Rhododendron is famous for its high ornamental value.However,the genus is taxonomically difficult and the relationships within Rhododendron remain unresolved.In addition,the origin of key morphological characters with...Rhododendron is famous for its high ornamental value.However,the genus is taxonomically difficult and the relationships within Rhododendron remain unresolved.In addition,the origin of key morphological characters with high horticulture value need to be explored.Both problems largely hinder utilization of germplasm resources.Most studies attempted to disentangle the phylogeny of Rhododendron,but only used a few genomic markers and lacked large-scale sampling,resulting in low clade support and contradictory phylogenetic signals.Here,we used restriction-site associated DNA sequencing(RAD-seq)data and morphological traits for 144 species of Rhododendron,representing all subgenera and most sections and subsections of this species-rich genus,to decipher its intricate evolutionary history and reconstruct ancestral state.Our results revealed high resolutions at subgenera and section levels of Rhododendron based on RAD-seq data.Both optimal phylogenetic tree and split tree recovered five lineages among Rhododendron.Subg.Therorhodion(cladeⅠ)formed the basal lineage.Subg.Tsutsusi and Azaleastrum formed cladeⅡand had sister relationships.CladeⅢincluded all scaly rhododendron species.Subg.Pentanthera(cladeⅣ)formed a sister group to Subg.Hymenanthes(cladeⅤ).The results of ancestral state reconstruction showed that Rhododendron ancestor was a deciduous woody plant with terminal inflorescence,ten stamens,leaf blade without scales and broadly funnelform corolla with pink or purple color.This study shows significant distinguishability to resolve the evolutionary history of Rhododendron based on high clade support of phylogenetic tree constructed by RAD-seq data.It also provides an example to resolve discordant signals in phylogenetic trees and demonstrates the application feasibility of RAD-seq with large amounts of missing data in deciphering intricate evolutionary relationships.Additionally,the reconstructed ancestral state of six important characters provides insights into the innovation of key characters in Rhododendron.展开更多
Azalea is a general designation of Rhododendron in the Ericaceae family.Rhododendron not only has high ornamental value but also has application value in ecological protection,medicine,and scientific research.In this ...Azalea is a general designation of Rhododendron in the Ericaceae family.Rhododendron not only has high ornamental value but also has application value in ecological protection,medicine,and scientific research.In this study,we used Illumina and PacBio sequencing to assemble and annotate the entire chloroplast genomes(cp genomes)of four Rhododendron species.The chloroplast genomes of R.concinnum,R.henanense subsp.lingbaoense,R.micranthum,and R.simsii were assembled into 207,236,208,015,207,233,and 206,912 bp,respectively.All chloroplast genomes contain eight rRNA genes,with either 88 or 89 protein-coding genes.The four cp genomes were compared and analyzed by bioinformatics,and the phylogenetic analysis based on chloroplast genomes of 26 species of Ericaceae,Actinidiaceae,and Primulaceae under Ericales was conducted.A comparison of the linear structure of cp genomes of four Rhododendron showed that there were substantial sequence similarities in coding regions,but high differences in non-coding regions.A phylogenetic analysis,based on chloroplast whole genome sequences,showed that all Rhododendron species are in the clade Ericaceae.This study provides valuable genetic information for the study of population genetics and evolutionary relationships in Rhododendron and other azalea species.展开更多
Tsutsusi is one of the eight subgenera of the Rhododendron genus.Four Tsutsusi species,R.indicum,R.simisii,R.oldhamii,and R.schlippenbachii,have high ornamental and medicinal values,resulting in an increasing market d...Tsutsusi is one of the eight subgenera of the Rhododendron genus.Four Tsutsusi species,R.indicum,R.simisii,R.oldhamii,and R.schlippenbachii,have high ornamental and medicinal values,resulting in an increasing market demand.These species thrive in cool and humid environments and are widely distributed in Europe and Asia.Whether global climate warming will affect the distribution of these valuable resources remains unclear.Thus,this study analyzed the climatic suitability of these species for the first time on the basis of 1552 geographical distribution points and 19 bioclimatic factors using the maximum entropy model.The results show that a suitable distribution area for all four species would decrease under climate warming.The main bioclimatic factors affecting their distribution are the mean temperature of the coldest quarter for R.indicum,the mean diurnal range for R.simisii,and precipitation of the warmest quarter for R.oldhamii and R.schlippenbachii.In addition,the contribution of the temperature-related bioclimatic factors to the distribution of R.indicum and R.simisii is higher than that of the associated precipitation-related climatic factors;in contrast,the contribution of precipitation-related bioclimatic factors to the distribution of R.oldhamii and R.schlippenbachii is higher than that of the temperature-related climatic factors.These results provide references for the introduction,conservation,sustainable development,and utilization of these four species in the future,and may also provide information with regards to other Rhododendron species.展开更多
Taking Wutong Mountain Rhododendron moulmainense ecological landscape forest in Shenzhen City as an example,the value of the forest was assessed by constructing an ecological service value assessment system and accoun...Taking Wutong Mountain Rhododendron moulmainense ecological landscape forest in Shenzhen City as an example,the value of the forest was assessed by constructing an ecological service value assessment system and accounting method.The assessment results showed that the total ecosystem service value of R.moulmainense ecological landscape forest was 13.195 billion yuan,and the top three services included the value of forestry products,the value of biodiversity maintenance and the value of leisure and recreation,indicating that the ecosystem service of Wutong Mountain R.moulmainense ecological landscape forest in Shenzhen has great ecological and economic value,especially in forestry products,biodiversity maintenance,and leisure and recreation.展开更多
基金supported by Ten Thousand Talent Program of Yunnan Province(Grant No.YNWR-QNBJ-2018-174)the Key Basic Research Program of Yunnan Province,China(Grant No.202101BC070003)+3 种基金National Natural Science Foundation of China(Grant No.31901237)Conservation Program for Plant Species with Extremely Small Populations in Yunnan Province(Grant No.2022SJ07X-03)Key Technologies Research for the Germplasmof Important Woody Flowers in Yunnan Province(Grant No.202302AE090018)Natural Science Foundation of Guizhou Province(Grant No.Qiankehejichu-ZK2021yiban 089&Qiankehejichu-ZK2023yiban 035)。
文摘Rhododendron is famous for its high ornamental value.However,the genus is taxonomically difficult and the relationships within Rhododendron remain unresolved.In addition,the origin of key morphological characters with high horticulture value need to be explored.Both problems largely hinder utilization of germplasm resources.Most studies attempted to disentangle the phylogeny of Rhododendron,but only used a few genomic markers and lacked large-scale sampling,resulting in low clade support and contradictory phylogenetic signals.Here,we used restriction-site associated DNA sequencing(RAD-seq)data and morphological traits for 144 species of Rhododendron,representing all subgenera and most sections and subsections of this species-rich genus,to decipher its intricate evolutionary history and reconstruct ancestral state.Our results revealed high resolutions at subgenera and section levels of Rhododendron based on RAD-seq data.Both optimal phylogenetic tree and split tree recovered five lineages among Rhododendron.Subg.Therorhodion(cladeⅠ)formed the basal lineage.Subg.Tsutsusi and Azaleastrum formed cladeⅡand had sister relationships.CladeⅢincluded all scaly rhododendron species.Subg.Pentanthera(cladeⅣ)formed a sister group to Subg.Hymenanthes(cladeⅤ).The results of ancestral state reconstruction showed that Rhododendron ancestor was a deciduous woody plant with terminal inflorescence,ten stamens,leaf blade without scales and broadly funnelform corolla with pink or purple color.This study shows significant distinguishability to resolve the evolutionary history of Rhododendron based on high clade support of phylogenetic tree constructed by RAD-seq data.It also provides an example to resolve discordant signals in phylogenetic trees and demonstrates the application feasibility of RAD-seq with large amounts of missing data in deciphering intricate evolutionary relationships.Additionally,the reconstructed ancestral state of six important characters provides insights into the innovation of key characters in Rhododendron.
基金supported by the National Natural Science Foundation of China[Grant No.31870697].
文摘Azalea is a general designation of Rhododendron in the Ericaceae family.Rhododendron not only has high ornamental value but also has application value in ecological protection,medicine,and scientific research.In this study,we used Illumina and PacBio sequencing to assemble and annotate the entire chloroplast genomes(cp genomes)of four Rhododendron species.The chloroplast genomes of R.concinnum,R.henanense subsp.lingbaoense,R.micranthum,and R.simsii were assembled into 207,236,208,015,207,233,and 206,912 bp,respectively.All chloroplast genomes contain eight rRNA genes,with either 88 or 89 protein-coding genes.The four cp genomes were compared and analyzed by bioinformatics,and the phylogenetic analysis based on chloroplast genomes of 26 species of Ericaceae,Actinidiaceae,and Primulaceae under Ericales was conducted.A comparison of the linear structure of cp genomes of four Rhododendron showed that there were substantial sequence similarities in coding regions,but high differences in non-coding regions.A phylogenetic analysis,based on chloroplast whole genome sequences,showed that all Rhododendron species are in the clade Ericaceae.This study provides valuable genetic information for the study of population genetics and evolutionary relationships in Rhododendron and other azalea species.
基金supported by the National Natural Science Foundation of China(32260415)Guizhou Provincial Science and Technology Project(Qianke Combination Foundation-ZK[2023]Key 010)。
文摘Tsutsusi is one of the eight subgenera of the Rhododendron genus.Four Tsutsusi species,R.indicum,R.simisii,R.oldhamii,and R.schlippenbachii,have high ornamental and medicinal values,resulting in an increasing market demand.These species thrive in cool and humid environments and are widely distributed in Europe and Asia.Whether global climate warming will affect the distribution of these valuable resources remains unclear.Thus,this study analyzed the climatic suitability of these species for the first time on the basis of 1552 geographical distribution points and 19 bioclimatic factors using the maximum entropy model.The results show that a suitable distribution area for all four species would decrease under climate warming.The main bioclimatic factors affecting their distribution are the mean temperature of the coldest quarter for R.indicum,the mean diurnal range for R.simisii,and precipitation of the warmest quarter for R.oldhamii and R.schlippenbachii.In addition,the contribution of the temperature-related bioclimatic factors to the distribution of R.indicum and R.simisii is higher than that of the associated precipitation-related climatic factors;in contrast,the contribution of precipitation-related bioclimatic factors to the distribution of R.oldhamii and R.schlippenbachii is higher than that of the temperature-related climatic factors.These results provide references for the introduction,conservation,sustainable development,and utilization of these four species in the future,and may also provide information with regards to other Rhododendron species.
文摘Taking Wutong Mountain Rhododendron moulmainense ecological landscape forest in Shenzhen City as an example,the value of the forest was assessed by constructing an ecological service value assessment system and accounting method.The assessment results showed that the total ecosystem service value of R.moulmainense ecological landscape forest was 13.195 billion yuan,and the top three services included the value of forestry products,the value of biodiversity maintenance and the value of leisure and recreation,indicating that the ecosystem service of Wutong Mountain R.moulmainense ecological landscape forest in Shenzhen has great ecological and economic value,especially in forestry products,biodiversity maintenance,and leisure and recreation.
