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哈维弧菌rbsB基因的克隆与表达 被引量:1
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作者 贝蕾 苏友禄 +5 位作者 赵超 徐力文 刘广锋 王雨 郭志勋 冯娟 《南方水产科学》 CAS CSCD 北大核心 2018年第2期75-82,共8页
哈维弧菌(Vibrio harveyi)是海水鱼养殖中一种重要的病原菌。该研究根据已知rbs B(核糖体结合蛋白)基因序列设计引物,扩增得到哈维弧菌354(V.harveyi 354)rbs B基因的全序列(Gen Bank序列号MF797015),预测该序列可编码292个氨基酸,分子... 哈维弧菌(Vibrio harveyi)是海水鱼养殖中一种重要的病原菌。该研究根据已知rbs B(核糖体结合蛋白)基因序列设计引物,扩增得到哈维弧菌354(V.harveyi 354)rbs B基因的全序列(Gen Bank序列号MF797015),预测该序列可编码292个氨基酸,分子量为30.7 k D,理论等电点为5.05,亲水性系数为0.043,为疏水性蛋白。根据Rbs B氨基酸构建的系统进化树可以发现哈维弧菌Rbs B蛋白和欧文弧菌(V.owensii CAIM 1854)的关系最近。构建了p GEX-4t-1-rbs B重组质粒并转化至大肠埃希菌BL21(DE3)中,得到的重组蛋白的相对分子量约59 k D,在37℃、IPTG浓度为0.6 mmol·L–1诱导8 h时表达量最高。 展开更多
关键词 哈维弧菌 rbsb基因 全长克隆 原核表达
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罗非鱼源无乳链球菌(Streptococcus agalactiae)新型AI-2信号分子受体RbsB蛋白结晶生长研究 被引量:1
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作者 樊博琳 潘丽霞 +3 位作者 王忠良 黎源 简纪常 王蓓 《海洋与湖沼》 CAS CSCD 北大核心 2020年第1期132-140,共9页
为了开展无乳链球菌(Streptococcus agalactiae)核糖结合蛋白(Ribose binding protein B,RbsB)结构功能的研究,本实验根据已知无乳链球菌ZQ0910全基因组序列设计相关引物。采用PCR方法扩增其RbsB基因,随后将该基因定向克隆到原核表达载... 为了开展无乳链球菌(Streptococcus agalactiae)核糖结合蛋白(Ribose binding protein B,RbsB)结构功能的研究,本实验根据已知无乳链球菌ZQ0910全基因组序列设计相关引物。采用PCR方法扩增其RbsB基因,随后将该基因定向克隆到原核表达载体pGEX-6p-1中,在大肠杆菌BL21(DE3)感受态细胞中进行IPTG诱导表达;采用HRV 3C蛋白酶切除GST标签,分子筛分离获得RbsB蛋白;运用生物信息学软件对RbsB基因序列进行分析,并对RbsB蛋白二级和三级结构进行预测;采用NeXtal Tubes JCSG Core Suite结晶试剂盒筛选蛋白结晶条件。研究结果表明,该基因全长为969碱基,编码322个氨基酸,RbsB蛋白理论分子量33.9ku,等电点为9.41,二级结构中α螺旋结构所占比重最高,建立RbsB蛋白三维结构模式图;经IPTG诱导后表达的融合蛋白分子量为59ku,筛选RbsB蛋白的初始结晶条件为(0.2mol/L di-Potassium hydrogen phosphate,20%(W/V)PEG3350;1.5mol/L ammonium sulfate,25%(V/V)Glycerol),获得RbsB蛋白结晶体。本研究结果可为无乳链球菌核糖结合蛋白(RbsB)的功能解析提供实验及理论基础。 展开更多
关键词 无乳链球菌 rbsb蛋白 蛋白纯化 结晶化
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The Streptococcus agalactiae Ribose Binding Protein B (RbsB) Mediates Quorum Sensing Signal Uptake via Interaction with Autoinducer-2 Signals 被引量:1
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作者 FAN Bolin PAN Lixia +6 位作者 WANG Zhongliang WANGKAHART Eakapol HUANG Yuchong YANG Dengfeng JIAN Jichang HUANG Yu WANG Bei 《Journal of Ocean University of China》 SCIE CAS CSCD 2021年第5期1285-1295,共11页
Understanding aquatic pathogen in sediments or aquacultural water is crucial to protect public health from soilborne and waterborne diseases.Quorum sensing(QS)was increasingly reported in biological wastewater treatme... Understanding aquatic pathogen in sediments or aquacultural water is crucial to protect public health from soilborne and waterborne diseases.Quorum sensing(QS)was increasingly reported in biological wastewater treatment processes because of their inherent roles in biofilm development,bacterial aggregation and so on.The widely QS signals was Antoinducer-2(AI-2),primarily involved to allow the possibility of interspecies communication.However,the cellular components that mediate the response of Streptococcus agalactiae to AI-2 have not been fully characterized.Analysis of the complete genome sequence of S.agalactiae indi-cated that its RbsB protein has similarity to Escherichia coli LsrB and Aggregatibacter actinomycetemcomitans RbsB proteins that bind AI-2.We hypothesized that RbsB protein mediates quorum sensing signal uptake via interaction with AI-2.To evaluate the regulatory effect of RbsB on QS system,the recombinant plasmid pGEX-6p-1-RbsB was constructed and RbsB protein was purified with GST-tag.To further elucidate the role of RbsB protein binding to DPD(AI-2 precursor dihydroxypentanedione),the systemati-cally throughput circular dichroism(CD)spectroscopy,isothermal titration calorimetry200(ITC200)and molecular docking methods were employed.The high expression of soluble RbsB protein with molecular weight of 33 kDa was obtained.The thermodynamics results(ΔH<0,ΔS<0,ΔG<0)with ITC determination indicated that the binding process between DPD and RbsB was exothermic and spontaneous,with hydrogen bonds and van der Waals forces as the main binding forces.Obviously,DPD can be more easily combined with RbsB in a dose-dependent manner,suggesting that RbsB was changed in the microenvironment of DPD when the DPD concentration was between 0.8-1.0mmolL−1 and reaching the maximum binding amount.According to molecular docking,3 hydrophobic residues involved in DPD and RbsB protein stable binding were be found,and also hydrogen bonding plays a key role in the formation of the new complex.RbsB efficiently inhibited V.harveyi bioluminescence induced by both S.agalactiae AI-2 and V.harveyi AI-2 in a dose-dependent manner.However,our results suggest that RbsB may play a role in the response of S.agalactiace to AI-2. 展开更多
关键词 Streptococcus agalactiae rbsb protein circular dichroism(CD)spectroscopy isothermal titration calorimetry200(ITC200) molecular docking
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