8个circRNA显著下调。GO和KEGG分析显示,差异甲基化circRNA主要与胞嘧啶代谢过程、骨骼肌收缩、髓样细胞分化、O-连接蛋白质糖基化等生物学过程有关,主要富集到范科尼贫血途径通路。最后,联合表达差异和m^(6)A修饰差异进行分析,共筛选到7个共表达差异(既有m^(6)A修饰差异,又有表达差异)的circRNA,经RT-qPCR验证,这些共表达差异circRNA表达趋势与测序一致。本研究通过对sham组和MCAO/R组测序分析,筛选有差异表达的circRNA和有m^(6)A修饰差异的circRNA,表明脑缺血再灌注可引起小鼠circRNA表达谱及m^(6)A修饰谱改变,差异表达的circRNA和差异甲基化circRNA靶基因涉及多种通路,为从表观遗传水平揭示脑缺血再灌注损伤的分子机制奠定基础,为后续研究脑缺血再灌注损伤提供了潜在的靶向位点。 展开更多
关键词 大脑中动脉栓塞/再灌注 m^(6)A甲基化 高通量测序 环状rna
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m^(6)A甲基化修饰在眼科疾病中的研究进展
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作者 薛愚愚 刘春梦 +1 位作者 陈婕 叶河江 《国际眼科杂志》 CAS 2024年第4期589-595,共7页
N6-甲基腺苷(m^(6)A)是真核细胞中最普遍、最丰富和最保守的RNA内部修饰方式。m^(6)A修饰主要通过m^(6)A甲基转移酶、m^(6)A去甲基化酶和m^(6)A甲基化识别蛋白调节RNA的剪接、稳定性、输出、降解和翻译等。近年来的研究发现,m^(6)A甲基... N6-甲基腺苷(m^(6)A)是真核细胞中最普遍、最丰富和最保守的RNA内部修饰方式。m^(6)A修饰主要通过m^(6)A甲基转移酶、m^(6)A去甲基化酶和m^(6)A甲基化识别蛋白调节RNA的剪接、稳定性、输出、降解和翻译等。近年来的研究发现,m^(6)A甲基化异常可能介导眼部的多种病理过程,参与代谢性、炎症性、退行性眼病和眼部肿瘤的发生发展,如糖尿病视网膜病变、白内障、年龄相关性黄斑变性、葡萄膜黑色素瘤等。本文就m^(6)A甲基化修饰在眼部组织细胞和眼科疾病中的作用进行综述,阐明m^(6)A甲基化在眼病中的潜在分子机制,可能为某些眼科疾病的患者提供新的治疗思路。 展开更多
关键词 N6-甲基腺苷(m^(6)A) rna甲基化 糖尿病视网膜病变 白内障 年龄相关性黄斑变性 葡萄膜黑色素瘤
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