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A systematic scoping review of study methodology for randomized controlled trials investigating probiotics in athletic and physically active populations
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作者 Alex E.Mohr David B.Pyne +2 位作者 Geovana Silva Fogaça Leite Deborah Akins Jamie Pugh 《Journal of Sport and Health Science》 SCIE CSCD 2024年第1期61-71,共11页
Background:The purported ergogenic and health effects of probiotics have been a topic of great intrigue among researchers,practitioners,and the lay public alike.There has also been an increased research focus within t... Background:The purported ergogenic and health effects of probiotics have been a topic of great intrigue among researchers,practitioners,and the lay public alike.There has also been an increased research focus within the realm of sports science and exercise medicine on the athletic gut microbiota.However,compared to other ergogenic aids and dietary supplements,probiotics present unique study challenges.The objectives of this systematic scoping review were to identify and characterize study methodologies of randomized controlled trials investigating supplementation with probiotics in athletes and physically active individuals.Methods:Four databases(MEDLINE,CINAHL,Cochrane CENTRAL,and Cochrane Database of Systematic Reviews)were searched for randomized controlled studies involving healthy athletes or physically active individuals.An intervention with probiotics and inclusion of a control and/or placebo group were essential.Only peer-reviewed articles in English were considered,and there were no date restrictions.Results were extracted and presented in tabular form to detail study protocols,characteristics,and outcomes.Bias in randomized controlled trials was determined with the RoB 2.0 tool.Results:A total of 45 studies were included in the review,with 35 using a parallel group design and 10 using a cross-over design.Approximately half the studies used a single probiotic and the other half a multi-strain preparation.The probiotic dose ranged from 2×10^(8)to 1×10^(11)colony forming units daily,and the length of intervention was between 7 and 150 days.Fewer than half the studies directly assessed gastrointestinal symptoms,gut permeability,or the gut microbiota.The sex ratio of participants was heavily weighted toward males,and only 3 studies exclusively investigated females.Low-level adverse events were reported in only 2 studies,although the methodology of reporting varied widely.The risk of bias was generally low,although details on randomization were lacking in some studies.Conclusion:There is a substantial body of research on the effects of prob iotic supplementation in healthy athletes and physically active individuals.Considerable heterogeneity in probiotic selection and dosage as well as outcome measures has made clinical and mechanistic interpretation challenging for both health care practitioners and researchers.Attention to issues of randomization of participants,treatments and interventions,selection of outcomes,demographics,and reporting of adverse events will facilitate more trustworthy interpretation of probiotic study results and inform evidence-based guidelines. 展开更多
关键词 EXERCISE Experimental methodology Gastrointestinal symptoms Gut microbiota Probiotic supplementation
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Enhancing wood efficiency through comprehensive wood flow analysis:Methodology and strategic insights
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作者 Ruisheng Wang Peer Haller 《Forest Ecosystems》 SCIE CSCD 2024年第2期172-183,共12页
Wood,an essential natural resource in human civilization,remains widely used despite advances in technology and material substitution.The surge in greenhouse gas emissions and environmental concerns accentuates the ne... Wood,an essential natural resource in human civilization,remains widely used despite advances in technology and material substitution.The surge in greenhouse gas emissions and environmental concerns accentuates the need for optimizing wood utilization.Material flow analysis is a powerful tool for tracking material flows and stocks,aiding resource management and environmental decision-making.However,the full extent of its methodological dimensions,particularly within the context of the wood supply chain,remains relatively unexplored.In this study,we delve into the existing literature on wood flow analysis,discussing its primary objectives,materials involved,temporal and spatial scales,data sources,units,and conversion factors.Additionally,data uncertainty,data reconciliation and crucial assumptions in material flow analysis are highlighted in this paper.Key findings reveal the significance of wood cascading and substitution effects by replacing non-wood materials,where they can reduce greenhouse gas emissions more than the natural carbon sink of forests and wood products.The immediate impact of short-term wood cascading might not be as robust as the substitution effect,with energy substitution showcasing better results than material substitution.However,it's crucial to note that these conclusions could experience significant reversal from a long-term and global perspective.Strategies for improving wood efficiency involve maximizing material use,advancing construction technologies,extending product lifespans,promoting cascade use,and optimizing energy recovery processes.The study underscores the need for standardized approaches in wood flow analysis and emphasizes the potential of wood efficiency strategies in addressing environmental challenges. 展开更多
关键词 Material flow analysis WOOD methodology Cascade use Substitution effects
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Optimization and Characterization of Cellulose Extraction from Grevillea robusta (Silky Oak) Leaves by Soda-Anthraquinone Pulping Using Response Surface Methodology
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作者 Catherine N. Muya John M. Onyari +2 位作者 Lydia W. Njenga Joab O. Onyango Wilson M. Gitari 《Green and Sustainable Chemistry》 2024年第3期43-65,共23页
Response surface methodology (RSM) using the central composite design (CCD) was applied to examine the impact of soda-anthraquinone pulping conditions on Grevillea robusta fall leaves. The pulping factors studied were... Response surface methodology (RSM) using the central composite design (CCD) was applied to examine the impact of soda-anthraquinone pulping conditions on Grevillea robusta fall leaves. The pulping factors studied were: NaOH charge 5% to 20% w/v, pulping time 30 to 180 minutes, and the anthraquinone charge 0.1 to 0.5% w/w based on the oven-dried leaves. The responses evaluated were the pulp yield, cellulose content, and the degree of delignification. Various regression models were used to evaluate the effects of varying the pulping conditions. The optimum conditions attained were;NaOH charge of 14.63%, 0.1% anthraquinone, and a pulping period of 154 minutes, corresponding to 20.68% pulp yield, 80.56% cellulose content, and 70.34% lignin removal. Analysis of variance (ANOVA), was used to determine the most important variables that improve the extraction process of cellulose. The experiment outcomes matched those predicted by the model (Predicted R2 = 0.9980, Adjusted R2 = 0.9994), demonstrating the adequacy of the model used. FTIR analysis confirmed the elimination of the non-cellulosic fiber constituents. The lignin and hemicellulose-related bands (around 1514 cm−1, 1604 cm−1, 1239 cm−1, and 1734 cm−1) decreased with chemical treatment, indicating effective cellulose extraction by the soda-anthraquinone method. Similar results were obtained by XRD, SEM and thermogravimetric analysis of the extracted cellulose. Therefore, Grevillea robusta fall leaves are suitable renewable, cost-effective, and environmentally friendly non-wood biomass for cellulose extraction. 展开更多
关键词 Cellulose Extraction Response Surface methodology Central Composite Design DELIGNIFICATION
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Research on the development methodology for clinical practice guidelines for organic integration of traditional Chinese medicine and Western medicine
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作者 Ying-Hui Jin Yan-Ping Wang +22 位作者 Ying-Lan Xie Gui-Hua Tian Xiao-Yu Zhang Nan-Nan Shi Ke-Hu Yang Xin Sun Yao-Long Chen Da-Rong Wu Xin-Feng Guo Long Ge Chen Zhao Cheng Lu Yin Jiang Jing Guo Si-Yu Yan Yong-Bo Wang Qiao Huang Xiang-Ying Ren Ying-Yue Rao Yun-Yun Wang Meng-Qian Yuan Xian-Tao Zeng Hong-Cai Shang 《Military Medical Research》 SCIE CAS CSCD 2024年第3期313-322,共10页
Integrated traditional Chinese medicine(TCM)and Western medicine(WM)is a new medical science grounded in the knowledge bases of both TCM and WM,which then forms a unique modern medical system in China.Integrated TCM a... Integrated traditional Chinese medicine(TCM)and Western medicine(WM)is a new medical science grounded in the knowledge bases of both TCM and WM,which then forms a unique modern medical system in China.Integrated TCM and WM has a long history in China,and has made important achievements in the process of clinical diagnosis and treatment.However,the methodological defects in currently published clinical practice guidelines(CPGs)limit its development.The organic integration of TCM and WM is a deeper integration of TCM and WM.To realize the progression of"integration"to"organic integration",a targeted and standardized guideline development methodology is needed.Therefore,the purpose of this study is to establish a standardized development procedure for clinical practice guidelines for the organic integration of TCM and WM to promote the systematic integration of TCM and WM research results into clinical practice guidelines in order to achieve optimal results as the whole is greater than the sum of the parts. 展开更多
关键词 methodology Traditional Chinese medicine Western medicine Organic integration Clinical practice guidelines(CPGs)
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The Influence of Tartaric Acid in the Silver Nanoparticle Synthesis Using Response Surface Methodology
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作者 Yatim Lailun Ni’mah Afaf Baktir +1 位作者 Dewi Santosaningsih Suprapto Suprapto 《Journal of Renewable Materials》 EI CAS 2024年第2期245-258,共14页
Silver nanoparticles(AgNPs)synthesized using tartaric acid as a capping agent have a great impact on the reaction kinetics and contribute significantly to the stability of AgNPs.The protective layer formed by tartaric... Silver nanoparticles(AgNPs)synthesized using tartaric acid as a capping agent have a great impact on the reaction kinetics and contribute significantly to the stability of AgNPs.The protective layer formed by tartaric acid is an important factor that protects the silver surface and reduces potential cytotoxicity problems.These attributes are critical for assessing the compatibility of AgNPs with biological systems and making them suitable for drug delivery applications.The aim of this research is to conduct a comprehensive study of the effect of tartaric acid concentration,sonication time and temperature on the formation of silver nanoparticles.Using Response Surface Methodology(RSM)with Face-Centered Central Composite Design(FCCD),the optimization process identifies the most favorable synthesis conditions.UV-Vis spectrum regression analysis shows that AgNPs stabilized with tartaric acid are more stable than AgNPs without tartaric acid.This highlights the increased stability that tartaric acid provides in AgNP ssssynthesis.Particle size distribution analysis showed a multimodal distribution for AgNPs with tartaric acid and showed the smallest size peak with an average size of 20.53 nm.The second peak with increasing intensity shows a dominant average size of 108.8 nm accompanied by one standard deviation of 4.225 nm and a zeta potential of−11.08 mV.In contrast,AgNPs synthesized with polyvinylpyrrolidone(PVP)showed a unimodal particle distribution with an average particle size of 81.62 nm and a zeta potential of−2.96 mV.The more negative zeta potential of AgNP-tartaric acid indicates its increased stability.Evaluation of antibacterial activity showed that AgNPs stabilized with tartaric acid showed better performance against E.coli and B.subtilis bacteria compared with AgNPs-PVP.In summary,this study highlights the potential of tartaric acid in AgNP synthesis and suggests an avenue for the development of stable AgNPs with versatile applications. 展开更多
关键词 Tartaric acid silver nanoparticle polyvinyl pyrrolidone response surface methodology
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How to use the Surveillance,Epidemiology,and End Results(SEER)data:research design and methodology
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作者 Wen-Qiang Che Yuan-Jie Li +5 位作者 Chi-Kwan Tsang Yu-Jiao Wang Zheng Chen Xiang-Yu Wang An-Ding Xu Jun Lyu 《Military Medical Research》 SCIE CAS CSCD 2024年第5期686-696,共11页
In the United States(US),the Surveillance,Epidemiology,and End Results(SEER)program is the only comprehensive source of population-based information that includes stage of cancer at the time of diagnosis and patient s... In the United States(US),the Surveillance,Epidemiology,and End Results(SEER)program is the only comprehensive source of population-based information that includes stage of cancer at the time of diagnosis and patient survival data.This program aims to provide a database about cancer incidence and survival for studies of surveillance and the development of analytical and methodological tools in the cancer field.Currently,the SEER program covers approximately half of the total cancer patients in the US.A growing number of clinical studies have applied the SEER database in various aspects.However,the intrinsic features of the SEER database,such as the huge data volume and complexity of data types,have hindered its application.In this review,we provided a systematic overview of the commonly used methodologies and study designs for retrospective epidemiological research in order to illustrate the application of the SEER database.Therefore,the goal of this review is to assist researchers in the selection of appropriate methods and study designs for enhancing the robustness and reliability of clinical studies by mining the SEER database. 展开更多
关键词 Surveillance Epidemiology and End results(SEER) Big data EPIDEMIOLOGY methodologIES Study design
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Optimization of Preparation of Oregano Oil Microspheres by Box-Behnken Response Surface Methodology
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作者 Fei HAN Mengyao TU +5 位作者 Hui YANG Hekun DUAN Fuhao HU Xinli LIANG Yang GUAN Wei XU 《Medicinal Plant》 2024年第4期40-45,共6页
[Objectives]To optimize the formulation and preparation of oregano oil microspheres by Box-Behnken response surface methodology.[Methods]Chitosan was used as the carrier material to prepare oregano oil microspheres by... [Objectives]To optimize the formulation and preparation of oregano oil microspheres by Box-Behnken response surface methodology.[Methods]Chitosan was used as the carrier material to prepare oregano oil microspheres by emulsion crosslinking method.The encapsulation efficiency,drug loading and ID 50 were used as the evaluation indicators,and the comprehensive score(OD)obtained by"coefficient of variation-AHP comprehensive weighting method"was used as the final evaluation indicator.The formulation design and preparation process were optimized by single factor experiment and Box-Behnken response surface methodology,and the optimal process parameters were determined.[Results]The optimal formulation and preparation process parameters of oregano oil microspheres were as follows:the ratio of oregano oil to chitosan was 2∶1,the emulsifying speed of double emulsion was 200 r/min,the amount of emulsifier in the colostrum was 4%,and the volume of curing agent was 1.0 mL.The average encapsulation efficiency was 45.33%±1.32%,the average drug loading was 30.59%±2.45%,and the median diameter(ID 50)was 52.596μm±0.023%.[Conclusions]The encapsulation efficiency,drug loading and ID 50 of oregano oil chitosan microspheres prepared by emulsion crosslinking method met the requirements.The drug-loaded microsphere not only can be used as a preparation finished product for direct application,but also be used as a product intermediate to lay a foundation for the research and development of subsequent dosage forms. 展开更多
关键词 Oregano oil CHITOSAN MICROSPHERES PREPARATION Response surface methodology(RSM)
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Optimization of Methylene Blue Dye Adsorption onto Coconut Husk Cellulose Using Response Surface Methodology: Adsorption Kinetics, Isotherms and Reusability Studies
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作者 Frank Ouru Omwoyo Geoffrey Otieno 《Journal of Materials Science and Chemical Engineering》 2024年第2期1-18,共18页
In this study, coconut husk cellulose was employed as a cost-effective and environmentally friendly adsorbent to eliminate methylene blue (MB) dye from aqueous solutions. The successful development of response surface... In this study, coconut husk cellulose was employed as a cost-effective and environmentally friendly adsorbent to eliminate methylene blue (MB) dye from aqueous solutions. The successful development of response surface methodology paired with a central composite design (RSM-CCD) enabled the optimization and modelling of the adsorption process. The study investigated the individual and combined effects of three variables (pH, contact time, and initial MB dye concentration) on the adsorption of MB dye onto coconut husk cellulose. The developed RSM-CCD model exhibited a remarkable degree of precision in predicting the removal efficiency of MB dye within the specified experimental parameters. This was demonstrated by the strong regression parameters, with an R<sup>2</sup> value of 99.79% and an adjusted R<sup>2</sup> value of 99.6%. The study depicted that the optimal parameters for attaining a 98.8827% removal of MB dye using coconut husk cellulose were as follows: an initial MB dye concentration of 30 mg∙L<sup>−1</sup>, contact time of 120 minutes, and pH 7 at a fixed adsorbent dose of 0.5 g. The Freundlich isotherm model provided the most satisfactory description of the equilibrium adsorption isotherms, suggesting that MB dye adsorption onto coconut husk cellulose occurs on a heterogeneous surface. The experimental results demonstrated a strong agreement with the pseudo-second-order kinetics model, indicating that the number of active sites present on the cellulose adsorbent predominantly influences the adsorption process of MB dye. Additionally, the adsorbent made from coconut husk cellulose exhibited the potential to be reused, as it retained its efficiency for a maximum of three cycles of adsorption of MB dye. The results of this study show that coconut husk cellulose has the potential to be an effective and sustainable adsorbent for removing MB dye from aqueous solutions. 展开更多
关键词 Adsorption Kinetics Isotherms OPTIMIZATION Response Surface methodology CELLULOSE
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Optimizing Bucket Elevator Performance through a Blend of Discrete Element Method, Response Surface Methodology, and Firefly Algorithm Approaches
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作者 Pirapat Arunyanart Nithitorn Kongkaew Supattarachai Sudsawat 《Computers, Materials & Continua》 SCIE EI 2024年第8期3379-3403,共25页
This research introduces a novel approach to enhancing bucket elevator design and operation through the integration of discrete element method(DEM)simulation,design of experiments(DOE),and metaheuristic optimization a... This research introduces a novel approach to enhancing bucket elevator design and operation through the integration of discrete element method(DEM)simulation,design of experiments(DOE),and metaheuristic optimization algorithms.Specifically,the study employs the firefly algorithm(FA),a metaheuristic optimization technique,to optimize bucket elevator parameters for maximizing transport mass and mass flow rate discharge of granular materials under specified working conditions.The experimental methodology involves several key steps:screening experiments to identify significant factors affecting bucket elevator operation,central composite design(CCD)experiments to further explore these factors,and response surface methodology(RSM)to create predictive models for transport mass and mass flow rate discharge.The FA algorithm is then applied to optimize these models,and the results are validated through simulation and empirical experiments.The study validates the optimized parameters through simulation and empirical experiments,comparing results with DEM simulation.The outcomes demonstrate the effectiveness of the FA algorithm in identifying optimal bucket parameters,showcasing less than 10%and 15%deviation for transport mass and mass flow rate discharge,respectively,between predicted and actual values.Overall,this research provides insights into the critical factors influencing bucket elevator operation and offers a systematic methodology for optimizing bucket parameters,contributing to more efficient material handling in various industrial applications. 展开更多
关键词 Discrete element method(DEM) design of experiments(DOE) firefly algorithm(FA) response surface methodology(RSM)
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Optimization of Cellulose Nanocrystal Isolation from Ayous Sawdust Using Response Surface Methodology
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作者 Tchigo Alifa Hamida Aminatou +1 位作者 Oumar Said Jean-Bosco Tchatchueng 《Journal of Materials Science and Chemical Engineering》 2024年第1期36-55,共20页
This study focuses on the extraction of cellulose nanocrystals (CNC), from microcrystalline cellulose (MCC), derived from Ayous sawdust. The process involves multiple steps and a large amount of chemical products. The... This study focuses on the extraction of cellulose nanocrystals (CNC), from microcrystalline cellulose (MCC), derived from Ayous sawdust. The process involves multiple steps and a large amount of chemical products. The objective of this research was to determine the effects of factors that impact the isolation process and to identify the optimal conditions for CNC isolation by using the response surface methodology. The factors that varied during the process were the quantity of MCC, the concentration of sulfuric acid, the hydrolysis time and temperature, and the ultrasonic treatment time. The response measured was the yield. The study found that with 5.80 g of microcrystalline cellulose, a sulfuric acid concentration of 63.50% (w/w), a hydrolysis time of 53 minutes, a hydrolysis temperature of 69˚C, and a sonication time of 19 minutes are the ideal conditions for isolation. The experimental yield achieved was (37.84 ± 0.99) %. The main factors influencing the process were the sulfuric acid concentration, hydrolysis time and temperature, with a significant influence (p < 0.05). Infrared characterization results showed that nanocrystals were indeed isolated. With a crystallinity of 35.23 and 79.74, respectively, for Ayous wood fiber and nanocrystalline cellulose were observed by X-ray diffraction, with the formation of type II cellulose, thermodynamically more stable than native cellulose type I. 展开更多
关键词 Ayous Sawdust Lignocellulosic Waste ISOLATION Cellulose Nanocrystals OPTIMIZATION Response Surface methodology
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Ingredients-based Methodology and Fuzzy Logic Combined Short-Duration Heavy Rainfall Short-Range Forecasting:An Improved Scheme
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作者 TIAN Fu-you XIA Kun +2 位作者 SUN Jian-hua ZHENG Yong-guang HUA Shan 《Journal of Tropical Meteorology》 SCIE 2024年第3期241-256,共16页
Short-duration heavy rainfall(SHR),as delineated by the National Meteorological Center of the China Me-teorological Administration,is characterized by hourly rainfall amounts no less than 20.0 mm.SHR is one of the mos... Short-duration heavy rainfall(SHR),as delineated by the National Meteorological Center of the China Me-teorological Administration,is characterized by hourly rainfall amounts no less than 20.0 mm.SHR is one of the most common convective weather phenomena that can cause severe damage.Short-range forecasting of SHR is an important part of operational severe weather prediction.In the present study,an improved objective SHR forecasting scheme was developed by adopting the ingredients-based methodology and using the fuzzy logic approach.The 1.0°×1.0°National Centers for Environmental Prediction(NCEP)final analysis data and the ordinary rainfall(0.1-19.9 mm h-1)and SHR observational data from 411 stations were used in the improved scheme.The best lifted index,the total precipitable water,the 925 hPa specific humidity(Q 925),and the 925 hPa divergence(DIV 925)were selected as predictors based on objective analysis.Continuously distributed membership functions of predictors were obtained based on relative frequency analysis.The weights of predictors were also objectively determined.Experiments with a typhoon SHR case and a spring SHR case show that the main possible areas could be captured by the improved scheme.Verification of SHR forecasts within 96 hours with NCEP global forecasts 1.0°×1.0°data initiated at 08:00 Beijing Time during the warm seasons in 2015 show the results were improved from both deterministic and probabilistic perspectives.This study provides an objectively feasible choice for short-range guidance forecasts of SHR.The scheme can be applied to other convective phenomena. 展开更多
关键词 ingredients-based methodology fuzzy logic approach probability of short-duration heavy rainfall(SHR) improved forecasting scheme objectively obtained membership functions
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Simulated patient methodology as a“gold standard”in community pharmacy practice:Response to criticism
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作者 Christian Kunow Bernhard Langer 《World Journal of Methodology》 2024年第2期172-174,共3页
The simulated patient methodology(SPM)is considered the“gold standard”as covert participatory observation.SPM is attracting increasing interest for the investigation of community pharmacy practice;however,there is c... The simulated patient methodology(SPM)is considered the“gold standard”as covert participatory observation.SPM is attracting increasing interest for the investigation of community pharmacy practice;however,there is criticism that SPM can only show a small picture of everyday pharmacy practice and therefore has limited external validity.On the one hand,a certain design and application of the SPM goes hand in hand with an increase in external validity.Even if,on the other hand,this occurs at the expense of internal validity due to the trade-off situation,the justified criticism of the SPM for investigating community pharmacy practice can be countered. 展开更多
关键词 Simulated patient methodology Community pharmacy Gold standard Covert participatory observation Internal validity External validity
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Innovations and Challenges in Economic Census Methodology:A Study by the Bureau of Statistics
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作者 Suqing Li 《Proceedings of Business and Economic Studies》 2024年第5期145-150,共6页
The Bureau of Statistics has demonstrated a forward-looking strategic approach in its economic census.By leveraging dual innovations in technology and management,and incorporating modern technologies such as big data,... The Bureau of Statistics has demonstrated a forward-looking strategic approach in its economic census.By leveraging dual innovations in technology and management,and incorporating modern technologies such as big data,cloud computing,and the Internet of Things,it has deepened the reform of the census methodology.Additionally,the Bureau has built a multi-dimensional collaborative network that enhances international cooperation,departmental coordination,and public participation.This approach not only addresses the limitations of traditional statistical methods in a complex economic environment but also improves data quality and census efficiency,providing an accurate and reliable foundation for national economic decision-making. 展开更多
关键词 Economic census methodology Bureau of Statistics
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蓝舌病新疆分离株VP7蛋白编码基因序列分析及一步法RT-PCR方法的建立
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作者 马晓菁 谷文喜 +5 位作者 叶锋 刘帅 刘丽娅 谢彩云 钟旗 易新萍 《新疆农业科学》 CAS CSCD 北大核心 2024年第1期253-259,共7页
【目的】分析蓝舌病新疆分离株编码VP7蛋白S7基因保守序列,建立蓝舌病新疆分离株一步法RT-PCR方法,为新疆BTV分子流行病学调查及防控提供技术支持。【方法】采用二代测序技术获得新疆分离株S7基因序列,登陆GenBank对序列进行同源性Blas... 【目的】分析蓝舌病新疆分离株编码VP7蛋白S7基因保守序列,建立蓝舌病新疆分离株一步法RT-PCR方法,为新疆BTV分子流行病学调查及防控提供技术支持。【方法】采用二代测序技术获得新疆分离株S7基因序列,登陆GenBank对序列进行同源性Blast比对,用软件MEGA 5.0分析序列差异,根据蓝舌病新疆分离株编码VP7蛋白S7基因保守序列,运用软件Oligo6.0设计引物,对蓝舌病新疆分离株S7基因进行RT-PCR扩增,并验证该方法的特异性及敏感性。【结果】蓝舌病中国新疆分离株编码VP7蛋白S7基因序列与哈尔滨报道BTV分离株S7基因片段相似度较高为89.64%,与中国云南报道BTV-29型分离株、蒙古国BTV分离株S7基因片段相似度分别为87.49%和87.39%;与德国BTV分离株S7基因片段相似度为80.70%,其余均无同源性序列。中国新疆分离株S7基因片段序列与4条同源序列间存在26处核苷酸差异,9处氨基酸差异。【结论】建立的蓝舌病中国新疆分离株S7基因片段一步法RT-PCR方法具有良好的特异性,仅BTV中国新疆分离株扩增获得目的条带,该方法的敏感性为4.0×10^(3)copies/mL。 展开更多
关键词 蓝舌病 VP7蛋白 rt-pcr
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河南郑州桃园桃病毒T的RT-PCR检测
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作者 王新卫 刘立立 +6 位作者 方伟超 陈昌文 朱更瑞 曹珂 李勇 吴金龙 王力荣 《中国果树》 2024年第9期86-89,共4页
通过选取河南省郑州市周边桃园生长不正常的树体叶片,进行RT-PCR检测桃病毒T的感染。结果表明,18份样品中检测到了6份样品存在病毒感染,检出率为33.3%。检出病毒的桃树样品分布在新郑市多个乡镇的果园,共有5个品种检出病毒;来自巩义市... 通过选取河南省郑州市周边桃园生长不正常的树体叶片,进行RT-PCR检测桃病毒T的感染。结果表明,18份样品中检测到了6份样品存在病毒感染,检出率为33.3%。检出病毒的桃树样品分布在新郑市多个乡镇的果园,共有5个品种检出病毒;来自巩义市的样品未检测出桃病毒T。检出病毒的桃品种既有生产上的老品种,又有近几年栽植的新品种。结合多个桃园的病毒检出,说明病毒T已在生产中存在较长时间,并在局部区域呈扩散趋势。 展开更多
关键词 桃园 病毒病防控 rt-pcr 桃病毒T(PVT) 感染
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猪流行性腹泻病毒变异毒株一步法RT-PCR鉴别检测方法的建立及临床应用
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作者 龚婷 马辉 +1 位作者 郭宏伟 郑鸣 《黑龙江畜牧兽医》 CAS 北大核心 2024年第7期18-22,29,共6页
为了建立一种快速鉴别检测猪流行性腹泻病毒(PEDV)变异毒株的病原学方法和掌握洛阳市PEDV变异毒株的流行规律,试验根据GenBank中PEDV变异毒株的特异性序列设计引物,通过优化退火温度、模板添加量、引物添加量建立PEDV变异毒株一步法RT-... 为了建立一种快速鉴别检测猪流行性腹泻病毒(PEDV)变异毒株的病原学方法和掌握洛阳市PEDV变异毒株的流行规律,试验根据GenBank中PEDV变异毒株的特异性序列设计引物,通过优化退火温度、模板添加量、引物添加量建立PEDV变异毒株一步法RT-PCR鉴别检测方法,并分析了该方法的特异性、敏感性和重复性;同时应用该方法检测采集自洛阳市的251份临床样品,并对不同地区、不同年份、不同养殖模式的检测结果进行比较分析。结果表明:优化后的退火温度为51℃,模板添加量为5μL,引物添加量为0.5μL;该方法对PEDV变异毒株能够扩增出550 bp特异性条带,而检测的PEDV经典毒株、猪传染性胃肠炎病毒(TGEV)、猪轮状病毒(RV)、猪繁殖与呼吸综合征病毒(PRRSV)、猪瘟病毒(CSFV)、猪细小病毒(PPV)、猪伪狂犬病病毒(PRV)、猪圆环病毒2型(PCV-2)均为阴性;对PEDV变异毒株RNA的最低检测限达到0.74 ng,对3份PEDV变异毒株阳性病料和3份PEDV变异毒株阴性病料重复检测3次的结果完全一致;检测采集于洛阳市251份临床样品的平均阳性率为29.48%,其中不同地区阳性率介于13.33%~44.44%之间,2018—2022年阳性率介于28.30%~31.58%之间,散养户和规模化猪场的阳性率分别为38.24%和19.13%。说明试验建立的PEDV变异毒株一步法RT-PCR鉴别检测方法特异、敏感、稳定、准确,洛阳市PEDV变异毒株的流行特点为个别地区较严重的情况、近几年流行率基本持平、散养户流行情况较规模化猪场严重。 展开更多
关键词 猪流行性腹泻病毒 变异毒株 一步法rt-pcr鉴别检测方法 临床应用 流行规律
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猪Linda病毒巢式RT-PCR检测方法的建立
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作者 于浩洋 王彩霞 +5 位作者 仇松寅 刘晓飞 景宏丽 吴绍强 冯春燕 林祥梅 《中国动物检疫》 CAS 2024年第1期95-101,共7页
猪Linda病毒能引起仔猪先天性震颤,严重危害养猪业的发展,目前在我国暂未发现感染病例。本研究根据猪Linda病毒Core-E~(ms)基因序列,设计并合成巢式RT-PCR引物,通过对退火温度、引物浓度等进行优化,建立了猪Linda病毒巢式RT-PCR检测方... 猪Linda病毒能引起仔猪先天性震颤,严重危害养猪业的发展,目前在我国暂未发现感染病例。本研究根据猪Linda病毒Core-E~(ms)基因序列,设计并合成巢式RT-PCR引物,通过对退火温度、引物浓度等进行优化,建立了猪Linda病毒巢式RT-PCR检测方法。结果显示,该方法具有良好的特异性,与非洲猪瘟病毒、猪瘟病毒、猪繁殖与呼吸综合征病毒、猪伪狂犬病病毒、猪圆环病毒2型均无交叉反应;敏感性好,对慢病毒阳性对照品的最低检出限为10~1 copies/μL,比普通RT-PCR灵敏10倍。使用该方法检测模拟病毒样品,发现最低检出限为10~1 TU/mL,与荧光定量RT-PCR方法一致。本研究首次建立了可检测猪Linda病毒的巢式RT-PCR方法,其特异性强、灵敏度高,为在口岸以及条件有限的场地对猪Linda病毒进行精准且快速的检测提供了有效技术手段,也为防范Linda病毒传入提供了有力技术支撑。 展开更多
关键词 猪Linda病毒 巢式rt-pcr 检测方法 非典型瘟病毒
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帕利亚姆病毒实时荧光定量RT-PCR检测方法的建立与应用
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作者 杨恒 李占鸿 +5 位作者 宋子昂 高林 李卓然 廖德芳 肖雷 李华春 《畜牧兽医学报》 CAS CSCD 北大核心 2024年第1期395-400,共6页
本研究拟建立帕利亚姆病毒(Palyam virus,PALV)血清型特异性实时荧光定量RT-PCR(qRT-PCR)方法用于临床样本或媒介中PALV血清型鉴定。根据我国流行PALV毒株的基因节段2序列,设计扩增引物和TaqMan探针,建立PALV血清型特异型qRT-PCR方法,... 本研究拟建立帕利亚姆病毒(Palyam virus,PALV)血清型特异性实时荧光定量RT-PCR(qRT-PCR)方法用于临床样本或媒介中PALV血清型鉴定。根据我国流行PALV毒株的基因节段2序列,设计扩增引物和TaqMan探针,建立PALV血清型特异型qRT-PCR方法,对方法的特异性、灵敏性与重复性进行评估;以我国分离的28株PALV和90份核酸阳性血液样本评估检测方法的可靠性;利用建立的方法对采集库蠓样本中携带的PALV进行血清型鉴定。结果显示,建立的PALV血清型qRT-PCR检测方法具有良好的特异性与灵敏性,可检出核酸拷贝数下限在22至28 copies·μL^(-1)。对28株PALV的qRT-PCR检测结果与病毒测序鉴定结果一致;对PALV不同感染阶段哨兵动物血液(90份)中的qRT-PCR鉴定结果与分离病毒的血清型鉴定结果一致;建立的方法可准确鉴定库蠓中携带PALV的血清型。本研究建立的PALV血清型qRT-PCR定型方法具有良好的特异强、敏感性与重复性,可用于PALV感染动物与媒介中PALV血清型的鉴定,具有良好的应用价值。 展开更多
关键词 帕利亚姆病毒 血清型鉴定 实时荧光定量rt-pcr 检测方法
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基于RT-PCR方法对河北省桃病毒和类病毒种类的调查鉴定
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作者 荣春蕊 李晓颍 +7 位作者 苏凯 张晨光 肖坤 李刚 武军凯 肖啸 张立彬 刘春生 《中国果树》 2024年第8期94-97,103,共5页
病毒是造成桃果实产量和品质下降的原因之一,RT-PCR是检测病毒的常用分子生物学方法。利用RT-PCR方法对河北省113份桃样品进行了13种病毒的检测,结果表明,检测到的10种病毒包括ACLSV、PBNSPaV、HSVd、NSPaV、PNRSV、PaLV、PLMVD、APCLSV... 病毒是造成桃果实产量和品质下降的原因之一,RT-PCR是检测病毒的常用分子生物学方法。利用RT-PCR方法对河北省113份桃样品进行了13种病毒的检测,结果表明,检测到的10种病毒包括ACLSV、PBNSPaV、HSVd、NSPaV、PNRSV、PaLV、PLMVD、APCLSV、PeVD和PPV,其中ACLSV检测率最高,其次是PBNSPaV和HSVd 2种病毒。病毒具有复合侵染的现象,三重侵染和四重侵染的检测率最高,没有检测到不被病毒侵染和单一侵染的样品。研究结果为河北省桃病毒脱除、无病毒苗木繁育奠定了理论基础。 展开更多
关键词 河北省 病毒 rt-pcr
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鸽微RNA病毒实时荧光定量RT-PCR检测方法的建立
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作者 张靖鹏 陈翠腾 +5 位作者 林琳 付环茹 李兆龙 江斌 黄瑜 万春和 《畜牧兽医学报》 CAS CSCD 北大核心 2024年第2期860-866,共7页
旨在建立鸽微RNA病毒(pigeon megrivirus,PiMeV)实时荧光定量RT-PCR检测方法。本研究根据GenBank中PiMeVs序列特征设计特异性检测引物,从信鸽粪便中检测到PiMeV阳性(命名为PiMeV-CHN001株),并对其3 C基因进行核苷酸同源性比较和遗传进... 旨在建立鸽微RNA病毒(pigeon megrivirus,PiMeV)实时荧光定量RT-PCR检测方法。本研究根据GenBank中PiMeVs序列特征设计特异性检测引物,从信鸽粪便中检测到PiMeV阳性(命名为PiMeV-CHN001株),并对其3 C基因进行核苷酸同源性比较和遗传进化分析,明确其基因特征后,设计特异性实时荧光定量RT-PCR检测(RT-qPCR)引物组,建立检测PiMeV的RT-qPCR方法。结果显示:PiMeV-CHN001株3 C基因全长为591 bp,编码197个氨基酸,和其他2株野鸽源PiMeV(MeV-B1株和MeV-B2株)核苷酸相似性分别为89.5%和92.0%。建立的检测PiMeV的RT-qPCR方法的标准曲线Y轴截距为37.93,斜率为-3.335,相关系数为1.00,扩增效率为99.4%。特异性强,仅PiMeV出现特异性扩增信号和特异性峰值[Tm值为(81.69±0.22)℃],对鸽源禽流感病毒(avian influenza virus,AIV)、鸽源禽I型副黏病毒(pigeon paramyxovirus type I,PPMV-1)、鸽输血传播病毒(pigeon torque teno virus,PTTV)、鸽腺病毒(pigeon adenovirus,PiAd)及鸽圆环病毒(pigeon circovirus,PiCV)检测均未见特异性扩增信号;敏感性优,最低检测限为54.0拷贝·μL^(-1);重复性好,批内和批间变异系数均低于1.5%。用建立的检测方法对42份信鸽粪便样品进行检测,发现2份阳性样品(阳性率为4.76%)。本研究首次证实我国大陆地区信鸽中存在PiMeV,丰富了PiMeV宿主谱信息;建立的RT-qPCR方法为后续开展PiMeV流行病学研究提供支撑。 展开更多
关键词 信鸽 鸽微RNA病毒 3 C基因 序列分析 实时荧光定量rt-pcr方法
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