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Quantitative trait loci identification reveals zinc finger protein CONSTANS-LIKE 4 as the key candidate gene of stigma color in watermelon(Citrullus lanatus)
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作者 Shuang Pei Zexu Wu +4 位作者 Ziqiao Ji Zheng Liu Zicheng Zhu Feishi Luan Shi Liu 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2024年第7期2292-2305,共14页
Stigma color is a critical agronomic trait in watermelon that plays an important role in pollination.However,there are few reports on the regulation of stigma color in watermelon.In this study,a genetic analysis of th... Stigma color is a critical agronomic trait in watermelon that plays an important role in pollination.However,there are few reports on the regulation of stigma color in watermelon.In this study,a genetic analysis of the F2 population derived from ZXG1553(P1,with orange stigma)and W1-17(P2,with yellow stigma)indicated that stigma color is a quantitative trait and the orange stigma is recessive compared with the yellow stigma.Bulk segregant analysis sequencing(BSA-seq)revealed a 3.75 Mb segment on chromosome 6 that is related to stigma color.Also,a major stable effective QTL Clqsc6.1(QTL stigma color)was detected in two years between cleaved amplified polymorphic sequencing(CAPS)markers Chr06_8338913 and Chr06_9344593 spanning a~1.01 Mb interval that harbors 51 annotated genes.Cla97C06G117020(annotated as zinc finger protein CONSTANS-LIKE 4)was identified as the best candidate gene for the stigma color trait through RNA-seq,quantitative real-time PCR(qRT-PCR),and gene structure alignment analysis among the natural watermelon panel.The expression level of Cla97C06G117020 in the orange stigma accession was lower than in the yellow stigma accessions with a significant difference.A nonsynonymous SNP site of the Cla97C06G117020 coding region that causes amino acid variation was related to the stigma color variation among nine watermelon accessions according to their re-sequencing data.Stigma color formation is often related to carotenoids,and we also found that the expression trend of ClCHYB(annotated asβ-carotene hydroxylase)in the carotenoid metabolic pathway was consistent with Cla97C06G117020,and it was expressed in low amounts in the orange stigma accession.These data indicated that Cla97C06G117020 and ClCHYB may interact to form the stigma color.This study provides a theoretical basis for gene fine mapping and mechanisms for the regulation of stigma color in watermelon. 展开更多
关键词 WATERMELON stigma color gene mapping zinc finger protein CONSTANS-LIKE 4
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PbrARF4 contributes to calyx shedding of fruitlets in ‘Dangshan Suli’ pear by partly regulating the expression of abscission genes
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作者 Guoling Guo Pengfei Wei +5 位作者 Tao Yu Haiyan Zhang Wei Heng Lun Liu Liwu Zhu Bing Jia 《Horticultural Plant Journal》 SCIE CAS CSCD 2024年第2期341-354,共14页
Fruitlet calyx shedding in pear plants is apparently regulated via numerous pathways that involve both environmental triggers and phytohormones cues such as auxin. In this study, we found at 10 days after full bloom (... Fruitlet calyx shedding in pear plants is apparently regulated via numerous pathways that involve both environmental triggers and phytohormones cues such as auxin. In this study, we found at 10 days after full bloom (DAFB) higher levels of indoleacetic acid (IAA) and tryptophan (Trp) in calyx persistence fruitlet (CPF) than calyx shedding fruitlet (CSF) ofDanshan Suli’ pear (Pyrus bretschneideri Rhed.). Consisting with this, the activity of indolealdehyde oxidase (IAAIdO), which promotes IAA synthesis, was remarkably increased, and that of peroxidase(POD), which degrades IAA, dropped markedly in CPF but not in CSF. Further, qRT-PCR results revealed that most of 31 PbrARFs (encoding auxin response factors) in Pyrus bretschneideri were highly expressed in CPF, whereas PbrARF4, PbrARF24 and PbrARF26 were significantly downregulated in CPF vis-a-vis CSF. Phylogenetic analysis revealed that 6 PbrARFs clustered in the group III, where PbrARF4 showed the closest affinity with AtARF1 that promotes organ abscission, indicating a putative role of PbrARF4 in mediating the process of calyx shedding in pear. In fact, the ectopic overexpression of PbrARF4 in Solanum lycopersicum resulted in an earlier-formed and deeper abscission layer (AL) in the transgenic plants, whose calyxes were more prone to wilt at the mature red stage (MR) compared with the control plants (wild-type). More importantly, expression levels of the abscission genes SILS and Sl Cel2 in transgenic plants overexpressing PbrARF4 were significantly upregulated in comparation with the WT, whereas those of Sl BI and Sl TAPG2 were considerably inhibited. Further, PbrJOINTLESS and PbrIDA,the two genes related to calyx shedding in pear, were up-regulated more in CSF than CPF. The findings contribute to a better understanding of PbrARFs involved in fruitlet calyx shedding of pear, which could prove beneficial to improving the quality of pear fruit. 展开更多
关键词 PEAR Pyrus bretschneideri Rehd Calyx shedding IAA PbrARF4 Abscission genes
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Cellular Senescence and SENEX Gene on the Peripheral CD4+CD25+ Treg Cells Enhancement in Elderly
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作者 Mengxin Wen Jing Chai Beng Wen 《Journal of Biosciences and Medicines》 2024年第2期70-79,共10页
Cellular senescence is a signal transduction process which maintained genomic stability and stopped mammalian cell growth. Furthermore, cellular senescence induces a protective response to a variety of DNA damage. How... Cellular senescence is a signal transduction process which maintained genomic stability and stopped mammalian cell growth. Furthermore, cellular senescence induces a protective response to a variety of DNA damage. However, this process is also associated with apoptosis, upregulated secretion of inflammatory cytokine, and promoted surrounding tissue damage. When cellular senescence accumulates to a certain extent, it triggers geriatric diseases, such as chronic inflammation, immune senescence-associated tumors and incontrollable infections. Cellular senescence gene SENEX, which was cloned in 2004, has been demonstrated to play a unique gatekeeper function in human endothelial cells when stress-induced pre-mature senescence and apoptosis occurr. The phenomenon that CD4+CD25+ Treg cells accumulated in the aged population has been well studied in recent years. Now Treg accumulation related to immune-pathology has attracted more interest. CD4+CD25+ Treg did not decline and age, but accumulated and suppressed immunoreaction. The enhanced Treg number and function may be associated with stress-induced premature senescence-mediated unique cellular senescence protection mechanisms, and SENEX may play a critical role in this process. In this article, we summarize the cellular senescence and SENEX gene in the accumulation and functional activity of CD4+CD25+ Treg in the elderly. 展开更多
关键词 Cellular Senescence gene SENEX CD4 CD25 Treg ELDER
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血清4型禽腺病毒的分离鉴定及致病性分析
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作者 田光明 张高峰 +7 位作者 杨俊杰 杨宏春 蒋立人 王鑫 陈俊池 商雨 温国元 罗青平 《畜牧与兽医》 CAS 北大核心 2024年第9期75-83,共9页
旨在从送检的病鸡中分离鉴定出禽腺病毒(fowl adenovirus,FAdV),为临床诊断和疫病防控提供参考依据。本研究将阳性样品接种SPF鸡胚并传代,利用PCR检测、基因序列分析、动物回归试验等方法鉴定病毒。结果:经过鸡胚传代及病毒特异性检测... 旨在从送检的病鸡中分离鉴定出禽腺病毒(fowl adenovirus,FAdV),为临床诊断和疫病防控提供参考依据。本研究将阳性样品接种SPF鸡胚并传代,利用PCR检测、基因序列分析、动物回归试验等方法鉴定病毒。结果:经过鸡胚传代及病毒特异性检测获得了纯净的FAdV,命名为HB2306;分析Hexon基因序列可知,HB2306株属于血清4型分支,与国内外分离的FAdV-4毒株核苷酸序列同源性为98.2%~99.9%,HB2306株与国内外的4型高致病性毒株氨基酸序列相似性在97.9%~99.8%;受试动物临床病理变化显示,HB2306株以104.5EID50/只的剂量经胸部肌肉注射后,引起宿主心包积液,肝脏变黄肿胀、淤血出血,肾出血、肿胀等典型的病理变化,与流行的高致病性毒株所致临床症状相似,且死亡率为100%。综上,本研究成功分离并鉴定出一株FAdV-4高致病力毒株,丰富了毒种库,为该病毒感染的流行情况调查和综合防控奠定了基础。 展开更多
关键词 禽腺病毒4 致病性 Hexon基因 遗传进化
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香蕉枯萎病菌内源报告基因Foc4carS的鉴定及其应用
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作者 彭军 曾凡云 +5 位作者 王艳玮 漆艳香 丁兆建 王少伶 谢艺贤 张欣 《热带作物学报》 CSCD 北大核心 2024年第5期873-885,共13页
香蕉枯萎病是由尖孢镰刀菌古巴转化型(Fusarium oxysporum f. sp. cubense, Foc)引起的香蕉毁灭性土传病害,其中4号生理小种(Foc4)能感染几乎所有的香蕉品系,危害最严重。carS基因通过调控下游car结构基因参与调控镰刀菌类胡萝卜素的生... 香蕉枯萎病是由尖孢镰刀菌古巴转化型(Fusarium oxysporum f. sp. cubense, Foc)引起的香蕉毁灭性土传病害,其中4号生理小种(Foc4)能感染几乎所有的香蕉品系,危害最严重。carS基因通过调控下游car结构基因参与调控镰刀菌类胡萝卜素的生物合成,本研究克隆鉴定了Foc4carS基因(FOIG_05085),Foc4carS蛋白具有典型的RING-finger蛋白结构域。利用分割标记法(Split-marker PCR)获得Foc4carS基因的融合片段,同时构建含有Foc4carS基因sgRNA591序列的pUC-fFuCas9-HTBNLS-hph-Foc4carS基因编辑载体,通过PEG介导的原生质体转化获得该基因的敲除突变体、回补突变体以及基因编辑敲除体,并对敲除和回补突变体的生物学特性和致病力进行分析。结果显示:ΔFoc4carS突变体的菌落直径、产孢量和致病力等生物学表型与野生菌株Foc4无显著差异,而ΔFoc4carS突变体菌落颜色呈深橙色,Foc4carS基因的缺失影响了次生代谢产物类胡萝卜素的生物合成;基因编辑的ΔFoc4carS(HDR)突变体不论是再生筛选板还是继代后的PDA平板,其菌落均出现典型的深橙色,表明Foc4carS可作为内源报告基因,在香蕉枯萎菌Foc4中进行基因质粒型CRISPR/Cas9编辑可行。 展开更多
关键词 香蕉枯萎菌Foc4 Foc4carS基因 类胡萝卜素 基因敲除 CRISPR/Cas9基因编辑
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冠脉支架内再狭窄患者TLR4基因rs4986790、rs4986791位点多态性及其与临床关系的研究
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作者 黄达 潘兴寿 +3 位作者 邹才华 梁烨 李天资 李近都 《中国医药科学》 2024年第16期141-146,共6页
目的 探讨冠脉支架内再狭窄(ISR)患者Toll样受体4(TLR4)外显子基因突变情况及其与临床的关系。方法 选取2019年1月至2022年12月在右江民族医学院附属医院治疗的ISR患者137例,检测体重指数(BMI)、血压、血脂、血糖、血尿酸、C反应蛋白(C... 目的 探讨冠脉支架内再狭窄(ISR)患者Toll样受体4(TLR4)外显子基因突变情况及其与临床的关系。方法 选取2019年1月至2022年12月在右江民族医学院附属医院治疗的ISR患者137例,检测体重指数(BMI)、血压、血脂、血糖、血尿酸、C反应蛋白(CRP)、β2微球蛋白(β2MG)、白细胞介素6(IL-6)和TLR4基因rs4986790、rs4986791位点碱基。并与131例同期行冠脉支架植入术支架内无再狭窄(NISR)患者比较。结果 ISR组患者BMI、收缩压、总胆固醇、甘油三酯、空腹血糖、血尿酸、CRP、β2MG和IL-6水平高于NISR组(P <0.05);ISR组TLR4基因rs4986790位点碱基突变率高于NISR组(P <0.05),TLR4基因rs4986791位点碱基突变率高于NISR组(P <0.05);TLR4基因突变表型组BMI、收缩压、总胆固醇、甘油三酯、空腹血糖、血尿酸、CRP、β2MG和IL-6水平高于TLR4野生表型组(P <0.05)。结论 冠脉支架内再狭窄患者TLR4基因外显子突变率高,TLR4基因外显子突变的患者其代谢和炎症因子异常情况有叠加作用。 展开更多
关键词 冠状动脉狭窄 介入治疗反应 支架内再狭窄 Toll受体4 基因突变
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Regenerating gene 4 promotes chemoresistance of colorectal cancer by affecting lipid droplet synthesis and assembly 被引量:2
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作者 Cong-Yu Zhang Rui Zhang +4 位作者 Li Zhang Zi-Mo Wang Hong-Zhi Sun Zheng-Guo Cui Hua-Chuan Zheng 《World Journal of Gastroenterology》 SCIE CAS 2023年第35期5104-5124,共21页
BACKGROUND Regenerating gene 4(REG4)has been proved to be carcinogenic in some cancers,but its manifestation and possible carcinogenic mechanisms in colorectal cancer(CRC)have not yet been elucidated.Our previous stud... BACKGROUND Regenerating gene 4(REG4)has been proved to be carcinogenic in some cancers,but its manifestation and possible carcinogenic mechanisms in colorectal cancer(CRC)have not yet been elucidated.Our previous study found that the drug resistance of CRC cells may be closely linked to their fat metabolism.AIM To explore the role of REG4 in CRC and its association with lipid droplet formation and chemoresistance.METHODS We conducted a meta-analysis and bioinformatics and pathological analyses of REG4 expression in CRC.The effects of REG4 on the phenotypes and related protein expression were also investigated in CRC cells.We detected the impacts of REG4 on the chemoresistance and lipid droplet formation in CRC cells.Finally,we analyzed how REG4 regulated the transcription and proteasomal degradation of lipogenic enzymes in CRC cells.RESULTS Compared to normal mucosa,REG4 mRNA expression was high in CRC(P<0.05)but protein expression was low.An inverse correlation existed between lymph node and distant metastases,tumor-node-metastasis staging or short overall survival and REG4 mRNA overexpression(P<0.05),but vice versa for REG4 protein expression.REG4-related genes included:Chemokine activity;taste receptors;protein-DNA and DNA packing complexes;nucleosomes and chromatin;generation of second messenger molecules;programmed cell death signals;epigenetic regulation and DNA methylation;transcription repression and activation by DNA binding;insulin signaling pathway;sugar metabolism and transfer;and neurotransmitter receptors(P<0.05).REG4 exposure or overexpression promoted proliferation,antiapoptosis,migration,and invasion of DLD-1 cells in an autocrine or paracrine manner by activating the epidermal growth factor receptor-phosphoinositide 3-kinase-Akt-nuclear factor-κB pathway.REG4 was involved in chemoresistance not through de novo lipogenesis,but lipid droplet assembly.REG4 inhibited the transcription of acetyl-CoA carboxylase 1(ACC1)and ATP-citrate lyase(ACLY)by disassociating the complex formation of anti-acetyl(AC)-acetyl-histone 3-AC-histone 4-inhibitor of growth protein-5-si histone deacetylase;-sterol-regulatory element binding protein 1 in their promoters and induced proteasomal degradation of ACC1 or ACLY.CONCLUSION REG4 may be involved in chemoresistance through lipid droplet assembly.REG4 reduces expression of de novo lipid synthesis key enzymes by inhibiting transcription and promoting ubiquitination-mediated proteasomal degradation. 展开更多
关键词 Colorectal cancer Regenerating gene 4 Aggressive behavior PROGNOSIS CHEMORESISTANCE Lipid droplet formation Epidermal growth factor receptor signal
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LIPI-3和LIPI-4共存对致病性单核细胞增生李斯特菌毒力的影响
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作者 钱瑞宣 李楠 +11 位作者 康立超 马勋 刘彩霞 史唯地 寇丽君 任慧杰 祁亚涛 殷中科 刘璐 王静 王正荣 蒋建军 《中国畜牧兽医》 CAS CSCD 北大核心 2024年第5期2027-2036,共10页
【目的】探究单核细胞增生李斯特菌(Listeria monocytogenes,LM)毒力岛3(LIPI-3)和LIPI-4共存对LM毒力的影响,揭示它们对细菌毒力的潜在调节作用,为进一步研究LM的致病机制提供依据。【方法】以LM928(存在LIPI-4)和LM873(同时存在LIPI-3... 【目的】探究单核细胞增生李斯特菌(Listeria monocytogenes,LM)毒力岛3(LIPI-3)和LIPI-4共存对LM毒力的影响,揭示它们对细菌毒力的潜在调节作用,为进一步研究LM的致病机制提供依据。【方法】以LM928(存在LIPI-4)和LM873(同时存在LIPI-3和LIPI-4)2个LM菌株为研究对象,通过侵染HCMEC/D3细胞监测2种菌株对HCMEC/D3细胞的黏附和侵袭情况;通过鸡胚感染试验评估2株菌对鸡胚半数致死量(LD 50)的影响;采用溶血试验来测定菌株的溶血活性;通过流式细胞仪分析HCMEC/D3细胞凋亡情况,以评估菌株诱导细胞凋亡的能力;利用实时荧光定量PCR技术比较2株菌在BHI培养条件下及感染HCMEC/D3细胞后毒力基因的转录水平差异。【结果】LM928和LM873株的黏附率无显著差异(P>0.05),LM928株的侵袭率极显著高于LM873株(P<0.01)。LM873株的LD 50是LM928株的约1000倍;LM928和LM873株的溶血价分别为24和23。LM928株感染24和48 h后诱导的细胞凋亡率显著或极显著高于LM873株(P<0.05;P<0.01),而LM873株的凋亡率与对照组间无显著差异(P>0.05)。LM928和LM873株在BHI培养基中培养时,与LM928株相比,LM873株毒力基因mpl、inlB、inlC、inlP、actA、plcA、plcB和sigB的转录水平均显著或极显著上调(P<0.05;P<0.01),毒力基因hly、inlA和iap的转录水平均极显著或显著下调(P<0.01;P<0.05)。LM928和LM873株侵染HCMEC/D3细胞后,与LM928株相比,LM873株毒力基因inlP、actA、plcA、plcB和prfA的转录水平均显著或极显著上调(P<0.05;P<0.01);毒力基因hly、mpl、inlA、inlB、inlC和iap的转录水平均极显著下调(P<0.01)。【结论】LIPI-3和LIPI-4共存降低了LM的毒力,该结果对进一步研究LIPI-3和LIPI-4在细菌毒力调控中的分子机制和复杂的相互作用具有重要意义。 展开更多
关键词 单核细胞增生李斯特菌(LM) LIPI-3 LIPI-4 毒力 毒力基因
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An Investigation of the Effects of B7-H4 Gene rs10754339 and miR-125a Gene rs12976445 on Cancer Susceptibility
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作者 JIN Yu Chen DONG Li Juan +6 位作者 YANG Qin Yue XIONG Wei Ning WANG Wei Yi FENG Xian Hong YU Wei HUANG Wei CHEN Bi Feng 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2023年第9期814-825,共12页
Objective To investigate the effects of the B7-H4 gene rs10754339 and miR-125a gene rs12976445 on cancer susceptibility through a case-control study and meta-analysis.Methods A total of 1,490 cancer patients(lung/gast... Objective To investigate the effects of the B7-H4 gene rs10754339 and miR-125a gene rs12976445 on cancer susceptibility through a case-control study and meta-analysis.Methods A total of 1,490 cancer patients(lung/gastric/liver/:550/460/480)and 800 controls were recruited in this case-control study.The meta-analysis was performed by pooling the data from previous related studies and the present study.Results The results of this study showed that in the Hubei Han Chinese population,the rs10754339gene was significantly associated with the risk of lung and gastric cancer but not liver cancer,and the rs12976445 gene was significantly associated with the risk of lung cancer but not liver or gastric cancer.The meta-analysis results indicated that rs10754339 and rs12976445 contributed to cancer susceptibility in the Chinese population and also revealed a significant association between rs10754339and breast cancer risk,as well as between rs12976445 and lung cancer risk.Conclusion The B7-H4 gene rs10754339 and miR-125a gene rs12976445 may be the potential genetic markers for cancer susceptibility in the Chinese population,which should be validated in future studies with larger sample sizes in other ethnic populations. 展开更多
关键词 B7-H4 gene miR-125a gene rs10754339 rs12976445 Cancer susceptibility
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TCF4基因突变致皮特-霍普金斯综合征2例报告并文献复习
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作者 陶茜 霍洪亮 +4 位作者 夏秦 吉永春 张何威 曹徐君 顾琴 《医学综述》 CAS 2024年第14期1781-1786,共6页
目的总结分析2例特殊皮特-霍普金斯综合征(PTHS)患儿的临床特征和基因突变。方法对2例PTHS患儿的临床资料和基因测序结果进行回顾分析,并复习典型临床表现相关的病例报道及相关文献。结果2例PTHS患儿均为男性,表现为特殊面容,发育迟缓... 目的总结分析2例特殊皮特-霍普金斯综合征(PTHS)患儿的临床特征和基因突变。方法对2例PTHS患儿的临床资料和基因测序结果进行回顾分析,并复习典型临床表现相关的病例报道及相关文献。结果2例PTHS患儿均为男性,表现为特殊面容,发育迟缓。头颅磁共振成像、脑电图、血液生化检查、外周血染色体、血尿遗传代谢筛查均无异常。第1例患儿2岁,基因测序结果显示转录因子4(TCF4)基因17外显子区域杂合变异,为首次报道致病的新发突变c.1504C>T,可导致氨基酸p.Q502*改变。第2例患儿10岁,基因测序结果显示TCF4基因12外显子区域新发变异,c.990G>A,可导致氨基酸p.Ser330=改变。检索到相关文献110篇,纳入文献复习15篇,报道40种TCF4基因突变,分别位于外显子7~19,涉及缺失突变、插入突变、无义突变、剪切突变和错义突变。结论2例首次报道的TCF4基因突变位点丰富了PTHS的基因变异谱,为临床诊断和遗传咨询提供依据。 展开更多
关键词 皮特-霍普金斯综合征 转录因子4基因突变 儿童
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基于CRISPR/Cas9技术构建猪KLF4基因敲除细胞系及其对细胞活性的影响分析
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作者 董娇 陆繁 +3 位作者 方晓敏 陈瑜哲 包文斌 王海飞 《中国畜牧兽医》 CAS CSCD 北大核心 2024年第3期893-902,共10页
【目的】试验旨在利用CRISPR/Cas9技术构建Krüppel样因子4(Krüppel-like factor 4,KLF4)基因敲除的猪小肠上皮细胞,并探究KLF4基因敲除对于细胞活性和细胞周期的影响。【方法】在猪KLF4基因转录本第1外显子区域设计3条sgRNAs(... 【目的】试验旨在利用CRISPR/Cas9技术构建Krüppel样因子4(Krüppel-like factor 4,KLF4)基因敲除的猪小肠上皮细胞,并探究KLF4基因敲除对于细胞活性和细胞周期的影响。【方法】在猪KLF4基因转录本第1外显子区域设计3条sgRNAs(sgRNA1、sgRNA2和sgRNA3),经退火形成的双链DNA与线性化pGK1.1载体连接,产物转化大肠杆菌Top10感受态细胞进行鉴定,并将重组载体转染至猪小肠上皮细胞(IPEC-J2)。PCR扩增敲除位点附近序列,并通过测序判断sgRNA敲除效率;利用CruiserTMEnzyme酶切鉴定阳性细胞克隆,通过TA克隆测序鉴定敲除序列;利用Western blotting检测基因敲除细胞中KLF4蛋白表达情况。利用CCK-8和流式细胞术检测KLF4基因敲除后细胞活性和细胞周期的变化。【结果】重组载体测序结果显示,sgRNAs与pGK1.1成功连接。分析敲除效率发现,3个sgRNAs均可对靶序列进行敲除,其中sgRNA3有较高的敲除效率。PCR产物经CruiserTMEnzyme酶切筛选出2个阳性单克隆细胞。TA克隆测序分析发现,KLF4基因2个等位基因序列分别缺失116和137 bp。Western blotting结果表明,KLF4基因敲除细胞中未见KLF4蛋白表达。细胞活性及细胞周期分析显示,敲除KLF4基因极显著抑制了细胞活性(P<0.01),并导致G0/S细胞周期阻滞。【结论】本研究利用CRISPR/Cas9技术构建了KLF4基因敲除的IPEC-J2细胞,且KLF4基因敲除可抑制细胞活性,并引起G0/S细胞周期阻滞。KLF4基因敲除细胞可为进一步探究KLF4基因功能及分子机制提供材料。 展开更多
关键词 KLF4基因 CRISPR/Cas9技术 细胞活性 细胞周期
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陆地棉4-香豆酸辅酶A连接酶基因Gh4CL30的功能分析
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作者 巩隽铭 熊显鹏 +3 位作者 张彩霞 邵东南 程帅帅 孙杰 《新疆农业科学》 CAS CSCD 北大核心 2024年第6期1301-1309,共9页
【目的】研究4-香豆酸辅酶A连接酶(4CL)家族基因Gh4CL30的生物学功能,为棉花株型育种提供理论依据和基因种质资源。【方法】利用病毒诱导的基因沉默技术和基因编辑技术获得Gh4CL30沉默和编辑植株,测定该基因抑制及敲除植株的黄酮和木质... 【目的】研究4-香豆酸辅酶A连接酶(4CL)家族基因Gh4CL30的生物学功能,为棉花株型育种提供理论依据和基因种质资源。【方法】利用病毒诱导的基因沉默技术和基因编辑技术获得Gh4CL30沉默和编辑植株,测定该基因抑制及敲除植株的黄酮和木质素含量,调查棉花田间表型性状、种子大小和纤维品质。【结果】Gh4CL30基因沉默和敲除植株中木质素合成相关基因表达量显著下降,4-香豆酸辅酶A连接酶含量显著减少,茎秆中木质素含量显著降低,其株高、种子大小和纤维长度显著降低。【结论】Gh4CL30通过调控棉花木质素生物合成功能影响其生长发育。 展开更多
关键词 陆地棉 4-香豆酸辅酶A连接酶 木质素 基因编辑 株高
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三角梅二氢黄酮醇-4-还原酶基因的克隆及表达特异性分析
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作者 孙蓉 刘桃 +3 位作者 潘凯越 刘姗 刁毅 曾道萍 《福建农业学报》 CAS CSCD 北大核心 2024年第1期33-39,共7页
【目的】克隆分析三角梅(Bougainvillea spectabilis)二氢黄酮醇-4-还原酶(Dihydroflavonol-4-reductase,DFR)基因(BsDFR),探讨其在三角梅苞片呈色中的作用。【方法】基于三角梅转录组数据,利用PCR技术克隆BsDFR基因,并通过生物信息学... 【目的】克隆分析三角梅(Bougainvillea spectabilis)二氢黄酮醇-4-还原酶(Dihydroflavonol-4-reductase,DFR)基因(BsDFR),探讨其在三角梅苞片呈色中的作用。【方法】基于三角梅转录组数据,利用PCR技术克隆BsDFR基因,并通过生物信息学工具分析其分子特性;通过分子对接技术预测BsDFR底物特异性;采用实时荧光定量PCR分析该基因在不同颜色三角梅中的表达量差异。【结果】三角梅BsDFR基因(GenBank ID:ON417750)编码区全长987 bp,编码328个氨基酸。BsDFR理论相对分子质量为36.48 kDa,等电点pI为6.33;具有DFR特有的NADPH及底物特异结合位点,属于Asn型DFR;不具有跨膜结构及信号肽,定位于细胞质中;二级结构中α螺旋占比最多,三级结构预测显示为二聚体蛋白。底物对接模拟预测BsDFR对二氢山柰酚(Dihydrokaempferol,DHK)、二氢槲皮素(Dihydroquercetin, DHQ)和二氢杨梅素(Dihydromyricetin, DHM)3种底物均具有催化活性,与结构分析相吻合。进化树分析其与石竹目(Centrospermae)植物聚为一类。qRT-PCR分析发现其在橙色系三角梅中含量较高,进一步推测其主要底物为DHK,催化生成橙色系花青素(天竺葵素)的前体物质——无色天竺葵素苷元。【结论】BsDFR基因是一个典型的植物二氢黄酮醇-4-还原酶基因,主要与橙色系三角梅苞片色素合成有关。 展开更多
关键词 三角梅 BsDFR基因 生物信息学 表达量分析
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乌珠穆沁绵羊ABCD 4基因点突变与多脊椎性状关联性分析
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作者 张越 张敏 +10 位作者 苏红 赵霏霏 王志 乌达巴拉 杨燕燕 李秀男 王大清 周川清 左永春 宋永利 曹贵方 《动物医学进展》 北大核心 2024年第10期34-39,共6页
为研究ABCD4基因在乌珠穆沁羊群体中基因的多态性与脊椎数的关联,从339只乌珠穆沁绵羊采集静脉血提取DNA,并且通过DR成像检测技术将乌珠穆沁绵羊的胸椎数和腰椎数进行了统计,PCR技术和Sanger测序技术等方法对ABCD 4基因的单核苷酸多态性... 为研究ABCD4基因在乌珠穆沁羊群体中基因的多态性与脊椎数的关联,从339只乌珠穆沁绵羊采集静脉血提取DNA,并且通过DR成像检测技术将乌珠穆沁绵羊的胸椎数和腰椎数进行了统计,PCR技术和Sanger测序技术等方法对ABCD 4基因的单核苷酸多态性(single nucleotide polymorphisms,SNPs)位点分别是SNP1(Chr7:89387652,C>T)和SNP2(Chr7:89393414,G>A)进行了研究。结果表明,SNP1与SNP2位点的突变结果基本一致,统计变异位点基因型以及等位基因型在乌珠穆沁绵羊群体的分布,并与脊椎数进行关联分析。在339只乌珠穆沁绵羊群体中,通过DR成像检测技术,确定出有普通脊椎羊55只,多脊椎羊为284只,通过Sanger测序技术,确定有普通脊椎羊50只,多脊椎羊为289只。SNP1(89387652,C>T)和SNP2(89393414,G>A)位点所检测出基因型与DR检测的吻合率为87.32%。说明关联显著的ABCD4基因的SNPs位点SNP1(Chr7:89387652,C>T)和SNP2(Chr7:89393414,G>A)可以作为乌珠穆沁绵羊脊椎数变异的候选基因功能位点。 展开更多
关键词 乌珠穆沁绵羊 多脊椎性状 ABCD 4基因 DR检测技术 Sanger测序
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ADAMTS3 and FLT4 gene mutations result in congenital lymphangiectasia in newborns:A case report
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作者 Zhu-Wei Liang Wan-Li Gao 《World Journal of Clinical Cases》 SCIE 2023年第21期5179-5186,共8页
BACKGROUND Congenital lymphangiectasia is a rare disease characterized by dilated interstitial lymphatic vessels and cystic expansion of the lymphatic vessels.Congenital lymphangiectasia can affect various organ syste... BACKGROUND Congenital lymphangiectasia is a rare disease characterized by dilated interstitial lymphatic vessels and cystic expansion of the lymphatic vessels.Congenital lymphangiectasia can affect various organ systems;however,it frequently occurs in the lungs accompanied with unexplained pleural effusion.Further,it might not be diagnosed during prenatal examination owing to the absence of pronounced abnormalities.However,after birth the newborn rapidly develops respiratory distress that quickly deteriorates.Genetic variations in proteins controlling the development of lymphatic vessels contribute to the pathophysiology of this disease.We report a rare case of heterozygous mutation of ADAMTS3 and FLT4 genes,which have not been reported previously.CASE SUMMARY We analysed the case of a neonate who had presented with only pleural effusion at a late gestational age and eventually died due to its inability to establish spontaneous breathing after birth.An autopsy revealed lymphangiectasia of the organ systems.Further,whole exome sequencing revealed heterozygous mutations of the lymphangiogenesis-controlling genes,ADAMTS3 and FLT4,and Sanger verification revealed similar lesions in the mother with no symptoms.CONCLUSION Considering the presented case,obstetricians should observe unexplained foetal pleural effusion,and perform pathology analysis and whole exome sequencing for a conclusive diagnosis and prompt treatment. 展开更多
关键词 Congenital lymphangiectasia ADAMTS3 FLT4 gene mutations Foetal pleural effusion Case report
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ABCB4 gene mutation-associated cirrhosis with systemic amyloidosis:A case report
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作者 Na Cheng Yu-Jie Qin +1 位作者 Quan Zhang Hong Li 《World Journal of Clinical Cases》 SCIE 2023年第20期4903-4911,共9页
BACKGROUND Gene mutations in ATP-binding cassette,subfamily B(ABCB4)lead to autosomal recessive disorders.Primary light amyloidosis is a rare and incurable disease.Here,we report a rare case of liver cirrhosis caused ... BACKGROUND Gene mutations in ATP-binding cassette,subfamily B(ABCB4)lead to autosomal recessive disorders.Primary light amyloidosis is a rare and incurable disease.Here,we report a rare case of liver cirrhosis caused by ABCB4 gene mutation combined with primary light amyloidosis.CASE SUMMARY We report a case of a 25-year-old female who was hospitalized due to recurrent abdominal pain caused by calculous cholecystitis and underwent cholecystectomy.Pathological examination of the liver tissue suggested liver cirrhosis with bile duct injury.Exon analyses of the whole genome from the patient’s peripheral blood revealed the presence of a heterozygous mutation in the ABCB4 gene.Bone marrow biopsy tissues,renal puncture examination,and liver mass spectrometry confirmed the diagnosis of a rare progressive familial intrahepatic cholestasis type 3 with systemic light chain type κ amyloidosis,which resulted in cirrhosis.Ursodeoxycholic acid and the cluster of differentiation 38 monoclonal antibody daretozumab were administered for treatment.Following treatment,the patient demonstrated significant improvement.Urinary protein became negative,peripheral blood-free light chain and urine-free light chain levels returned to normal,and the electrocardiogram showed no abnormalities.Additionally,the patient’s lower limb numbness resolved,and her condition remained stable.CONCLUSION This report presents the diagnosis and treatment of liver cirrhosis,a rare disease that is easily misdiagnosed or missed. 展开更多
关键词 ABCB4 gene Progressive familial intrahepatic cholestasis 3 CIRRHOSIS Systemic amyloidosis Case report
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TEAD1/TEAD4基因多态性与非贲门胃癌变关系的研究
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作者 阎小霞 董文杰 +2 位作者 张云翔 高芳 贾彦彬 《安徽医科大学学报》 CAS 北大核心 2024年第5期863-868,共6页
目的探讨TEA转录因子1(TEAD1)基因单核苷酸多态性(SNP)rs2304733、TEA转录因子4(TEAD4)SNPrs7135838和rs1990330与非贲门胃癌变发病风险的关系。方法采用酶联免疫吸附测定法(ELISA)检测正常对照组血清样本中抗幽门螺杆菌(Hp)的特异性抗... 目的探讨TEA转录因子1(TEAD1)基因单核苷酸多态性(SNP)rs2304733、TEA转录因子4(TEAD4)SNPrs7135838和rs1990330与非贲门胃癌变发病风险的关系。方法采用酶联免疫吸附测定法(ELISA)检测正常对照组血清样本中抗幽门螺杆菌(Hp)的特异性抗体,根据抗体滴度将470例正常对照组分为Hp感染阴性组(n=223)和阳性组(n=247)。在450例非贲门胃癌病例组和470例对照组中,采用聚合酶链式反应-限制性片段长度多态性(PCR-RFLP)技术对各SNP位点进行基因分型,采用非条件性Logistic回归评估各SNP位点与非贲门胃癌变发病风险的关系。结果TEAD1、TEAD4各SNP位点均与Hp感染没有关联;TEAD1 rs2304733与非贲门胃癌的发病风险相关,与携带TT基因型者相比,携带CT基因型及CC基因型者均增加了非贲门胃癌的发病风险(CTvsTT:OR=2.321,95%CI:1.690~3.188;CCvsTT:OR=5.140,95%CI:1.080~24.463);TEAD4 rs1990330与非贲门胃癌发病风险相关,与携带GG基因型者相比,携带GT基因型者增加了非贲门胃癌的发病风险(OR=2.405,95%CI:1.480~3.908);TEAD4 rs7135838与非贲门胃癌的发病风险无关联;TEAD1rs2304733、TEAD4 rs7135838以及rs1990330对非贲门胃癌发病风险存在交互作用(P<0.05)。结论在包头地区汉族人群中,TEAD1 rs2304733、TEAD4 rs1990330在Hp感染中不起主要作用,在非贲门胃癌发病风险中可能起一定作用;TEAD4 rs7135838在Hp感染以及非贲门胃癌发病风险中可能均不起主要作用;TEAD1 rs2304733、TEAD4 rs1990330对非贲门胃癌发病风险的协同效应最强,为最佳交互模型。 展开更多
关键词 TEA转录因子1 TEA转录因子4 基因多态性 幽门螺杆菌 非贲门胃癌
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肝特异性Rbp4基因敲除小鼠的建立及糖代谢特征分析
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作者 卢婉贤 马琦 +2 位作者 王黎 刘梦迪 郭宝平 《中国实验动物学报》 CAS CSCD 北大核心 2024年第4期493-502,共10页
目的 建立肝特异性Rbp4基因敲除小鼠模型,并初步探索肝特异性Rbp4基因缺失对糖代谢的影响。方法 利用Cre-LoxP技术,使用C57/BL6J小鼠和Alb-Cre小鼠构建肝特异性Rbp4基因敲除小鼠模型。利用PCR及琼脂糖凝胶电泳鉴定小鼠基因型。选取10只1... 目的 建立肝特异性Rbp4基因敲除小鼠模型,并初步探索肝特异性Rbp4基因缺失对糖代谢的影响。方法 利用Cre-LoxP技术,使用C57/BL6J小鼠和Alb-Cre小鼠构建肝特异性Rbp4基因敲除小鼠模型。利用PCR及琼脂糖凝胶电泳鉴定小鼠基因型。选取10只18周龄C57/BL6J雄性小鼠为野生对照组(WT),10只同周龄flox纯合且Alb-Cre阴性小鼠为实验对照组(Rbp4~(flox/flox):Cre~-),10只同周龄flox纯合且Alb-Cre阳性小鼠为实验组(Rbp4~(flox/flox):Cre~+)。分别利用Western Blot及qRT-PCR验证小鼠肝中RBP4蛋白及Rbp4 mRNA表达水平。利用qRT-PCR检测其他组织中Rbp4 mRNA表达水平。采用苏木素-伊红(HE)染色观察肝组织形态。利用血糖仪检测小鼠尾静脉血液标本血糖值,进行葡萄糖耐量及胰岛素耐量实验。利用qRT-PCR检测肝糖代谢基因磷酸烯醇丙酮酸羧化酶(Pepck)和葡萄糖-6-磷酸酶(G6pase)表达水平。结果 成功繁育并鉴定出肝特异性Rbp4基因敲除小鼠。Rbp4~(flox/flox):Cre~+组小鼠肝中RBP4蛋白表达显著减少(P<0.05),Rbp4 mRNA表达显著减少(P<0.05)。三组小鼠脂肪、肾、胰、脾、心脏和肌肉组织中Rbp4 mRNA的相对表达量差异无显著性(P>0.05)。HE染色、葡萄糖耐量及胰岛素耐量实验结果表明肝特异性Rbp4基因敲除对肝组织形态、葡萄糖耐量及胰岛素耐量无显著影响(P>0.05)。三组小鼠肝中Pepck mRNA表达差异具有显著性(P<0.05),两两比较显示,Rbp4~(flox/flox):Cre~+组小鼠肝中Pepck mRNA相对表达量较Rbp4~(flox/flox):Cre~-组小鼠降低(P<0.05)。三组小鼠肝中G6pase mRNA表达差异无显著性(P>0.05)。结论 成功构建了肝特异性Rbp4基因敲除小鼠模型,基因缺失可抑制小鼠肝Pepck mRNA表达,为进一步探索该基因在小鼠糖代谢中的作用提供依据。 展开更多
关键词 2型糖尿病 视黄醇结合蛋白4 基因敲除 糖代谢 胰岛素抵抗
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Novel mutation of SPG4 gene in a Chinese family with hereditary spastic paraplegia:A case report
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作者 Jie Wang Wei-Ting Bu +2 位作者 Mei-Jia Zhu Ji-You Tang Xiao-Min Liu 《World Journal of Clinical Cases》 SCIE 2023年第14期3288-3294,共7页
BACKGROUND Hereditary spastic paraplegia(HSP)is a group of neurogenetic diseases of the corticospinal tract,accompanied by distinct spasticity and weakness of the lower extremities.Mutations in the spastic paraplegia ... BACKGROUND Hereditary spastic paraplegia(HSP)is a group of neurogenetic diseases of the corticospinal tract,accompanied by distinct spasticity and weakness of the lower extremities.Mutations in the spastic paraplegia type 4(SPG4)gene,encoding the spastin protein,are the major cause of the disease.This study reported a Chinese family with HSP caused by a novel mutation of the SPG4 gene.CASE SUMMARY A 44-year-old male was admitted to our hospital for long-term right lower limb weakness,leg stiffness,and unstable walking.His symptoms gradually worsened,while no obvious muscle atrophy in the lower limbs was found.Neurological examinations revealed that the muscle strength of the lower limbs was normal,and knee reflex hyperreflexia and bilateral positive Babinski signs were detected.Members of his family also had the same symptoms.Using mutation analysis,a novel heterozygous duplication mutation,c.1053dupA,p.(Gln352Thrfs*15),was identified in the SPG4 gene in this family.CONCLUSION A Chinese family with HSP had a novel mutation of the SPG4 gene,which is autosomal dominant and inherited as pure HSP.The age of onset,sex distribution,and clinical manifestations of all existing living patients in this family were analyzed.The findings may extend the current knowledge on the existing mutations in the SPG4 gene. 展开更多
关键词 Hereditary spastic paraplegia SPG4 gene MUTATION genetic testing Autosomal dominant HSP Adenosine triphosphatases associated with diverse cellular activities Case report
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玉米丁布葡萄糖苷-4-羟基甲基化酶基因bx12的克隆及其原核表达
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作者 沙哈尼 郑龙君 +3 位作者 勾帅 朴世领 高崇 郑大浩 《延边大学农学学报》 2024年第2期9-16,共8页
为阐明丁布葡萄糖苷-4-羟基甲基化酶在玉米抗蚜和抗螨中的作用,该研究以4个对蚜虫和叶螨抗性不同的玉米自交系为材料,克隆编码丁布葡萄糖苷-4-羟基甲基化酶的基因bx12,并进行了原核表达。结果表明:除自交系Mo17-476M外,其余3个自交系B73... 为阐明丁布葡萄糖苷-4-羟基甲基化酶在玉米抗蚜和抗螨中的作用,该研究以4个对蚜虫和叶螨抗性不同的玉米自交系为材料,克隆编码丁布葡萄糖苷-4-羟基甲基化酶的基因bx12,并进行了原核表达。结果表明:除自交系Mo17-476M外,其余3个自交系B73、ZaC546和Mo17-476W的基因组中都分离到含有由744个碱基所构成的bx12基因开放阅读框的目标DNA片段,都编码由247个氨基酸组成的同一种蛋白BX12P;该蛋白与参考基因编码的蛋白氨基酸序列的一致性为100%。生物信息学分析表明,BX12P是一种多功能酶,属于依赖于S-腺苷-L-蛋氨酸(SAM)的邻-甲基转移酶结构域超级家族,具有蛋白质二聚化功能、植物甲基转移酶功能和邻-甲基转移酶功能;该酶具有专一性地将丁布葡萄糖苷转化为4-甲氧基丁布葡萄糖苷的功能。利用克隆的bx12基因所构建的原核表达载体,经测序和通读结构鉴定,在大肠杆菌BL21(DE3)细胞中成功表达出了目的蛋白。 展开更多
关键词 玉米 丁布葡萄糖苷-4-羟基甲基化酶 bx12基因 原核表达
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