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New insights into developmental biology of Eimeria tenella revealed by comparative analysis of mRNA N6-methyladenosine modification between unsporulated oocysts and sporulated oocysts
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作者 Qing Liu Bingjin Mu +7 位作者 Yijing Meng Linmei Yu Zirui Wang Tao Jia Wenbin Zheng Wenwei Gao Shichen Xie Xingquan Zhu 《Journal of Integrative Agriculture》 SCIE CSCD 2024年第1期239-250,共12页
Evidence showed that N6-methyladenosine(m^(6)A)modification plays a pivotal role in influencing RNA fate and is strongly associated with cell growth and developmental processes in many species.However,no information r... Evidence showed that N6-methyladenosine(m^(6)A)modification plays a pivotal role in influencing RNA fate and is strongly associated with cell growth and developmental processes in many species.However,no information regarding m^(6)A modification in Eimeria tenella is currently available.In the present study,we surveyed the transcriptome-wide prevalence of m^(6)A in sporulated oocysts and unsporulated oocysts of E.tenella.Methylated RNA immunoprecipitation sequencing(MeRIP-seq)analysis showed that m^(6)A modification was most abundant in the coding sequences,followed by stop codon.There were 3,903 hypermethylated and 3,178 hypomethylated mRNAs in sporulated oocysts compared with unsporulated oocysts.Further joint analysis suggested that m^(6)A modification of the majority of genes was positively correlated with mRNA expression.The mRNA relative expression and m^(6)A level of the selected genes were confirmed by quantitative reverse transcription PCR(RT-qPCR)and MeRIP-qPCR.GO and KEGG analysis indicated that differentially m^(6)A methylated genes(DMMGs)with significant differences in mRNA expression were closely related to processes such as regulation of gene expression,epigenetic,microtubule,autophagy-other and TOR signaling.Moreover,a total of 96 DMMGs without significant differences in mRNA expression showed significant differences at protein level.GO and pathway enrichment analysis of the 96 genes showed that RNA methylation may be involved in cell biosynthesis and metabolism of E.tenella.We firstly present a map of RNA m^(6)A modification in E.tenella,which provides significant insights into developmental biology of E.tenella. 展开更多
关键词 Eimeria tenella m^(6)A rna methylation MeRIP-seq rna-SEQ proteomic analysis
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Enhancing m^(6)A modification in the motor cortex facilitates corticospinal tract remodeling after spinal cord injury
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作者 Tian Qin Yuxin Jin +5 位作者 Yiming Qin Feifei Yuan Hongbin Lu Jianzhong Hu Yong Cao Chengjun Li 《Neural Regeneration Research》 SCIE CAS 2025年第6期1749-1763,共15页
Spinal cord injury typically causes corticospinal tract disruption. Although the disrupted corticospinal tract can self-regenerate to a certain degree, the underlying mechanism of this process is still unclear. N6-met... Spinal cord injury typically causes corticospinal tract disruption. Although the disrupted corticospinal tract can self-regenerate to a certain degree, the underlying mechanism of this process is still unclear. N6-methyladenosine(m^(6)A) modifications are the most common form of epigenetic regulation at the RNA level and play an essential role in biological processes. However, whether m^(6)A modifications participate in corticospinal tract regeneration after spinal cord injury remains unknown. We found that expression of methyltransferase 14 protein(METTL14) in the locomotor cortex was high after spinal cord injury and accompanied by elevated m^(6)A levels. Knockdown of Mettl14 in the locomotor cortex was not favorable for corticospinal tract regeneration and neurological recovery after spinal cord injury. Through bioinformatics analysis and methylated RNA immunoprecipitation-quantitative polymerase chain reaction, we found that METTL14 regulated Trib2 expression in an m^(6)A-regulated manner, thereby activating the mitogen-activated protein kinase pathway and promoting corticospinal tract regeneration. Finally, we administered syringin, a stabilizer of METTL14, using molecular docking. Results confirmed that syringin can promote corticospinal tract regeneration and facilitate neurological recovery by stabilizing METTL14. Findings from this study reveal that m^(6)A modification is involved in the regulation of corticospinal tract regeneration after spinal cord injury. 展开更多
关键词 corticospinal tract remodeling epigenetic regulations locomotor cortex m^(6)A modification methyltransferase 14 protein(METTL14) mitogen-activated protein kinase neural regeneration spinal cord injury SYRINGIN TRIB2
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Advances of N6-methyladenosine modification on circular RNA in hepatocellular carcinoma
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作者 CHU Feng-ran LIU Lu-zheng WU Jin-cai 《Journal of Hainan Medical University》 CAS 2024年第2期67-72,共6页
N6-methyladenosine(m6A)is a reversible epigenetic modification, which is one of the most abundant modifiers in eukaryotic cells and has been commonly reported in messenger RNAs and non-coding RNAs. The processing modi... N6-methyladenosine(m6A)is a reversible epigenetic modification, which is one of the most abundant modifiers in eukaryotic cells and has been commonly reported in messenger RNAs and non-coding RNAs. The processing modification of m6A regulates RNA transcription, processing, splicing, degradation, and translation, and plays an important role in the biological process of tumors. Circular RNA, which lacks the 5' cap structure, has been mistakenly regarded as a "junk sequence" generated by accidental shearing during the transcription process. However, it has been found that circRNAs can be involved in tumor invasion and metastasis through microRNAs, binding proteins, translated peptides, and m6A modifications. In this paper, we reviewed the role of m6A modifications in circRNA regulation and their functions in hepatocellular carcinoma and discussed their potential clinical applications and future development in this field. 展开更多
关键词 N6-methyladenosine Circular rna modification Hepatocellular carcinoma
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RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用机制
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作者 叶棣文 张炳杨 +2 位作者 张丹彤 马万山 逯素梅 《重庆医科大学学报》 CAS CSCD 北大核心 2024年第2期132-140,共9页
目的:探讨RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用及机制。方法:收集2型糖尿病患者术中赘余皮下脂肪组织,以非2型糖尿病患者同样组织为对照,检测组间RNA m^(6)A水平。高脂饮食诱导C57BL/6J小鼠构建胰岛素抵抗(in⁃sulin resis... 目的:探讨RNA m^(6)A甲基化修饰在脂肪细胞胰岛素抵抗中的作用及机制。方法:收集2型糖尿病患者术中赘余皮下脂肪组织,以非2型糖尿病患者同样组织为对照,检测组间RNA m^(6)A水平。高脂饮食诱导C57BL/6J小鼠构建胰岛素抵抗(in⁃sulin resistance,IR)模型(HFD组,n=5,60%高脂饲料喂养16周),对照组10%低脂饲料喂养16周(CD组,n=5)。模型构建成功后,取附睾周围脂肪组织行表观转录组学m^(6)A甲基化修饰芯片检测,并借助MeRIP-qPCR实验、RT-qPCR以及RNA结合蛋白免疫沉淀测定(RNA Binding Protein Immunoprecipitation Assay,RIP)实验验证胰岛素信号转导相关基因变化;进一步观察METTL3小分子抑制剂STM2457对高脂饮食诱导下小鼠胰岛素信号转导基因的影响。结果:2型糖尿病患者和小鼠IR模型脂肪组织中总体m^(6)A修饰水平均升高(患者200 ng RNA t=-8.375,P<0.001;患者100 ng RNA t=-3.722,P=0.006;患者50 ng RNA t=-4.937;P=0.001;小鼠100 ng RNA t=-3.590,P=0.023;小鼠50 ng RNA t=-2.760,P=0.025)。表观转录组学检测证实IR的脂肪组织中1175个基因发生高m^(6)A修饰,55个基因发生低m^(6)A修饰,同时有182个基因呈现高m^(6)A修饰且低表达,包括AKT2、INSR、PIK3R1、ACACA、SREBF1等5个胰岛素信号转导关键基因,其中AKT2、INSR、ACACA、SREBF1等4个基因被确证并证实其与METTL3存在直接结合,其m^(6)A修饰水平受METTL3正向调控。STM2457作用下,胰岛素敏感性提高,且AKT2、INSR、ACACA、SREBF1转录水平上调,提示IR表型改善明显。结论:高脂饮食通过METTL3诱导脂肪细胞胰岛素信号转导基因AKT2、INSR、ACACA、SREBF1发生m^(6)A高甲基化修饰,诱导其低表达,阻滞胰岛素信号转导,进而参与诱发IR。 展开更多
关键词 高脂饮食 胰岛素抵抗 rna m^(6)A甲基化修饰 胰岛素信号转导通路
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METTL3介导的PDK1 mRNA m^(6)A修饰通过Akt/mTOR信号通路促进肺上皮细胞增殖
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作者 靳艾 李梦宇 孙青竹 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2024年第7期934-946,共13页
腺苷N6-位点甲基化(m^(6)A)在细胞增殖过程中发挥重要作用。RNA甲基转移酶3(METTL3)作为催化m^(6)A关键酶,其介导m^(6)A修饰在肺上皮细胞增殖中的作用机制尚不明确。本研究旨在探讨METTL3介导m^(6)A修饰调控肺上皮细胞增殖的效应及机制... 腺苷N6-位点甲基化(m^(6)A)在细胞增殖过程中发挥重要作用。RNA甲基转移酶3(METTL3)作为催化m^(6)A关键酶,其介导m^(6)A修饰在肺上皮细胞增殖中的作用机制尚不明确。本研究旨在探讨METTL3介导m^(6)A修饰调控肺上皮细胞增殖的效应及机制。结果显示,在肺上皮细胞中敲低METTL 3显著抑制细胞生长,而过表达METTL3则促进了细胞增殖(P<0.05)。进一步的蛋白质免疫印迹结果显示,细胞生长和增殖的关键蛋白质PCNA在METTL 3敲降的肺上皮细胞中蛋白质水平的表达显著下调,并且Akt以及mTOR的磷酸化水平显著降低(P<0.05)。细胞免疫荧光结果发现,METTL 3敲降的肺上皮细胞中m^(6)A修饰水平显著降低(P<0.05)。实时荧光定量PCR及蛋白质免疫印迹结果表明,Akt-mTOR信号通路上游调控分子PDK1的mRNA和蛋白质表达水平在METTL 3敲降的肺上皮细胞中显著下降(P<0.05)。机制上,m^(6)A-IP-qPCR和RIP-qPCR结果进一步表明,METTL3催化PDK 1 mRNA的3′UTR区域m^(6)A修饰,进而被YTH N6-甲基腺苷RNA结合蛋白1(YTHDF1)识别,增强其mRNA的稳定性。总之,本研究揭示了METTL3通过增强PDK1 m^(6)A修饰,进而激活Akt-mTOR信号通路,促进细胞增殖。本研究为METTL3在上皮细胞增殖中的新角色提供了证据,同时为治疗肺上皮细胞损伤修复提供了新的治疗靶点。 展开更多
关键词 甲基转移酶3 rna m^(6)A修饰 细胞增殖 肺上皮细胞 磷酸肌醇依赖性蛋白激酶-1
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环状RNA的m^(6)A甲基化修饰及其在肿瘤中的研究进展
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作者 洪立辉 商谨晶 +2 位作者 董叶萍 王慧 杜来玲 《现代肿瘤医学》 CAS 2024年第2期363-370,共8页
环状RNA是一类广泛存在于生物体中的非编码RNA,具有较高的分子结构稳定性、高度保守性和表达特异性。N^(6)-甲基腺苷(N^(6)-methyladenosine,m^(6)A)是真核生物RNA中常见的修饰。大量的证据表明环状RNA和m^(6)A RNA甲基化修饰在肿瘤的... 环状RNA是一类广泛存在于生物体中的非编码RNA,具有较高的分子结构稳定性、高度保守性和表达特异性。N^(6)-甲基腺苷(N^(6)-methyladenosine,m^(6)A)是真核生物RNA中常见的修饰。大量的证据表明环状RNA和m^(6)A RNA甲基化修饰在肿瘤的发生和发展中起着至关重要的作用。本文叙述了环状RNA和m^(6)A RNA甲基化修饰的概念以及二者与肿瘤的联系,汇总了肿瘤相关的具有m^(6)A RNA甲基化修饰的环状RNA,并讨论了其在临床领域的应用前景,以期为肿瘤的早期诊断、临床治疗及预后预测方面提供新思路。 展开更多
关键词 肿瘤 环状rna m^(6)A rna甲基化 表观遗传学
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MeRIP-qPCR技术检测RNA m^(6)A甲基化修饰对t(8;21)AML细胞中KDM4B基因表达的调控作用
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作者 李雨晴 邵杨柳 +2 位作者 李梦月 王莉莉 高晓宁 《中国实验血液学杂志》 CAS CSCD 北大核心 2024年第2期382-388,共7页
目的:通过MeRIP联合逆转录实时定量PCR(RT-qPCR)技术,证明WTAP介导的RNA m^(6)A修饰对伴t(8;21)急性髓系白血病(AML)细胞中KDM4B基因的直接调控作用。方法:采用靶向WTAP或KDM4B基因的短发夹RNA(small hairpin RNA,shRNA)慢病毒载体沉默t... 目的:通过MeRIP联合逆转录实时定量PCR(RT-qPCR)技术,证明WTAP介导的RNA m^(6)A修饰对伴t(8;21)急性髓系白血病(AML)细胞中KDM4B基因的直接调控作用。方法:采用靶向WTAP或KDM4B基因的短发夹RNA(small hairpin RNA,shRNA)慢病毒载体沉默t(8;21)AML细胞系Kasumi-1和SKNO-1中WTAP或KDM4B基因表达,以转染随机打乱序列(scramble)的shRNA的细胞为对照。用超纯RNA提取试剂盒(DNaseⅠ)提取细胞RNA,Magna MeRIP^(TM)m^(6)A Kit试剂盒富集甲基化修饰片段,并通过RT-qPCR检测m^(6)A甲基化修饰的RNA区域;采用蛋白免疫印迹实验(Western blot)和逆转录实时定量PCR(RT-qPCR)技术检测细胞中WTAP、KDM4B蛋白和mRNA的表达水平。采用克隆形成实验检测细胞体外克隆形成能力。结果:沉默Kasumi-1细胞中WTAP的表达后,m^(6)A甲基化修饰在KDM4B mRNA 3’UTR的富集程度显著下降(P<0.01),沉默Kasumi-1和SKNO-1细胞中WTAP的表达可显著抑制KDM4B蛋白(P<0.001)和mRNA表达水平(Kasumi-1:P<0.001;SKNO-1:P<0.01)、细胞体外克隆形成能力下降(Kasumi-1:P<0.001;SKNO-1:P<0.01)。结论:t(8;21)AML细胞系中,WTAP通过调控KDM4B基因mRNA 3’UTR的m^(6)A修饰调控KDM4B的表达,沉默KDM4B表达可以抑制t(8;21)AML细胞增殖。 展开更多
关键词 MeRIP-qPCR 急性髓系白血病 t(8 21)染色体易位 KDM4B rna m^(6)A甲基化修饰
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m^(6)A修饰对药物代谢酶和药物转运体的调控作用
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作者 赵世宇 刘帅兵 +1 位作者 王月琴 田鑫 《中国药理学通报》 CAS CSCD 北大核心 2024年第7期1221-1225,共5页
m^(6)A修饰是RNA甲基化修饰中最丰富的一种修饰,受甲基转移酶和去甲基化酶的动态调控,被m^(6)A识别蛋白识别并结合后可影响mRNA的剪切、稳定性和翻译等生物学过程来调控靶基因的表达。最近的研究发现,m^(6)A修饰可通过多种途径来调控药... m^(6)A修饰是RNA甲基化修饰中最丰富的一种修饰,受甲基转移酶和去甲基化酶的动态调控,被m^(6)A识别蛋白识别并结合后可影响mRNA的剪切、稳定性和翻译等生物学过程来调控靶基因的表达。最近的研究发现,m^(6)A修饰可通过多种途径来调控药物代谢酶和药物转运体表达,进而影响机体对药物的代谢速率或影响细胞中的药物浓度,最终导致药物治疗效果发生变化。该文综述了m^(6)A修饰调控药物代谢酶和药物转运体分子机制的研究进展,以期为临床上的合理用药、个体化用药提供新思路。 展开更多
关键词 rna甲基化 m^(6)A修饰 药物代谢酶 药物转运体 调控机制 研究进展
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m^(6)A修饰调控细胞自噬参与雄性生殖疾病研究进展
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作者 彭芃 戚星宇 +1 位作者 袁峥嵘 马毅 《生命科学研究》 CAS 2024年第1期41-47,70,共8页
N^(6)-甲基腺苷(N^(6)-methyladenosine, m^(6)A)修饰是在腺苷核苷酸N^(6)位置上发生的甲基化,在多种RNA代谢过程如m RNA剪接、翻译、运输、降解中发挥关键作用,进而对各种生命过程产生广泛影响。细胞自噬是真核细胞在自噬相关基因的调... N^(6)-甲基腺苷(N^(6)-methyladenosine, m^(6)A)修饰是在腺苷核苷酸N^(6)位置上发生的甲基化,在多种RNA代谢过程如m RNA剪接、翻译、运输、降解中发挥关键作用,进而对各种生命过程产生广泛影响。细胞自噬是真核细胞在自噬相关基因的调控下通过溶酶体对自身细胞质蛋白质和受损细胞器进行降解的过程。本文总结了m^(6)A修饰调控细胞自噬在雄性生殖疾病发生发展过程中的研究进展,旨在为今后m^(6)A修饰调节自噬水平在雄性生殖中的调控机理研究提供参考资料,为雄性生殖疾病的治疗策略提供新方向。 展开更多
关键词 N^(6)-甲基腺苷(m^(6)A)修饰 rna修饰 细胞自噬 雄性生殖疾病 男性不育
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N^(6)-methyladenosine(m^(6)A)RNA modification in tumor immunity
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作者 Siyi Zheng Hui Han Shuibin Lin 《Cancer Biology & Medicine》 SCIE CAS CSCD 2022年第4期385-397,共13页
Growing evidence supports that cancer progression is closely associated with the tumor microenvironment and immune evasion.Importantly,recent studies have revealed the crucial roles of epigenetic regulators in shaping... Growing evidence supports that cancer progression is closely associated with the tumor microenvironment and immune evasion.Importantly,recent studies have revealed the crucial roles of epigenetic regulators in shaping the tumor microenvironment and restoring immune recognition.N^(6)-methyladenosine(m^(6)A)modification,the most prevalent epigenetic modification of mammalian mRNAs,has essential functions in regulating the processing and metabolism of its targeted RNAs,and therefore affects various biological processes including tumorigenesis and progression.Recent studies have demonstrated the critical functions and molecular mechanisms underlying abnormal m^(6)A modification in the regulation of tumor immunity.In this review,we summarize recent research progress in the potential roles of m^(6)A modification in tumor immunoregulation,with a special focus on the anti-tumor processes of immune cells and involvement in immune-associated molecules and pathways.Furthermore,we review current knowledge regarding the close correlation between m6A-related risk signatures and the tumor immune microenvironment landscape,and we discuss the prognostic value and therapeutic efficacy of m^(6)A regulators in a variety of cancer types. 展开更多
关键词 N^(6)-methyladenosine(m^(6)A)modification immune evasion tumor microenvironment(TME) tumor immunology immune cells
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m^(6)A甲基化修饰在眼科疾病中的研究进展
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作者 薛愚愚 刘春梦 +1 位作者 陈婕 叶河江 《国际眼科杂志》 CAS 2024年第4期589-595,共7页
N6-甲基腺苷(m^(6)A)是真核细胞中最普遍、最丰富和最保守的RNA内部修饰方式。m^(6)A修饰主要通过m^(6)A甲基转移酶、m^(6)A去甲基化酶和m^(6)A甲基化识别蛋白调节RNA的剪接、稳定性、输出、降解和翻译等。近年来的研究发现,m^(6)A甲基... N6-甲基腺苷(m^(6)A)是真核细胞中最普遍、最丰富和最保守的RNA内部修饰方式。m^(6)A修饰主要通过m^(6)A甲基转移酶、m^(6)A去甲基化酶和m^(6)A甲基化识别蛋白调节RNA的剪接、稳定性、输出、降解和翻译等。近年来的研究发现,m^(6)A甲基化异常可能介导眼部的多种病理过程,参与代谢性、炎症性、退行性眼病和眼部肿瘤的发生发展,如糖尿病视网膜病变、白内障、年龄相关性黄斑变性、葡萄膜黑色素瘤等。本文就m^(6)A甲基化修饰在眼部组织细胞和眼科疾病中的作用进行综述,阐明m^(6)A甲基化在眼病中的潜在分子机制,可能为某些眼科疾病的患者提供新的治疗思路。 展开更多
关键词 N6-甲基腺苷(m^(6)A) rna甲基化 糖尿病视网膜病变 白内障 年龄相关性黄斑变性 葡萄膜黑色素瘤
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m^(6)A RNA甲基化修饰在颅脑损伤模型大鼠坏死性凋亡中的作用 被引量:2
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作者 林树楷 刘仲海 +2 位作者 刘珍 蔡金城 魏入廷 《中国组织工程研究》 CAS 北大核心 2023年第20期3167-3172,共6页
背景:哺乳动物中枢神经系统损伤依赖N6-甲基腺苷(m^(6)A)的调节,并与坏死性凋亡密切相关。目前在大鼠创伤性颅脑损伤中,m^(6)A RNA甲基化修饰与创伤性颅脑损伤坏死性凋亡的关系尚未被研究。目的:探讨m^(6)A RNA甲基化修饰与创伤性颅脑... 背景:哺乳动物中枢神经系统损伤依赖N6-甲基腺苷(m^(6)A)的调节,并与坏死性凋亡密切相关。目前在大鼠创伤性颅脑损伤中,m^(6)A RNA甲基化修饰与创伤性颅脑损伤坏死性凋亡的关系尚未被研究。目的:探讨m^(6)A RNA甲基化修饰与创伤性颅脑损伤大鼠坏死性凋亡的关系,为颅脑损伤坏死性凋亡的发生发展及预后的分子机制提供实验依据。方法:选取SPF级SD雄性大鼠30只,随机分为假手术组、创伤性颅脑损伤组和NSC118218(STAT1抑制剂)组,各10只。后2组通过改良Feeney法建立颅脑损伤模型,假手术组仅暴露脑硬膜,不进行颅脑打击。颅脑损伤6 h后检测各组大鼠大脑皮质炎症因子肿瘤坏死因子ɑ、白细胞介素6、白细胞介素1β、白细胞介素10和高迁移率族蛋白B1表达水平以及脑含水量,检测YTH结构域家族蛋白2、总m^(6)A RNA甲基化修饰水平、STAT1和JAK1的表达水平。结果与结论:①创伤性颅脑损伤组和NSC118218组炎症因子水平和脑含水量明显高于假手术组,m^(6)A RNA甲基化修饰比例和YTHDF2表达水平明显低于假手术组,JAK1和STAT1的表达水平明显高于假手术组(P<0.05);②与创伤性颅脑损伤组相比,NSC118218组炎症因子水平和脑含水量明显降低,m^(6)A RNA甲基化修饰比例和YTH结构域家族蛋白2表达水平明显升高,JAK1和STAT1的mRNA及蛋白表达水平明显降低(P<0.05);③提示颅脑损伤后m^(6)A RNA甲基化修饰比例降低,YTH结构域家族蛋白2表达水平下降,激活JAK/STAT信号通路,增加JAK1和STAT1的表达,促进细胞坏死性凋亡。 展开更多
关键词 创伤性颅脑损伤 m^(6)A rna甲基化 坏死性凋亡 JAK/STAT 动物模型
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养精种玉汤对卵巢储备功能减退模型大鼠RNA-m^(6)A修饰的影响 被引量:5
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作者 李宛静 邓蒂斯 +2 位作者 汪景仪 张俊新 许金榜 《中国中医药信息杂志》 CAS CSCD 2023年第5期109-113,共5页
目的观察养精种玉汤对卵巢储备功能减退(DOR)模型大鼠RNA-m^(6)A修饰的影响,探讨其改善卵巢储备功能的机制。方法选取60只动情周期正常的SD雌性大鼠,采用雷公藤甲素诱导DOR模型,将大鼠分为空白组、模型组、脱氢表雄酮(DHEA)组和养精种... 目的观察养精种玉汤对卵巢储备功能减退(DOR)模型大鼠RNA-m^(6)A修饰的影响,探讨其改善卵巢储备功能的机制。方法选取60只动情周期正常的SD雌性大鼠,采用雷公藤甲素诱导DOR模型,将大鼠分为空白组、模型组、脱氢表雄酮(DHEA)组和养精种玉汤低、中、高剂量组(中药低、中、高剂量组),每组10只,给药组分别灌胃相应药液,连续2周。HE染色观察卵巢组织形态,ELISA检测血清雌二醇(E2)、促卵泡激素(FSH)、黄体生成素(LH)、抗米勒管激素(AMH)含量,Western blot、qPCR测定卵巢组织METTL3、FTO、YTHDC2蛋白和基因表达。结果与空白组比较,模型组大鼠卵巢组织皮质区损伤,颗粒细胞脱落,各级卵泡数量明显减少,闭锁卵泡及黄体数量增加(P<0.05);血清E2、AMH含量减少,FSH、LH含量增加(P<0.05),卵巢组织METTL3、FTO、YTHDC2蛋白及mRNA表达降低(P<0.05)。与模型组比较,中药高剂量组大鼠卵巢组织损伤明显改善,各级卵泡数量增加,闭锁卵泡及黄体数量减少(P<0.05);血清E2含量增加,FSH、LH含量减少(P<0.05),卵巢组织METTL3、FTO、YTHDC2蛋白表达升高,FTO mRNA表达升高(P<0.05)。结论养精种玉汤能够通过调控卵巢RNA-m^(6)A修饰改善卵巢储备功能。 展开更多
关键词 养精种玉汤 rna-m^(6)A修饰 卵巢储备功能 大鼠
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m^(6)A相关基因在激素性股骨头坏死中的生物信息学分析
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作者 令狐熙涛 桂佳琦 +2 位作者 梁卓智 瓦庆德 黄帅 《中国组织工程研究》 CAS 北大核心 2024年第36期5811-5816,共6页
背景:m^(6)A修饰与股骨头坏死的发生发展相关,但在激素性股骨头坏死中的作用尚不清楚。目的:基于GEO数据库,采用生物信息学方法分析激素性股骨头坏死中表达差异的m^(6)A基因及互作miRNAs,探寻其潜在发病机制。方法:在GEO数据库中检索并... 背景:m^(6)A修饰与股骨头坏死的发生发展相关,但在激素性股骨头坏死中的作用尚不清楚。目的:基于GEO数据库,采用生物信息学方法分析激素性股骨头坏死中表达差异的m^(6)A基因及互作miRNAs,探寻其潜在发病机制。方法:在GEO数据库中检索并下载与激素性股骨头坏死相关的mRNA表达谱数据集(GSE123568),通过R软件对数据集进行差异基因筛选及GO功能、KEGG通路富集分析。识别差异基因中的m^(6)A差异表达基因(m^(6)A-DEGs)并对其进行GO功能与KEGG通路富集分析,比较m^(6)A-DEGs的表达量并分析它们之间的相关性。最后通过Cytoscape构建m^(6)A-DEGs的PPI互作网络及筛选核心基因。使用TargetScan,miRTarBase和miRBD数据库预测m^(6)A-DEGs相关的潜在miRNAs,同时使用ChIPBase及hTFtarget数据库预测7个核心基因潜在转录因子,然后分别构建m^(6)A-miRNA与转录因子m^(6)A调控网络。最后使用数据集GSE74089验证7个核心m^(6)A-DEGs的表达水平。结果与结论:①从数据集中共筛选出2460个差异表达的基因,其中1455个上调,1005个下调。②从数据集中筛选出了14个m^(6)A-DEGs,包括3个下调和11个上调基因,m^(6)A-DEGs在激素性股骨头坏死中的表达具有显著差异(P<0.05),Spearman分析表明它们之间具有一定相关性。③m^(6)A-DEGs的GO和KEGG富集分析主要集中在骨髓细胞分化与发育、免疫受体与细胞因子受体活性、破骨细胞分化、AMPK与白细胞介素17信号通路。④m^(6)A-DEGs前7个核心基因包括YTHDF3,YTHDF1,YTHDF2,ALKBH5,METTL3,HNRNPA2B1及HNRNPC,它们在miRTarBase,miRDB和TargetScan数据库中共有44个miRNA重叠,在ChIPBase及hTFtarget数据库中共有79个重叠转录因子。⑤在GSE74089数据集中有6个核心m^(6)A-DEGs的表达水平与GSE123568数据集一致。⑥结果证实,根据生物信息学方法筛选的7个m^(6)A-DEGs可能通过调控多个miRNA、转录因子和AMPK及白细胞介素17信号通路表达,进而影响激素性股骨头坏死中骨髓细胞分化发育与破骨细胞分化,为进一步深入研究激素性股骨头坏死的发病机制和靶向治疗提供了数据支持和研究方向。 展开更多
关键词 激素性股骨头坏死 m^(6)A甲基化 微小rna 转录因子 生物信息学 差异基因 基因调控网络 核心基因
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m^(6)A及m^(5)C甲基化修饰通过促进细胞增殖与转移影响癌症的发生和发展
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作者 邵爽 郭纪伟 孟玮 《国际医药卫生导报》 2024年第8期1316-1320,共5页
在RNA中已经发现了170多种化学修饰,RNA甲基化修饰是一个重要的转录后修饰过程,N6-甲基腺苷(m^(6)A)和5-甲基胞嘧啶(m^(5)C)普遍存在于真核生物和原核生物中,使得RNA甲基化在调控基因表达进而影响细胞生物活性的研究越来越受到重视。与... 在RNA中已经发现了170多种化学修饰,RNA甲基化修饰是一个重要的转录后修饰过程,N6-甲基腺苷(m^(6)A)和5-甲基胞嘧啶(m^(5)C)普遍存在于真核生物和原核生物中,使得RNA甲基化在调控基因表达进而影响细胞生物活性的研究越来越受到重视。与细胞增殖和转移有关的信号通路调控肿瘤免疫、代谢等细胞活动,并在调节器官大小、组织再生和干细胞自我更新中起着关键作用,影响癌症的发生和发展。在本综述中,我们讨论m^(6)A及m^(5)C甲基化修饰通过一些热门通路调控癌症的发生和发展,这为我们从RNA甲基化的角度理解疾病和寻找新的治疗方法提供了新的理论基础。 展开更多
关键词 rna甲基化修饰 信号通路 N6-甲基腺苷 5-甲基胞嘧啶 癌症发生和发展 进展
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Long non-coding RNA GATA6-AS1 is mediated by N6-methyladenosine methylation and inhibits the proliferation and metastasis of gastric cancer
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作者 Jun-Jie Shen Min-Chang Li +1 位作者 Shao-Qi Tian Wen-Ming Chen 《World Journal of Gastrointestinal Oncology》 SCIE 2024年第3期1019-1028,共10页
BACKGROUND Through experimental research on the biological function of GATA6-AS1,it was confirmed that GATA6-AS1 can inhibit the proliferation,invasion,and migration of gastric cancer cells,suggesting that GATA6-AS1 p... BACKGROUND Through experimental research on the biological function of GATA6-AS1,it was confirmed that GATA6-AS1 can inhibit the proliferation,invasion,and migration of gastric cancer cells,suggesting that GATA6-AS1 plays a role as an anti-oncogene in the occurrence and development of gastric cancer.Further experi-ments confirmed that the overexpression of fat mass and obesity-associated protein(FTO)inhibited the expression of GATA6-AS1,thereby promoting the occurrence and development of gastric cancer.AIM To investigate the effects of GATA6-AS1 on the proliferation,invasion and migration of gastric cancer cells and its mechanism of action.METHODS We used bioinformatics methods to analyze the Cancer Genome Atlas(https://portal.gdc.cancer.gov/.The Cancer Genome Atlas)and download expression data for GATA6-AS1 in gastric cancer tissue and normal tissue.We also constructed a GATA6-AS1 lentivirus overexpression vector which was transfected into gastric cancer cells to investigate its effects on proliferation,migration and invasion,and thereby clarify the expression of GATA6-AS1 in gastric cancer and its biological role in the genesis and development of gastric cancer.Next,we used a database(http://starbase.sysu.edu.cn/starbase2/)to analysis GATA6-AS1 whether by m6A methylation modify regulation and predict the methyltransferases that may methylate GATA6-AS1.Furthermore,RNA immunoprecipitation experiments confirmed that GATA6-AS1 was able to bind to the m6A methylation modification enzyme.These data allowed us to clarify the ability of m6A methylase to influence the action of GATA6-AS1 and its role in the occurrence and development of gastric cancer.RESULTS Low expression levels of GATA6-AS1 were detected in gastric cancer.We also determined the effects of GATA6-AS1 overexpression on the biological function of gastric cancer cells.GATA6-AS1 had strong binding ability with the m6A demethylase FTO,which was expressed at high levels in gastric cancer and negatively correlated with the expression of GATA6-AS1.Following transfection with siRNA to knock down the expression of FTO,the expression levels of GATA6-AS1 were up-regulated.Finally,the proliferation,migration and invasion of gastric cancer cells were all inhibited following the knockdown of FTO expression.CONCLUSION During the occurrence and development of gastric cancer,the overexpression of FTO may inhibit the expression of GATA6-AS1,thus promoting the proliferation and metastasis of gastric cancer. 展开更多
关键词 Long non-coding rna GATA6-AS1 N6-methyladenine modification Fat mass and obesity-associated protein Gastric cancer
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Lipid metabolism and m^(6)A RNA methylation are altered in lambs supplemented rumen-protected methionine and lysine in a low-protein diet
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作者 Kefyalew Gebeyew Chao Yang +7 位作者 Hui Mi Yan Cheng Tianxi Zhang Fan Hu Qiongxian Yan Zhixiong He Shaoxun Tang Zhiliang Tan 《Journal of Animal Science and Biotechnology》 SCIE CAS CSCD 2023年第1期244-260,共17页
Background:Methionine or lysine has been reported to influence DNA methylation and fat metabolism,but their combined effects in N6-methyl-adenosine(m^(6)A)RNA methylation remain unclarified.The combined effects of rum... Background:Methionine or lysine has been reported to influence DNA methylation and fat metabolism,but their combined effects in N6-methyl-adenosine(m^(6)A)RNA methylation remain unclarified.The combined effects of rumen-protected methionine and lysine(RML)in a low-protein(LP)diet on lipid metabolism,m^(6)A RNA methylation,and fatty acid(FA)profiles in the liver and muscle of lambs were investigated.Sixty-three male lambs were divided into three treatment groups,three pens per group and seven lambs per pen.The lambs were fed a 14.5%crude protein(CP)diet(adequate protein[NP]),12.5%CP diet(LP),and a LP diet plus RML(LP+RML)for 60 d.Results:The results showed that the addition of RML in a LP diet tended to lower the concentrations of plasma leptin(P=0.07),triglyceride(P=0.05),and non-esterified FA(P=0.08).Feeding a LP diet increased the enzyme activity or m RNA expression of lipogenic enzymes and decreased lipolytic enzymes compared with the NP diet.This effect was reversed by supplementation of RML with a LP diet.The inclusion of RML in a LP diet affected the polyunsaturated fatty acids(PUFA),n-3 PUFA,and n-6 PUFA in the liver but not in the muscle,which might be linked with altered expression of FA desaturase-1(FADS1)and acetyl-Co A carboxylase(ACC).A LP diet supplemented with RML increased(P<0.05)total m^(6)A levels in the liver and muscle and were accompanied by decreased expression of fat mass and obesity-associated protein(FTO)and alk B homologue 5(ALKBH5).The m RNA expressions of methyltransferase-like 3(METTL3)and methyltransferase-like 14(METTL14)in the LP+RML diet group were lower than those in the other two groups.Supplementation of RML with a LP diet affected only liver YTH domain family(YTHDF2)proteins(P<0.05)and muscle YTHDF3(P=0.09),which can be explained by limited m^(6)Abinding proteins that were mediated in m RNA fate.Conclusions:Our findings showed that the inclusion of RML in a LP diet could alter fat deposition through modulations of lipogenesis and lipolysis in the liver and muscle.These changes in fat metabolism may be associated with the modification of m^(6)A RNA methylation. 展开更多
关键词 LAMBS Lipid metabolism Low-protein LYSINE METHIONINE m^(6)A rna methylation
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m^(6)A RNA甲基化调节因子与前列腺癌预后的关系
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作者 刘虹汝 宁静华 +3 位作者 张鑫 赵严红 屈润 张钰哲 《中国医科大学学报》 CAS 北大核心 2023年第12期1098-1105,共8页
目的探索N6-甲基腺嘌呤(m^(6)A)RNA甲基化调节因子(以下简称m^(6)A调节因子)与前列腺癌预后的关系。方法从癌症基因组图谱(TCGA)数据库下载416例前列腺癌样本和80例癌旁样本的临床病理数据及其mRNA相关数据,获取METTL3、METTL14、WTAP、... 目的探索N6-甲基腺嘌呤(m^(6)A)RNA甲基化调节因子(以下简称m^(6)A调节因子)与前列腺癌预后的关系。方法从癌症基因组图谱(TCGA)数据库下载416例前列腺癌样本和80例癌旁样本的临床病理数据及其mRNA相关数据,获取METTL3、METTL14、WTAP、RBM15、ZC3H13、YTHDC1、YTHDC2、YTHDF1、YTHDF2、HNRNPC、FTO和ALKBH5共12种m^(6)A调节因子。筛选出前列腺癌样本差异表达的m^(6)A调节因子。对前列腺癌组织样本进行无监督聚类分组,并比较其总体生存率的差异。进行多因素Cox回归分析,根据风险评分分为高风险组和低风险组,比较2组生存率。对临床病理因素进行风险评分,构建多因素Cox回归模型,评估预后预测价值。采用免疫组织化学染色方法检测前列腺癌组织中METTL14和FTO的表达。结果从12个m^(6)A调节因子中筛选出8个差异表达的调节因子。通过无监督聚类分析将前列腺癌样本分成3组,分别为Cluster 1、Cluster 2和Cluster 3,3组的生存时间存在显著差异。多因素Cox回归分析发现,METTL14和FTO与前列腺癌患者的预后密切相关。构建Cox回归模型,对前列腺癌患者进行风险评分,发现高、低风险组总生存率有统计学差异,且风险评分可作为独立预后指标。前列腺癌组织中METTL14和FTO蛋白阳性表达率明显高于癌旁组织(P<0.05)。结论本研究构建了基于m^(6)A调节因子的前列腺癌预后预测模型,其中风险评分可作为独立的预后指标,METTL14和FTO可作为诊断前列腺癌的分子标志物和治疗的潜在靶点。 展开更多
关键词 m^(6)A rna甲基化调节因子 前列腺癌 预后
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RNA modification by M6A methylation in cardiovascular diseases: Current trends and future directions
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作者 Jinglin Wang Lingfeng Zha 《Frigid Zone Medicine》 2022年第3期158-177,共20页
N6-methyladenosine(M6A)is the most common modification in eukaryotic RNAs for the regulation of RNA transcription,processing,splicing,degradation,and translation.RNA modification by M6A is dynamically reversible,invol... N6-methyladenosine(M6A)is the most common modification in eukaryotic RNAs for the regulation of RNA transcription,processing,splicing,degradation,and translation.RNA modification by M6A is dynamically reversible,involving methylated transferase,demethylase,and methylated reading protein.M6A-mediated gene regulation involves cell differentiation,metastasis,apoptosis,and proliferation.Dysregulation of M6A can lead to various diseases.Cardiovascular disease(CVD)seriously endangers human health and brings great social burden.Seeking effective prevention and treatment strategies for CVD is a challenge to both fundamentalists and clinicians.Substantial evidence has suggested the key role of M6A modification in the development of CVDs.This review summarizes the mechanism of M6A RNA modification and the latest research progress in respect with its role in CVDs,including atherosclerosis,coronary artery disease,myocardial infarction and cardiac remodeling,myocardial ischemia-reperfusion injury,heart failure,hypertension,and aortic aneurysm,and the potential applications of the findings to CVDs,thereby providing new ideas and approaches for the diagnosis and therapy of CVDs. 展开更多
关键词 rna modification M6A methylation cardiovascular disease EPIGENETICS
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Internal m^(6)A and m^(7)G RNA modifications in hematopoietic system and acute myeloid leukemia
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作者 Xiaoxu Zhang Yanni Ma +2 位作者 Jia Yu Rui Su Xiaoshuang Wang 《Chinese Medical Journal》 SCIE CAS CSCD 2024年第9期1033-1043,共11页
Epitranscriptomics focuses on the RNA-modification-mediated post-transcriptional regulation of gene expression.The past decade has witnessed tremendous progress in our understanding of the landscapes and biological fu... Epitranscriptomics focuses on the RNA-modification-mediated post-transcriptional regulation of gene expression.The past decade has witnessed tremendous progress in our understanding of the landscapes and biological functions of RNA modifications,as prompted by the emergence of potent analytical approaches.The hematopoietic system provides a lifelong supply of blood cells,and gene expression is tightly controlled during the differentiation of hematopoietic stem cells(HSCs).The dysregulation of gene expression during hematopoiesis may lead to severe disorders,including acute myeloid leukemia(AML).Emerging evidence supports the involvement of the mRNA modification system in normal hematopoiesis and AML pathogenesis,which has led to the development of small-molecule inhibitors that target N6-methyladenosine(m^(6)A)modification machinery as treatments.Here,we summarize the latest findings and our most up-to-date information on the roles of m^(6)A and N7-methylguanine in both physiological and pathological conditions in the hematopoietic system.Furthermore,we will discuss the therapeutic potential and limitations of cancer treatments targeting m^(6)A. 展开更多
关键词 N6-methyladenosine N7-methylguanine HEMATOPOIESIS Acute myeloid leukemia Therapeutic target rna modifications
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