期刊文献+
共找到66,513篇文章
< 1 2 250 >
每页显示 20 50 100
基于Real-time PCR法检测乳粉中牛源性成分定量研究
1
作者 陈晨 史国华 +5 位作者 陈勃旭 张瑞 王玉欣 贾文珅 陈佳 周巍 《粮油食品科技》 CAS CSCD 北大核心 2024年第2期159-164,共6页
基于Real-timePCR建立了乳粉中牛源性成分相对定量检测方法,并对牛的特异性引物与探针进行了特异性、灵敏度和稳定性测试。通过模拟不同浓度牛乳粉与马乳粉混合样本,根据其△Ct值的函数关系进行线性拟合进而绘制标准曲线,建立乳粉中牛... 基于Real-timePCR建立了乳粉中牛源性成分相对定量检测方法,并对牛的特异性引物与探针进行了特异性、灵敏度和稳定性测试。通过模拟不同浓度牛乳粉与马乳粉混合样本,根据其△Ct值的函数关系进行线性拟合进而绘制标准曲线,建立乳粉中牛源性成分的相对定量检测。结果显示,该方法的最低检测限为0.00001 mg/mL,回收率为91.11%~119.2%,组间变异系数≤0.58%、组内变异系数≤1.44%。说明该方法在特异性与稳定性上适用于乳粉中牛源性成分及含量的掺假检测。 展开更多
关键词 牛乳粉 马乳粉 real-time pcr 掺假检测
下载PDF
一种基于real-time PCR技术的TTV检测方法的建立及应用
2
作者 贾毅博 王高玉 +4 位作者 邓宛心 林彩云 杨华 陈运春 尹飞飞 《海南医学院学报》 CAS 北大核心 2024年第7期489-497,共9页
目的:本研究旨在开发一种具有更高灵敏度和特异性的TTV检测技术,为揭示TTV在多种疾病过程中的作用提供重要的技术支持。方法:为了更精确、灵敏的检测TTV,本研究分析了目前公布的所有亚型的TTV基因序列,在此基础上建立了一种基于UTR区域... 目的:本研究旨在开发一种具有更高灵敏度和特异性的TTV检测技术,为揭示TTV在多种疾病过程中的作用提供重要的技术支持。方法:为了更精确、灵敏的检测TTV,本研究分析了目前公布的所有亚型的TTV基因序列,在此基础上建立了一种基于UTR区域的real-time PCR检测方法,并与文献报道应用较为广泛的PCR检测方法进行了对比。结果:本研究建立的方法在1×10^(7)~1×10^(1) copies/μL标准品浓度范围内具有良好的线性关系,相关系数为1.000,斜率为-3.446,检测下限为1×10^(1) copies/μL。重复性试验结果显示,组内变异系数为7.22%,表明本方法重复性、稳定性较强。针对30份临床样本,使用本研究建立的real-time PCR检测方法及目前被多个研究所使用的4套引物进行对比。结果表明,本研究所建立的方法灵敏度显著高于文献中报道的4种方法(P<0.01);Sanger测序结果表明,本方法检测出的30份阳性样本均为TTV,检测特异性为100%。结论:本研究采用基于TaqMan探针的real-time PCR检测方法,检测灵敏性高、覆盖基因型范围广,尤其对于TTV病毒载量较低的情况下能够进行定量检测,对于TTV病毒的致病性及作为免疫标志物的应用提供重要的技术支持。 展开更多
关键词 Torque teno virus 基因组扩增测序 real-time pcr检测
下载PDF
Prevalence and Antibiotic Resistance of Urinary Tract Pathogens, with Molecular Identification of Klebsiella pneumoniae, Klebsiella oxytoca, and Acinetobacter spp., Using Multiplex Real-Time PCR
3
作者 Hawa Tarnagda Djénéba Ouermi +12 位作者 Tani Sagna Wendyam Marie Christelle Nadembega Abdoul Karim Ouattara Lassina Traoré Rogomenoma Alice Ouedraogo Prosper Bado Bapio Valérie Elvira Jean Télesphore Bazie Nicole Bouda/Zongo Luc Zongo Albert Théophane Yonli Théodora Mahoukèdè Zohoncon Florencia Wendkuuni Djigma Jacques Simpore 《American Journal of Molecular Biology》 CAS 2024年第4期245-260,共16页
Urinary tract infections (UTIs) caused by uropathogens are a significant public health problem, and their treatment primarily relies on antibiotic therapy. However, the increasing global development of antibiotic resi... Urinary tract infections (UTIs) caused by uropathogens are a significant public health problem, and their treatment primarily relies on antibiotic therapy. However, the increasing global development of antibiotic resistance necessitates updating diagnostic techniques to ensure higher sensitivity and specificity, especially with advancements in science and medicine. This study aimed to evaluate the prevalence of UTIs and antibiotic resistance profiles through urine culture, as well as to identify Klebsiella pneumoniae, Klebsiella oxytoca, and Acinetobacter spp. in urine samples using a molecular approach with multiplex real-time PCR. From May 3 to July 25, 2023, at the Pietro Annigoni Biomolecular Research Center (CERBA) and Saint Camille Hospital of Ouagadougou (HOSCO), 209 urine samples collected from patients with suspected UTIs were analyzed using both urine culture and multiplex real-time PCR. Among the 209 patients, 52.15% were male and 47.85% female, with an average age of 46.87 ± 21.33 years. Urine cultures revealed an overall UTI prevalence of 23.44%, with a prevalence of 8.13% in men versus 15.31% in women (P = 0.023). The bacterial prevalence rates were as follows: Escherichia coli (12.92%), Klebsiella spp. (7.18%), Enterobacter cloacae (1.44%), Staphylococcus aureus (0.96%), and other bacteria. Klebsiella spp. demonstrated 100% resistance to Amoxicillin and Amoxicillin/Clavulanic Acid, while Escherichia coli showed 96.2% and 65.4% resistance to Amoxicillin and Amoxicillin/Clavulanic Acid, respectively. PCR analysis of the target bacteria revealed mono-infection prevalence rates of Klebsiella pneumoniae (10.39%), Klebsiella oxytoca (7.79%), and Acinetobacter spp. (7.79%), along with a co-infection prevalence rate of Klebsiella pneumoniae/Acinetobacter spp. (1.30%). This study demonstrated that PCR, with its high sensitivity and specificity, could effectively distinguish Klebsiella pneumoniae from Klebsiella oxytoca and detect Acinetobacter spp. in less than 24 hours—something urine culture alone could not achieve. The relative ease of automating urine PCR testing, combined with its diagnostic accuracy and rapid turnaround time, makes it a valuable addition to modern medical practice for the laboratory diagnosis of UTIs. 展开更多
关键词 Urinary Tract Infections Klebsiella pneumoniae Klebsiella oxytoca Acinetobacter spp. Urine Culture real-time pcr
下载PDF
24重荧光real-time PCR技术在食物中毒快速检测中的应用
4
作者 卢媛 钟颖涛 《食品安全导刊》 2024年第6期85-88,共4页
目的:应用24重荧光real-time PCR检测技术快速筛检食物中毒病原菌,结合国家标准中的培养法探讨24重荧光real-time PCR检测技术符合性和应用价值。方法:采用高灵敏度、高特异性的24重荧光real-time PCR检测技术作为中毒病原菌的初筛方法... 目的:应用24重荧光real-time PCR检测技术快速筛检食物中毒病原菌,结合国家标准中的培养法探讨24重荧光real-time PCR检测技术符合性和应用价值。方法:采用高灵敏度、高特异性的24重荧光real-time PCR检测技术作为中毒病原菌的初筛方法,国标方法进行细菌分离培养,并对分离出的病原菌进行生化鉴定。结果:5份食物中毒患者肛拭子在增菌前检出4份霍乱弧菌核酸(非O1/非O139群,24重荧光real-time PCR),9份患者肛拭子在增菌后检出5株霍乱弧菌(非O1/非O139群,国标培养法),其中包含4份PCR技术初筛阳性样品,两个方法的符合率为80%。所有样本均未检出沙门氏菌、志贺菌、副溶血性弧菌、致泻性大肠埃希菌以及金黄色葡萄球菌。结论:应用24重荧光real-time PCR检测技术同时检测24种常见致病病原菌,能高效锁定中毒病原菌。将其与国标培养法相结合,对临床治疗和食物中毒快速处置能起到积极作用,值得应用和推广。 展开更多
关键词 24重荧光real-time pcr技术 培养法 食物中毒
下载PDF
基于病菌孢子捕捉和real-time PCR技术的田间空气中小麦白粉病菌孢子动态监测及病情估计模型研究
5
作者 王奥霖 商昭月 +8 位作者 张美惠 王贵 胡小平 徐飞 孙振宇 曹世勤 刘伟 范洁茹 周益林 《植物保护》 CAS CSCD 北大核心 2024年第2期49-56,72,共9页
利用Burkard定容式孢子捕捉器结合real-time PCR定量技术,分别对种植高抗、中感和高感白粉病小麦品种的田间空气中白粉病菌分生孢子浓度进行监测,结果表明,real-time PCR定量与传统的显微观察计数两种方法测得的孢子浓度呈显著正相关(P... 利用Burkard定容式孢子捕捉器结合real-time PCR定量技术,分别对种植高抗、中感和高感白粉病小麦品种的田间空气中白粉病菌分生孢子浓度进行监测,结果表明,real-time PCR定量与传统的显微观察计数两种方法测得的孢子浓度呈显著正相关(P≤0.01),且两种病菌孢子计数方法在同一抗性品种上监测到的孢子浓度动态相近。此外,两种方法测得的孢子浓度与各气象因子的相关性分析结果一致,空气中的白粉病菌孢子浓度主要与空气相对湿度显著正相关。在此基础上,利用两种方法测定的田间空气中白粉病菌孢子浓度分别建立了基于累积孢子浓度的田间病情估计模型。分析发现,基于两种孢子浓度测定方法建立的病情估计模型间无显著性差异,表明real-time PCR定量技术测定的孢子浓度在构建白粉病病情估计模型上具有一定可行性。该结果为real-time PCR定量技术与病菌孢子捕捉技术相结合用于小麦白粉病的监测和预测提供理论依据。 展开更多
关键词 小麦白粉病 病菌孢子捕捉 实时荧光定量pcr 病原菌监测 病情估计模型
下载PDF
肉中猪源性成分Real-time PCR定量检测技术 被引量:3
6
作者 翟晓虎 李翎旭 +3 位作者 陈小竹 蒋怀德 贺卫华 姚大伟 《中国农业科学》 CAS CSCD 北大核心 2023年第1期156-164,共9页
【目的】建立一种快速、准确的肉中猪源性成分定量检测方法。【方法】首先从GenBank数据库中筛选猪特异性的微卫星DNA,根据微卫星DNA核酸序列设计引物,对常见10种动物基因组DNA进行PCR扩增,通过有无扩增产物判断筛选的微卫星DNA对猪源... 【目的】建立一种快速、准确的肉中猪源性成分定量检测方法。【方法】首先从GenBank数据库中筛选猪特异性的微卫星DNA,根据微卫星DNA核酸序列设计引物,对常见10种动物基因组DNA进行PCR扩增,通过有无扩增产物判断筛选的微卫星DNA对猪源性成分的特异性。然后根据微卫星DNA核酸序列,设计特异性引物和探针,建立猪源性成分Real-time PCR检测方法,采用双标准曲线分别对猪源性成分和总动物源性成分进行定量,计算猪源性成分的百分含量。【结果】筛选到猪特异性微卫星DNA(Accession EF172428),根据其序列设计的引物SEQ-sus2-F/R只能从猪基因组DNA中扩增出目的条带,其他动物的基因组均无目的条带扩增。建立的Real-time PCR检测方法灵敏度为0.02 ng/25μL反应体系。该方法能够准确检测出混合DNA样品中猪源性成分和混合肉样品中猪源性成分,百分误差分别约为1.32%和1.06%-7.12%。【结论】本研究利用Real-time PCR技术建立的定量猪源性成分的检测方法可以用来检测猪源性成分在混合样品中的百分含量。 展开更多
关键词 动物源性成分 real-time pcr 定量
下载PDF
Establishment and Comparison of Two Taq Man Real-time PCR Methods for PCV2 被引量:2
7
作者 周忠涛 王小敏 +4 位作者 汪伟 茅爱华 温立斌 倪艳秀 何孔旺 《Agricultural Science & Technology》 CAS 2015年第1期3-8,共6页
[Objective] In this study, the quantitive detection of PCV2 (porcine circovirus type 2) in vitro was achieved. We aimed to establish two kinds of TaqMan real-time PCR methods based on PCV20RF1 and ORF2 respectively ... [Objective] In this study, the quantitive detection of PCV2 (porcine circovirus type 2) in vitro was achieved. We aimed to establish two kinds of TaqMan real-time PCR methods based on PCV20RF1 and ORF2 respectively and compare them. [Method] According to the relatively'conserved sequences of PCV20RF1 and ORF2 registered in GenBank, two pairs of specific primers and TaqMan probes were designed and synthesized. Then the recombinant plasmids containing the whole sequences of PCV20RF1 and ORF2 were constructed to draw the standard curves through optimizing the reaction system and conditions. And thus two kinds of TaqMan real-time PCR detection methods based on the whole sequences of ORF1 and ORF2 respectively were constructed for PCV2. [Result] For the two established standard curves, the Ct values showed a good linear relationship with the loga- rithms of copy numbers of templates (F2〉0.99). The amplification efficiency ranged from 90% to 110%. The amplifications all had a good repeatability with variation coefficients within groups all less than 5%. Moreover, the amplifications all had a good specificity. When the sequences of porcine parvovirus (PPV), porcine circovirus type 1 (PCV1), swine pseudorabies virus (PRV), porcine reproductive and respiratory syndrome virus (PRRSV) were used as templates, the target sequence was not amplified. The amplifications also had a high sensitivity. The ORF1 detection method could reach 1.0x10T copies/;ul, and the ORF2 detection method could reach 1.0×10^2 copies/μl. The two established real-time PCR detection methods were used to detect the 80 clinical samples respectively. The results showed the magnitudes of 72 amplified samples were basically consistent between the 2 detection methods, while the magnitudes of the other 8 amplified samples were inconsistent. Then the 8 samples were detected with SYBR Green I real-time PCR method established based on the sequence of PCV2-1ike factor P1 by Wen et aL The PCV2-1ike factor P1 was amplified in all the 8 samples, indicating the 8 samples were all infected with PCV2-1ike factor P1. [Conclusion] The ORFl-based detection method has a higher accuracy, and it can be used for the rapid detection of PCV2. 展开更多
关键词 PCV2 TaaMan real-time pcr ORF1 ORF2 PCV2-1ike factor P1
下载PDF
粪便标本溶组织内阿米巴原虫Real-Time PCR检测方法的建立及初步评价 被引量:4
8
作者 张春莹 庞华胜 +3 位作者 匡紫微 孟妍明 刘成桂 马莹 《寄生虫与医学昆虫学报》 CAS 2021年第1期29-34,60,共7页
为建立粪便标本溶组织内阿米巴原虫Real-Time PCR检测方法,并评价该方法在临床粪便标本检测中的应用价值,本文基于溶组织内阿米巴原虫小亚基核糖体RNA(SSU rRNA)基因序列设计了特异性引物并使用Real-Time PCR方法对溶组织内阿米巴原虫... 为建立粪便标本溶组织内阿米巴原虫Real-Time PCR检测方法,并评价该方法在临床粪便标本检测中的应用价值,本文基于溶组织内阿米巴原虫小亚基核糖体RNA(SSU rRNA)基因序列设计了特异性引物并使用Real-Time PCR方法对溶组织内阿米巴原虫标准株DNA进行扩增,以建立溶组织内阿米巴原虫感染的Real-Time PCR技术。同时收集临床腹泻病人粪便标本221例并分别采用镜检法、Real-Time PCR法和ELISA原虫抗原检测法进行监测,以临床诊断结果为标准,分析3种方法的特异性、敏感性等检测性能。结果表明,本文建立的Real-Time PCR溶组织内阿米巴原虫检测方法特异性好,最低检测限为0.5 fg/μL,可用于临床腹泻患者粪便标本溶组织内阿米巴原虫检测。相对而言,Real-Time PCR方法特异性和敏感性均优于镜检法和ELISA原虫抗原检测法。 展开更多
关键词 溶组织内阿米巴原虫 real-time pcr 镜检法 ELISA SSU rRNA
下载PDF
Development of TaqMan-based Real-time PCR Assay for Detecting Transmissible Gastroenteritis Virus and Its Application in Vaccine Evaluation 被引量:2
9
作者 俞正玉 徐向伟 +8 位作者 孙冰 何孔旺 郭容利 杜露平 温立斌 张雪寒 茅爱华 倪艳秀 李彬 《Agricultural Science & Technology》 CAS 2014年第9期1487-1490,共4页
[Objective] This study aimed to establish a TaqMan-based real-time PCR assay for detecting transmissible gastroenteritis virus (TGEV). [Method] Primers and a probe were designed according to the conserved sequence o... [Objective] This study aimed to establish a TaqMan-based real-time PCR assay for detecting transmissible gastroenteritis virus (TGEV). [Method] Primers and a probe were designed according to the conserved sequence of N gene in TGEV genome. After gradient dilution, the recombinant plasmid harboring the N gene was used as a standard for real-time PCR assay to establish the standard curve. [Re- sult] The results showed that the established real-time PCR assay exhibited a good linear relationship within the range of 102-10^10 copies/ul; the correlation coefficient was above 0.99 and the amplification efficiency ranged from 90% to 110%. The de- tection limit of real-time PCR assay for TGEV was 10 copies/μl, suggesting a high sensitivity; there was no cross reaction with other porcine viruses, indicating a good specificity; coefficients of variation within and among batches were lower than 3%, suggesting a good repeatability. The established real-time PCR method could be ap- plied in quantitative analysis and evaluation of the immune efficacy of TGEV vac- cines and detection of TGEV in clinical samples. [Conclusion] The TaqMan-based real-time PCR assay established in this study is highly sensitive and specific, which can provide technical means for the epidemiological survey of TGEV, development of TGEV vaccines and investigation of the pathogenesis of TGE. 展开更多
关键词 Transmissible gastroenteritis virus (TGEV) TaqMan-based real-time pcr Detection
下载PDF
Real-Time PCR Technique and Its Application in Quantification of Plant Nucleic Acid Molecules 被引量:8
10
作者 刘进元 《Acta Botanica Sinica》 CSCD 2003年第6期631-637,共7页
Real-time PCR is a closed DNA amplification system that skillfully integrates biochemical, photoelectric and computer techniques. Fluorescence data acquired once per cycle provides rapid absolute quantification of ini... Real-time PCR is a closed DNA amplification system that skillfully integrates biochemical, photoelectric and computer techniques. Fluorescence data acquired once per cycle provides rapid absolute quantification of initial template copy numbers as PCR products are generated. This technique significantly simplifies and accelerates the process of producing reproducible quantification of nucleic acid molecules. It not only is a sensitive, accurate and rapid quantitative method, but it also provides an easier way to calculate the absolute starting copy number of nucleic acid molecules to be tested. Together with molecular bio-techniques, like microarray, real-time PCR will play a very important role in many aspects of molecular life science such as functional gene analysis and disease molecular diagnostics. This review introduces the detailed principles and application of the real-time PCR technique, describes a recently developed system for exact quantification of AUX/IAA genes In Arabidopsis, and discusses the problems with the real-time PCR process. 展开更多
关键词 real-time pcr technique quantification of plant nucleic acid molecules gene expression molecular medicine
下载PDF
Identifying the stability of housekeeping genes to be used for the quantitative real-time PCR normalization in retinal tissue of streptozotocin-induced diabetic rats
11
作者 Muhammad Zulfiqah Sadikan Nurul Alimah Abdul Nasir +2 位作者 Mohammad Johari Ibahim Igor Iezhitsa Renu Agarwal 《International Journal of Ophthalmology(English edition)》 SCIE CAS 2024年第5期794-805,共12页
AIM:To investigate the stability of the seven housekeeping genes:beta-actin(ActB),glyceraldehyde-3-phosphate dehydrogenase(GAPDH),18s ribosomal unit 5(18s),cyclophilin A(CycA),hypoxanthine-guanine phosphoribosyl trans... AIM:To investigate the stability of the seven housekeeping genes:beta-actin(ActB),glyceraldehyde-3-phosphate dehydrogenase(GAPDH),18s ribosomal unit 5(18s),cyclophilin A(CycA),hypoxanthine-guanine phosphoribosyl transferase(HPRT),ribosomal protein large P0(36B4)and terminal uridylyl transferase 1(U6)in the diabetic retinal tissue of rat model.METHODS:The expression of these seven genes in rat retinal tissues was determined using real-time quantitative reverse transcription polymerase chain reaction(RT-qPCR)in two groups;normal control rats and streptozotocininduced diabetic rats.The stability analysis of gene expression was investigated using geNorm,NormFinder,BestKeeper,and comparative delta-Ct(ΔCt)algorithms.RESULTS:The 36B4 gene was stably expressed in the retinal tissues of normal control animals;however,it was less stable in diabetic retinas.The 18s gene was expressed consistently in both normal control and diabetic rats’retinal tissue.That this gene was the best reference for data normalisation in RT-qPCR studies that used the retinal tissue of streptozotocin-induced diabetic rats.Furthermore,there was no ideal gene stably expressed for use in all experimental settings.CONCLUSION:Identifying relevant genes is a need for achieving RT-qPCR validity and reliability and must be appropriately achieved based on a specific experimental setting. 展开更多
关键词 housekeeping genes stability real-time reverse transcription polymerase chain reaction retinal tissue streptozotocin-induced diabetic rats
下载PDF
Establishment and Application of a Real-time PCR Method for Detecting stx2 Gene in Shiga Toxin-producing Escherichia coli(STEC)
12
作者 汪伟 张雪寒 +6 位作者 王润 何孔旺 温立斌 倪艳秀 周俊明 王小敏 李彬 《Agricultural Science & Technology》 CAS 2014年第9期1473-1477,共5页
[Objective] This study aimed to establish a real-time PCR method for de- tecting stx2 gene in Shiga toxin-producing E. coli (STEC). [Method] According to the known STEC stx2 gene sequences published in GenBank, PCR ... [Objective] This study aimed to establish a real-time PCR method for de- tecting stx2 gene in Shiga toxin-producing E. coli (STEC). [Method] According to the known STEC stx2 gene sequences published in GenBank, PCR primers and probes were designed based on the conserved region to construct recombinant plasmid as a positive template, thus optimizing the reaction conditions and establishing the real- time PCR method. [Result] A standard curve was established based on the opti- mized real-time PCR system, indicting a good linear correlation between the initial template concentration and Ct value, with the correlation coefficient F^e of above 0.995. The established method had a good specificity, without non-specific amplifica- tion for 10 non-STEC intestinal bacterial strains; the detection limit of initial template was 1.0x102 copies/μI, indicating a high sensitivity; furthermore, the coefficients of variation within and among batches were lower than 1% and 5% respectively, sug- gesting a good repeatability. [Conclusion] In this study, a real-time PCR method was successfully established for detecting STEC stx2 gene, which provided technical means for rapid detection of STEC in samples. 展开更多
关键词 Shiga toxin-producing E. colr Shiga toxin 2 gene real-time pcr
下载PDF
病原真菌real-time PCR检测对非中性粒细胞缺乏的老年患者肺部真菌病的诊断价值 被引量:3
13
作者 蒙星烨 刘晓 +6 位作者 万喆 陈伟 阙呈立 林连君 余进 宋营改 李若瑜 《中国真菌学杂志》 CSCD 2022年第6期454-460,共7页
目的 评估本实验室设计的肺部常见病原真菌real-time PCR检测支气管肺泡灌洗液(bronchoalveolar lavage fluid,BALF)标本对非中性粒细胞缺乏的老年人群肺部真菌病的诊断价值。方法 回顾性纳入2020年至2021年间于北京大学第一医院就诊的... 目的 评估本实验室设计的肺部常见病原真菌real-time PCR检测支气管肺泡灌洗液(bronchoalveolar lavage fluid,BALF)标本对非中性粒细胞缺乏的老年人群肺部真菌病的诊断价值。方法 回顾性纳入2020年至2021年间于北京大学第一医院就诊的怀疑肺部感染的294名非中性粒细胞缺乏老年患者,采用real-time PCR检测其BALF标本中的病原真菌;根据宿主因素、临床表现和真菌学检查进行诊断分类,27名患者符合确诊或临床诊断的肺部侵袭真菌病,其中7例(25.6%)为多种真菌合并感染,6名患者诊断慢性肺曲霉病。结果 曲霉PCR Ct值受试者工作特征曲线下面积为0.936(95%置信区间0.865~1.000),最佳cut-off值为34.8,对肺曲霉病的诊断灵敏度和特异度分别为95.7%和92.1%。耶氏肺孢子菌PCR以Ct值37.1为cut-off值,诊断耶氏肺孢子菌肺炎灵敏度和特异度分别为94.7%和99.7%。隐球菌和毛霉PCR以Ct值35.0为cut-off值,在肺隐球菌病和肺毛霉病中阳性率分别为50%(2/4)和100%(1/1)。病原真菌real-time PCR确定cut-off值后,以PCR检出的真菌与肺部真菌病的致病真菌一致作为阳性,灵敏度、特异度、阳性预测值和阴性预测值分别为86.5%(32/37)、91.0%(253/278)、56.1%(32/57)和98.1%(253/258),总符合率为90.5%(285/315)。结论本研究团队开发的病原真菌real-time PCR体系覆盖常见肺部致病真菌,初步探索了其在BALF标本中的cut-off值,证实该方法在非中性粒细胞缺乏老年患者的肺部真菌病中具有良好的诊断价值。 展开更多
关键词 肺部真菌病 real-time pcr 支气管肺泡灌洗液 分子诊断
下载PDF
多主棒孢SdhB-H278Y突变位点real-time PCR检测体系的建立与应用 被引量:2
14
作者 朱广雪 阎昱韬 +7 位作者 孙炳学 周荣佳 岳圆圆 谢学文 柴阿丽 李磊 李宝聚 石延霞 《中国蔬菜》 北大核心 2023年第1期60-67,共8页
根据GenBank已登录序列中黄瓜多主棒孢琥珀酸脱氢酶B亚基(SdhB)基因序列差异,针对SdhB-H278Y突变设计特异性引物,建立SdhB-H278Y突变实时荧光定量PCR(real-time PCR)检测体系。结果表明:供试多主棒孢携带SdhBH278Y、SdhB-I280V突变;SdhB... 根据GenBank已登录序列中黄瓜多主棒孢琥珀酸脱氢酶B亚基(SdhB)基因序列差异,针对SdhB-H278Y突变设计特异性引物,建立SdhB-H278Y突变实时荧光定量PCR(real-time PCR)检测体系。结果表明:供试多主棒孢携带SdhBH278Y、SdhB-I280V突变;SdhB-H278Y突变株对啶酰菌胺抗性较强,EC50值为21.47μg·mL^(-1)或>30μg·mL^(-1);建立的real-time PCR检测体系具有良好的线性关系,相关系数R2=0.9929,可特异性检测SdhB-H278Y突变,灵敏度为3.6×10^(-4) ng·μL^(-1),为AS-PCR的10倍。利用携带SdhB-H278Y突变不同比例的基因组DNA对检测体系进行验证,预期值与检测值具有很高的相关性,R^(2)=0.9997;利用该检测体系对山东地区黄瓜棒孢叶斑病病斑中多主棒孢SdhB-H278Y突变株所占比例进行检测,检测结果为0.12%~2.69%。综上,本试验建立的real-time PCR检测体系高效、灵敏、定量,可用于多主棒孢SdhB-H278Y突变的检测,为黄瓜棒孢叶斑病抗性治理提供技术支持。 展开更多
关键词 黄瓜 多主棒孢 real-time pcr 抗药性 啶酰菌胺
下载PDF
寨卡病毒SYBR GreenⅠreal-time PCR方法的建立及应用 被引量:3
15
作者 于宁 刘宇梦 +5 位作者 李成辉 李卓昕 汪伟 孙文超 鲁会军 金宁一 《中国动物传染病学报》 CAS 北大核心 2021年第1期31-35,共5页
为建立一种针对寨卡病毒的快速诊断方法,本研究根据寨卡病毒的3’端保守基因序列,设计合成1对引物,建立了检测寨卡病毒的荧光定量PCR方法。结果显示:所建立的检测方法的Ct值与标准品在1.41×10^1~1.41×10^10^ copies/μL具有... 为建立一种针对寨卡病毒的快速诊断方法,本研究根据寨卡病毒的3’端保守基因序列,设计合成1对引物,建立了检测寨卡病毒的荧光定量PCR方法。结果显示:所建立的检测方法的Ct值与标准品在1.41×10^1~1.41×10^10^ copies/μL具有良好的线性关系,相关性为1,斜率为-3.502;灵敏性结果显示,该方法的检测限度为1.41×10^1 copies/μL,是普通PCR的10000倍;特异性结果显示,对CHIKV、DENV和JEV无特异性扩增,特异性强;重复性试验结果显示,组内和组间变异系数均小于1%,重复性好。本研究建立的SYBR Green I real-time PCR检测方法,可用于寨卡病毒感染的快速诊断。 展开更多
关键词 寨卡病毒 SYBR GreenⅠreal-time pcr 应用方法
下载PDF
应用real-time PCR定量检测果园葡萄霜霉病菌潜伏侵染 被引量:3
16
作者 杜娟 李金 +3 位作者 张涛 张游 姚珮 顾沛雯 《江苏农业学报》 CSCD 北大核心 2021年第4期861-866,共6页
为明确葡萄霜霉病菌潜伏侵染阶段的菌量与病害发生的关系,本研究对贺兰山东麓宁夏立兰酒庄酿酒葡萄园3个试验样地进行采样调查,分析3个样地检测的分子病情指数(MDI)与果园田间调查的病情指数(DI)的相关性。结果表明,宁夏立兰酒庄酿酒葡... 为明确葡萄霜霉病菌潜伏侵染阶段的菌量与病害发生的关系,本研究对贺兰山东麓宁夏立兰酒庄酿酒葡萄园3个试验样地进行采样调查,分析3个样地检测的分子病情指数(MDI)与果园田间调查的病情指数(DI)的相关性。结果表明,宁夏立兰酒庄酿酒葡萄园3个样地的MDI和DI呈极显著相关,3个样地的MDI均与采样后15 d的DI拟合性最高;当MDI值为0.0035~0.1841时,采样后12 d葡萄霜霉病在果园零星发生。MDI大于0.0035时,可作为当地酿酒葡萄霜霉病防治预警指标。 展开更多
关键词 葡萄霜霉菌 real-time pcr 分子病情指数 田间病情指数
下载PDF
鲤疱疹病毒Ⅱ型TaqMan real-time PCR检测方法的建立及应用 被引量:18
17
作者 周勇 曾令兵 +2 位作者 张辉 范玉顶 徐进 《水产学报》 CAS CSCD 北大核心 2013年第4期607-613,共7页
针对鲤疱疹病毒Ⅱ型(Cyprinid herpesvirus 2,CyHV-2)DNA解旋酶基因编码区序列设计特异性引物,利用PCR技术扩增出长度为1 446 bp的基因编码区片段,克隆到pMD19T载体上,构建重组质粒。经PCR鉴定与测序分析确认正确后,以10倍梯度稀释重组... 针对鲤疱疹病毒Ⅱ型(Cyprinid herpesvirus 2,CyHV-2)DNA解旋酶基因编码区序列设计特异性引物,利用PCR技术扩增出长度为1 446 bp的基因编码区片段,克隆到pMD19T载体上,构建重组质粒。经PCR鉴定与测序分析确认正确后,以10倍梯度稀释重组质粒,作为标准模板进行TaqMan real-time PCR扩增,制作标准曲线,建立了鲤疱疹病毒Ⅱ型的荧光定量PCR检测方法。检测结果显示,标准曲线的相关系数(R2)达到0.999 1,斜率为-3.412;对初始模板定量检测的范围为1×101~1×107copies/μL;特异性试验结果表明,该方法可特异性地检测出鲤疱疹病毒Ⅱ型,而对大鲵虹彩病毒(GSIV)、锦鲤疱疹病毒(KHV)以及空白对照无检测信号。取江苏射阳和宝应两地疑似患病鲫组织核酸作为模板进行荧光定量PCR,结果表明反应体系中的病毒量分别为6.89×104copies/μL和3.02×102copies/μL。本研究建立的鲤疱疹病毒Ⅱ型TaqMan实时荧光定量PCR方法灵敏度高、特异性强,对因鲤疱疹病毒Ⅱ感染引起的养殖鲫造血器官坏死症的诊断与病毒病原定量检测有重要意义。 展开更多
关键词 造血器官坏死症 鲤疱疹病毒Ⅱ型 TAQMAN real-time pcr 检测方法
下载PDF
鸡Ⅱ型星状病毒绝对定量real-time PCR的建立及应用 被引量:1
18
作者 赵伟 武宗仪 +1 位作者 秦爱建 钱琨 《中国家禽》 北大核心 2020年第12期30-35,共6页
研究旨在建立一种检测鸡Ⅱ型星状病毒(CAstV)绝对定量的检测方法。采用PCR方法扩增Ⅱ型CAstV保守区域基因RdRp部分基因,将其克隆至pGEM-T载体作为阳性标准质粒,并根据获得的RdRp基因设计合成一对133 bp引物,成功建立了Ⅱ型CAstV的绝对定... 研究旨在建立一种检测鸡Ⅱ型星状病毒(CAstV)绝对定量的检测方法。采用PCR方法扩增Ⅱ型CAstV保守区域基因RdRp部分基因,将其克隆至pGEM-T载体作为阳性标准质粒,并根据获得的RdRp基因设计合成一对133 bp引物,成功建立了Ⅱ型CAstV的绝对定量real-time PCR的检测方法。结果显示:研究构建的检测方法线性关系良好,检测灵敏度为10copies/μL,且对常见的禽源病毒均无非特异性扩增,特异性好。应用建立的绝对定量real-time PCR检测了病毒感染1日龄雏鸡不同组织样品,掌握了鸡Ⅱ型星状病毒在鸡体内不同组织内的分布及增殖情况。试验成功建立了Ⅱ型CAstV绝对定量real-time PCR检测方法,该方法特异性强、灵敏度高、重复性好,为进一步深入研究Ⅱ型CAstV的生物学特性提供了检测手段。 展开更多
关键词 鸡Ⅱ型星状病毒 RdRp基因 绝对定量 real-time pcr
下载PDF
PCR及Real-time PCR评价细菌DNA提取方法 被引量:40
19
作者 胡晓红 彭惠民 +2 位作者 刘昕 黄正根 袁科 《重庆医科大学学报》 CAS CSCD 2008年第2期155-158,共4页
目的:比较几种不同的细菌DNA提取方法,建立一种适于PCR和Real-time PCR的细菌DNA提取方法。方法:分别用蛋白酶K法、碱裂解法、Chelex-100+NP40、Chelex-100+TritonX-100法和水煮法提取同种浓度大肠杆菌DNA,测定OD260/280;用不同方法提... 目的:比较几种不同的细菌DNA提取方法,建立一种适于PCR和Real-time PCR的细菌DNA提取方法。方法:分别用蛋白酶K法、碱裂解法、Chelex-100+NP40、Chelex-100+TritonX-100法和水煮法提取同种浓度大肠杆菌DNA,测定OD260/280;用不同方法提取不同浓度的大肠杆菌DNA,进行PCR和实时荧光定量PCR扩增,比较灵敏度。结果:5种方法提取细菌DNA,其中Chelex-100+NP40法纯度(OD260/280=1.79±0.03)最高,此方法所提取的DNA产物进行PCR及Real-time PCR扩增未见假阳性及假阴性,其灵敏度为10个/ml细菌浓度。结论:Chelex-100+NP40的细菌DNA提取方法纯度及灵敏度高,且适应于PCR及Real-time PCR。 展开更多
关键词 DNA提取 pcr 实时荧光定量pcr
下载PDF
运用Real-time PCR方法研究日粮添加豆油与胡麻油对肉牛瘤胃纤维分解菌数量的影响 被引量:13
20
作者 李旦 王加启 +3 位作者 卜登攀 杨舒黎 魏宏阳 周凌云 《动物营养学报》 CAS CSCD 北大核心 2008年第3期256-260,共5页
本研究分别以产琥珀酸丝状杆菌(Fibrobacter succinogenes)、黄色瘤胃球菌(Ruminococcus flavefaciens)、白色瘤胃球菌(Ruminobacter albus)和溶纤维丁酸弧菌(Butyrivibrio fibrisolvens)16S rDNA序列设计引物,运用Real-ti me PCR技术... 本研究分别以产琥珀酸丝状杆菌(Fibrobacter succinogenes)、黄色瘤胃球菌(Ruminococcus flavefaciens)、白色瘤胃球菌(Ruminobacter albus)和溶纤维丁酸弧菌(Butyrivibrio fibrisolvens)16S rDNA序列设计引物,运用Real-ti me PCR技术研究日粮中添加豆油与胡麻油对肉牛上述4种瘤胃纤维分解菌数量的影响。结果表明,与对照组(CK)相比,添加豆油组(LOC1)和胡麻油(LOC2)组,产琥珀酸丝状杆菌(Fibrobacter succinogenes)、黄色瘤胃球菌(Ruminococcus flavefaciens)、白色瘤胃球菌(Ruminobacter albus)和溶纤维丁酸弧菌(Butyrivibrio fibrisol-vens)数量显著减少(P<0.05),分别降低了78%和31%、30%和36%、27%和23%、6%和13%。通过该方法的结果表明日粮中添加4%的豆油和胡麻油显著减少了瘤胃中纤维分解菌,对产琥珀酸丝状杆菌的影响明显。而且采用Real-ti me PCR方法对瘤胃纤维分解菌进行定量,可以快速有效反映出在日粮改变的情况下菌的数量变化趋势,相对于传统计数方法更直观、快捷与准确。 展开更多
关键词 real-time pcr 瘤胃纤维菌 定量 肉牛
下载PDF
上一页 1 2 250 下一页 到第
使用帮助 返回顶部