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Genetic dissection of and genomic selection for seed weight, pod length,and pod width in soybean
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作者 Yijie Chen Yajun Xiong +9 位作者 Huilong Hong Gang Li Jie Gao Qingyuan Guo Rujian Sun Honglei Ren Fan Zhang Jun Wang Jian Song Lijuan Qiu 《The Crop Journal》 SCIE CSCD 2023年第3期832-841,共10页
A biparental soybean population of 364 recombinant inbred lines(RILs)derived from Zhongdou 41×ZYD02.878 was used to identify quantitative trait loci(QTL)associated with hundred-seed weight(100-SW),pod length(PL),... A biparental soybean population of 364 recombinant inbred lines(RILs)derived from Zhongdou 41×ZYD02.878 was used to identify quantitative trait loci(QTL)associated with hundred-seed weight(100-SW),pod length(PL),and pod width(PW).100-SW,PL,and PW showed moderate correlations among one another,and 100-SW was correlated most strongly with PW(0.64–0.74).Respectively 74,70,75 and19 QTL accounting for 38.7%–78.8%of total phenotypic variance were identified by inclusive composite interval mapping,restricted two-stage multi-locus genome-wide association analysis,3 variancecomponent multi-locus random-SNP-effect mixed linear model analysis,and conditional genome-wide association analysis.Of these QTL,189 were novel,and 24 were detected by multiple methods.Six loci were associated with 100-SW,PL,and PW and may be pleiotropic loci.A total of 284 candidate genes were identified in colocalizing QTL regions,including the verified gene Seed thickness 1(ST1).Eleven genes with functions involved in pectin biosynthesis,phytohormone,ubiquitin-protein,and photosynthesis pathways were prioritized by examining single nucleotide polymorphism(SNP)variation,calculating genetic differentiation index,and inquiring gene expression.The prediction accuracies of genomic selection(GS)for 100-SW,PL,and PW based on single trait-associated markers reached 0.82,0.76,and 0.86 respectively,but selection index(SI)-assisted GS strategy did not increase GS efficiency and inclusion of trait-associated markers as fixed effects reduced prediction accuracy.These results shed light on the genetic basis of 100-SW,PL,and PW and provide GS models for these traits with potential application in breeding programs. 展开更多
关键词 SOYBEAN seed weight Pod size Genetic analysis Genomic selection
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Detection of new candidate genes controlling seed weight by integrating gene coexpression analysis and QTL mapping in Brassica napus L.
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作者 Hongli Dong Lei Yang +9 位作者 Yilin Liu Guifu Tian Huan Tang Shuangshuang Xin Yixin Cui Qing Xiong Huafang Wan Zhi Liu Christian Jung Wei Qian 《The Crop Journal》 SCIE CSCD 2023年第3期842-851,共10页
Seed weight is a component of seed yield in rapeseed(Brassica napus L.).Although quantitative trait loci(QTL)for seed weight have been reported in rapeseed,only a few causal quantitative trait genes(QTGs)have been ide... Seed weight is a component of seed yield in rapeseed(Brassica napus L.).Although quantitative trait loci(QTL)for seed weight have been reported in rapeseed,only a few causal quantitative trait genes(QTGs)have been identified,resulting in a limitation in understanding of seed weight regulation.We constructed a gene coexpression network at the early seed developmental stage using transcripts of 20,408 genes in QTL intervals and 1017 rapeseed homologs of known genes from other species.Among the 10 modules in this gene coexpression network,modules 1 and 2 were core modules and contained genes involved in source–flow–sink processes such as synthesis and transportation of fatty acid and protein,and photosynthesis.A hub gene SERINE CARBOXYPEPTIDASE-LIKE 19(SCPL19)was identified by candidate gene association analysis in rapeseed and functionally investigated using Arabidopsis T-DNA mutant and overexpression lines.Our study demonstrates the power of gene coexpression analysis to prioritize candidate genes from large candidate QTG sets and enhances the understanding of molecular mechanism for seed weight at the early developmental stage in rapeseed. 展开更多
关键词 Brassica napus L Gene coexpression network Quantitative trait gene SCPL19 seed weight
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BnaUBP15s positively regulates seed size and seed weight in Brassica napus
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作者 Jianwei Gu Jiayin Chen +1 位作者 Jie Xia Dengfeng Hong 《Oil Crop Science》 CSCD 2023年第3期149-155,共7页
Brassica napus(B.napus)is a globally significant oilseed crop,making a substantial contribution to both human oil and livestock feed production.Enhancing seed weight is crucial for improving rapeseed yield;however,onl... Brassica napus(B.napus)is a globally significant oilseed crop,making a substantial contribution to both human oil and livestock feed production.Enhancing seed weight is crucial for improving rapeseed yield;however,only a limited number of seed weight-related genes have been functionally validated in B.napus thus far.UBIQUITINSPECIFIC PROTEASE 15(UBP15)belongs to the ubiquitin protease pathway and plays a maternal role in prolonging seed development in Arabidopsis.The potential utilization of UBP15 for enhancing seed yield in B.napus has remained unexplored until now.In this study,we identified the orthologs of UBP15 in B.napus and investigated its functionality using the CRISPR-Cas9 system.We generated mutant plants with multiple editing types targeting Bnaubp15s and successfully isolated T-DNA-free homozygous mutant lines that exhibited edits across four homologs of BnaUBP15 in T2 generation plants.Our preliminary data demonstrated that mutation of BnaUBP15s significantly reduced seed size,seed weight,and plant height while noticeably increasing the number of primary branches.These findings not only provide crucial evidence for further elucidating the molecular mechanism underlying the regulation of seed weight and size by BnaUBP15s but also offer promising novel germplasm for enhancing plant architecture. 展开更多
关键词 UBP 15 CRISPR-Cas9 seed size seed weight Brassica napus
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Meta-Analysis of 100-Seed Weight QTLs in Soybean 被引量:2
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作者 QI Zhao-ming SUN Ya-nan +4 位作者 WANG Jia-lin ZHANG Da-wei LIU Chun-yan HU Guo-hua CHEN Qing-shan 《Agricultural Sciences in China》 CAS CSCD 2011年第3期327-334,共8页
100-seed weight is a very complicated quantitative trait of yield. The study of gene mapping for yield trait in soybean is very important for application. However, the mapping result of 100-seed weight was dispersed, ... 100-seed weight is a very complicated quantitative trait of yield. The study of gene mapping for yield trait in soybean is very important for application. However, the mapping result of 100-seed weight was dispersed, the public map should be chosen which was suitable for the published results integrated, and to improve yield. In this research, an integrated map of 100-seed weight QTLs in soybean had been established with soymap2 published in 2004 as a reference map. QTLs of 100-seed weight in soybean were collected in recent 20 yr. With the software BioMercator 2.1, QTLs from their own maps were projected to the reference map. From published papers, 65 QTLs of 100-seed weight were collected and 53 QTLs were integrated, including 17 reductive effect QTLs and 36 additive effect QTLs. 12 clusters of QTLs were found in the integrated map. A method of meta-analysis was used to narrow down the confidence interval, and 6 additive QTLs and 6 reductive QTLs and their corresponding markers were obtained respectively. The minimum confidence interval (C.I.) was shrunk to 1.52 cM. These results would lay the foundation for marker-assisted selection and mapping QTL precisely, as well as QTL gene cloning in soybean. 展开更多
关键词 QTL定位 种子重量 Meta分析 大豆 分子标记辅助选择 产量性状 加性效应 置信区间
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Dt1 inhibits SWEET-mediated sucrose transport to regulate photoperiod-dependent seed weight in soybean
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作者 Xiaoming Li Zhonghui Chen +14 位作者 Haiyang Li Lin Yue Cuirong Tan Hongjie Liu Yilong Hu Yuhua Yang Xiani Yao Lingping Kong Xiang Huangi Bin Yu Chunyu Zhang Yuefeng Guan Baohui Liu Fanjiang Kong Xingliang Hou 《Molecular Plant》 SCIE CSCD 2024年第3期496-508,共13页
Soybean is a photoperiod-sensitive short-day crop whose reproductive period and yield are markedly affected by day-length changes.Seed weight is one of the key traits determining the soybean yield;how-ever,the promine... Soybean is a photoperiod-sensitive short-day crop whose reproductive period and yield are markedly affected by day-length changes.Seed weight is one of the key traits determining the soybean yield;how-ever,the prominent genes that control the final seed weight of soybean and the mechanisms underlying the photoperiod's effect on this trait remain poorly understood.In this study,we identify SwW19 as a major locus controlling soybean seed weight by QTL mapping and determine Dt1,an orthologous gene of Arabidopsis TFL1 that is known to govern the soybean growth habit,as the causal gene of the SW19 locus.We showed that Dt1 is highly expressed in developing seeds and regulates photoperiod-dependent seed weight in soybean.Further analyses revealed that the Dt1 protein physically interacts with the sucrose transporter GmSWEET10a to negatively regulate the import of sucrose from seed coat to the embryo,thus modulating seed weight under long days.However,Dt1 does not function in seed development under short days due to its very low expression.Importantly,we discovered a novel natural allelic variant of Dt1(H4 haplotype)that decouples its pleiotropic effects on seed size and growth habit;i.e.,this variant remains functional in seed development but fails to regulate the stem growth habit of soybean.Collectively,our findings provide new insights into how soybean seed development responds to photoperiod at different latitudes,offering an ideal genetic component for improving soybean's yield by manipulating its seed weightandgrowth habit. 展开更多
关键词 SOYBEAN seed weight PHOTOPERIOD dt1 sucrose transport
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Differential SW16.1 allelic effects and genetic backgrounds contributed to increased seed weight after soybean domestication 被引量:1
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作者 Xianlian Chen Cheng Liu +20 位作者 Pengfei Guo Xiaoshuai Hao Yongpeng Pan Kai Zhang Wusheng Liu Lizhi Zhao Wei Luo Jianbo He Yanzhu Su Ting Jin Fenfen Jiang Si Wang Fangdong Liu Rongzhou Xie Changgen Zhen Wei Han Guangnan Xing Wubin Wang Shancen Zhao Yan Li Junyi Gai 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2023年第7期1734-1752,共19页
Although seed weight has increased following domestication from wild soybean(Glycine soja) to cultivated soybean(Glycine max), the genetic basis underlying this change is unclear. Using mapping populations derived fro... Although seed weight has increased following domestication from wild soybean(Glycine soja) to cultivated soybean(Glycine max), the genetic basis underlying this change is unclear. Using mapping populations derived from chromosome segment substitution lines of wild soybean, we identified SW16.1 as the causative gene underlying a major quantitative trait locus controlling seed weight.SW16.1 encodes a nucleus-localized LIM domaincontaining protein. Importantly, the GsSW16.1 allele from wild soybean accession N24852 had a negative effect on seed weight, whereas the GmSW16.1 allele from cultivar NN1138-2 had a positive effect. Gene expression network analysis,reverse-transcription quantitative polymerase chain reaction, and promoter-luciferase reporter transient expression assays suggested that SW16.1 regulates the transcription of MT4, a positive regulator of seed weight. The natural variations in SW16.1 and other known seed weight genes were analyzed in soybean germplasm. The SW16.1 polymorphism was associated with seed weight in 247 soybean accessions, showing much higher frequency of positive-effect alleles in cultivated soybean than in wild soybean. Interestingly,gene allele matrix analysis of the known seed weight genes revealed that G. max has lost 38.5%of the G. soja alleles and that most of the lost alleles had negative effects on seed weight. Our results suggest that eliminating negative alleles from G. soja led to a higher frequency of positive alleles and changed genetic backgrounds in G. max,which contributed to larger seeds in cultivated soybean after domestication from wild soybean.Our findings provide new insights regarding soybean domestication and should assist current soybean breeding programs. 展开更多
关键词 DOMESTICATION natural variation positional cloning QTL seed weight SOYBEAN SW16.1
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A loss-of-function mutant allele of a glycosyl hydrolase gene has been co-opted for seed weight control during soybean domestication 被引量:1
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作者 Siming Wei Bin Yong +7 位作者 Hongwei Jiang Zhenghong An Yan Wang Bingbing Li Ce Yang Weiwei Zhu Qingshan Chen Chaoying He 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2023年第11期2469-2489,共21页
The resultant DNA from loss-of-function mutation can be recruited in biological evolution and development.Here,we present such a rare and potential case of“to gain by loss”as a neomorphic mutation during soybean dom... The resultant DNA from loss-of-function mutation can be recruited in biological evolution and development.Here,we present such a rare and potential case of“to gain by loss”as a neomorphic mutation during soybean domestication for increasing seed weight.Using a population derived from a chromosome segment substitution line of Glycine max(SN14)and Glycine soja(ZYD06),a quantitative trait locus(QTL)of 100-seed weight(q HSW)was mapped on chromosome 11,corresponding to a truncatedβ-1,3-glucosidase(βGlu)gene.The novel gene hsw results from a 14-bp deletion,causing a frameshift mutation and a premature stop codon in theβGlu.In contrast to HSW,the hsw completely lostβGlu activity and function but acquired a novel function to promote cell expansion,thus increasing seed weight.Overexpressing hsw instead of HSW produced large soybean seeds,and surprisingly,truncating hsw via gene editing further increased the seed size.We further found that the core 21-aa peptide of hsw and its variants acted as a promoter of seed size.Transcriptomic variation in these transgenic soybean lines substantiated the integration hsw into cell and seed size control.Moreover,the hsw allele underwent selection and expansion during soybean domestication and improvement.Our work cloned a likely domesticated QTL controlling soybean seed weight,revealed a novel genetic variation and mechanism in soybean domestication,and provided new insight into crop domestication and breeding,and plant evolution. 展开更多
关键词 DOMESTICATION frameshift mutation QTL seed weight SOYBEAN to gain by loss
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A PP2C-1 Allele Underlying a Quantitative Trait Locus Enhances Soybean l O0-Seed Weight 被引量:17
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作者 Xiang Lu Qing Xiong +11 位作者 Tong Cheng Qing-Tian Li Xin-Lei Liu Ying-Dong Bi Wei Li Wan-Ke Zhang Biao Ma Yong-Cai Lai Wei-Guang Du Wei-Qun Man Shou-Yi Chen Jin-Song Zhang 《Molecular Plant》 SCIE CAS CSCD 2017年第5期670-684,共15页
栽培大豆可以在驯服期间失去某有用基因 loci。从野大豆的基因的基因渗入能拓宽基因背景并且改进大豆农学的特点。在这研究,通过 recombinant 的整个染色体的定序,生来的线人口源于在野大豆 ZYD7 和栽培大豆 HN44 之间的一个十字,并... 栽培大豆可以在驯服期间失去某有用基因 loci。从野大豆的基因的基因渗入能拓宽基因背景并且改进大豆农学的特点。在这研究,通过 recombinant 的整个染色体的定序,生来的线人口源于在野大豆 ZYD7 和栽培大豆 HN44 之间的一个十字,并且为种子重量量的特点 loci 印射,我们发现从野大豆 ZYD7 的磷酸酶 2C-1 ( PP2C-1 )等位基因在种子重量/尺寸贡献增加。PP2C-1 可以由提高覆盖物的房间尺寸并且激活一个子集完成这功能播种特点相关的基因。我们发现 PP2C-1 与 GmBZR1 被联系, Arabidopsis BZR1 的大豆 ortholog,之一在发信号的 brassinosteroid (BR ) 给抄写因素调音,并且便于 dephosphorylated GmBZR1 的累积。相反,有在 N 终点的一些氨基酸的变化的 PP2C-2 等位基因没展出这功能。而且,我们证明 GmBZR1 能在转基因的植物支持种子重量 / 尺寸。通过栽培大豆就职的分析,我们发现 40% 检验就职没有 PP2C-1 等位基因,建议这些就职能被这等位基因的介绍改进。一起拿,我们的学习识别精英等位基因 PP2C-1,它能在由分子帮助繁殖的这等位基因的那操作可以增加的大豆,和针尖提高种子重量或尺寸在大豆的生产和另外的荚 / 庄稼。 展开更多
关键词 大豆 100 种子重量 PP2C-1 BZR1
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大豆株型与产量相关性状QTL定位及候选基因预测
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作者 滕卫丽 高鹏 +7 位作者 刘晨煦 赵慧艳 岳阳 史飞飞 林峰 赵雪 韩英鹏 李文滨 《东北农业大学学报》 CAS CSCD 北大核心 2024年第1期1-13,共13页
为探究与大豆株型和产量相关QTL位点及候选基因,对以东农42(♀)和东农50(♂)为亲本,与168个家系构建的F_(2:12)、F_(2:13)重组自交系(Recombination inbred lines,RILs)群体的株高、分枝数、四粒荚数、百粒重性状测定表型数据,运用IBM S... 为探究与大豆株型和产量相关QTL位点及候选基因,对以东农42(♀)和东农50(♂)为亲本,与168个家系构建的F_(2:12)、F_(2:13)重组自交系(Recombination inbred lines,RILs)群体的株高、分枝数、四粒荚数、百粒重性状测定表型数据,运用IBM SPSS Statistics、R语言进行统计和相关性分析,并利用完备区间作图法(Inclusive composite interval mapping,ICIM)进行加性效应及上位效应分析,共计定位到43个QTL位点,贡献率超过10%的主效位点为14个,包括株高3个、分枝数8个、四粒荚数1个和百粒重2个;其中11个位点与前人已报道位点重合,分别位于4、6、8、16和19号染色体上;qBN-6-2(13.21%)、qBN-6-5(19.96%)和qBN-6-6(13.69%)为3个环境重复定位到的位点,qHSW-19-1与多个已报道位点均有重合。通过上位性分析,获得株高、分枝数、四粒荚数和百粒重位点分别为3、6、6和62对。根据所定位到的物理区间和定量预测,筛选到Glyma.04G238800、Glyma.03G181600、Glyma.08G271900、Glyma.18G278800和Glyma.19G187000等5个与株高、分枝数、四粒荚数和百粒重性状相关的候选基因,为分子辅助育种奠定基础。 展开更多
关键词 大豆 株高 分枝数 四粒荚数 百粒重 QTL
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Rapid Determination of Seed Number and Thousand Kernel Weight of Asparagus officinalis L.Using Image Processing Method
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作者 Huimin GAO Yu TIAN +1 位作者 Zhiqiang LIU Yanpo CAO 《Asian Agricultural Research》 2019年第11期53-55,共3页
Asparagus officinalis L.is favored by its high health function,but its hybrid seeds are expensive.The amount of seed,seed plumpness and germination rate are related to the production costs of breeding enterprises and ... Asparagus officinalis L.is favored by its high health function,but its hybrid seeds are expensive.The amount of seed,seed plumpness and germination rate are related to the production costs of breeding enterprises and large growers.Therefore,it is necessary to investigate the seed number and thousand kernel weight of A.officinalis L.This study developed a quick and accurate method to measure the seed number and thousand kernel weight of A.officinalis L.using image processing technology.Seed sample of A.officinalis L.was scanned with 200 dpi resolution,and the seed number was then obtained using Image-ProPlus software.After weighing the seeds,thousand kernel weight was finally calculated.By recording‘macro’,the batch processing of the samples can also be realized.This method is simple and accurate,and can greatly save the time of investigation. 展开更多
关键词 ASPARAGUS OFFICINALIS L. seed number Thousand KERNEL weight Image processing method
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Diversity in seed oil content and fatty acid composition in Acer species with potential as sources of nervonic acid 被引量:8
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作者 Xing He De-Zhu Li Bo Tian 《Plant Diversity》 SCIE CAS CSCD 2021年第1期86-92,共7页
Nervonic acid(NA,cis-15-tetracosenoic acid)is a very long-chain monounsaturated fatty acid that has been shown to be a core component of nerve fibers and nerve cells.It can be used to treat and prevent many neurologic... Nervonic acid(NA,cis-15-tetracosenoic acid)is a very long-chain monounsaturated fatty acid that has been shown to be a core component of nerve fibers and nerve cells.It can be used to treat and prevent many neurological diseases.At present,commercially available NA is mainly derived from Acer truncatum seeds,which contain about 5%e6%NA in their seed oil.The aim of this study were to identify and analyze NA-containing Acer species that could be used as NA resource plants.For this purpose,46 Acer species seeds were collected in China and in some or all of the seed oils from these species 15 fatty acids were detected,including linoleic acid,oleic acid(C18:1D9,C18:1D11),erucic acid,palmitic acid,NA,linolenic acid(C18:3D6,9,12,C18:3D9,12,15),eicosenoic acid(C20:1D11,C20:1D13),stearic acid,behenic acid,tetracosanoic acid,arachidic acid,and docosadienoic acid.Nervonic acid was detected in all samples,but the content was highly variable among species.NA content over 9%was detected in eleven species,of which Acer elegantulum had the highest levels(13.90%).The seed oil content,seed weight,and fatty acid profiles varied among species,but the comprehensive evaluation value(W)showed that A.coriaceifolium could be a new potential NA resources plant.The results also showed that NA was significantly negatively correlated with palmitic acid,oleic acid,and eicosenoic acid,but positively correlated with eicosadienoic acid,behenic acid,erucic acid,and tetracosanoic acid,which indicate the probable pathway for NA biosynthesis in Acer plants.This study has identified Acer species that may serve as NA resources and will help guide subsequent species breeding programs. 展开更多
关键词 ACER Nervonic acid Fatty acid seed oil seed weight
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芥菜型油菜AHK家族成员的全基因组鉴定及调控粒质量性状的初步探索
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作者 游亮 陈浩 +5 位作者 肖华贵 梁峰豪 张超 王璐璐 唐容 杨斌 《华北农学报》 CSCD 北大核心 2024年第1期8-17,共10页
为探究芥菜型油菜AHK家族蛋白的结构特征及其与粒质量性状相关的调控功能,采用生物信息学方法对芥菜型油菜AHK家族成员进行了全基因组鉴定、理化性质、系统发育树、蛋白结构、启动子顺式元件和不同组织表达谱等分析。结果表明,在芥菜型... 为探究芥菜型油菜AHK家族蛋白的结构特征及其与粒质量性状相关的调控功能,采用生物信息学方法对芥菜型油菜AHK家族成员进行了全基因组鉴定、理化性质、系统发育树、蛋白结构、启动子顺式元件和不同组织表达谱等分析。结果表明,在芥菜型油菜基因组中共鉴定到19条BjAHK蛋白序列,系统发育树分析将BjAHK家族成员分为了4个分支,即G1(BjAHK2~BjAHK4)、G2(BjAHK5)、G3(BjAHK1)和G4(BjCKI1)。功能结构域研究发现,BjAHK家族成员具有6个核心基序(Motif1~Motif6),与HisKA、HATPase_c和REC保守结构域相对应,其中BjAHK1~BjAHK4和BjCKI1蛋白的N端含有较为保守的跨膜结构域,可能与其跨膜作用功能有关。不同组织表达谱研究发现,细胞分裂素受体蛋白基因(BjAHK2~BjAHK4)为泛表达基因,且在根组织中表达量最高。结合已有的芥菜型油菜粒质量性状转录组数据,成功挖掘出4个可能参与粒质量性状调控的基因BjA07.AHK3、BjB03.AHK3、BjA10.AHK5和BjB05.AHK5。其中,BjA07.AHK3和BjB03.AHK3可能正向调控种子发育,而BjA10.AHK5和BjB05.AHK5则负向调控。结合BjAHK基因家族分析和转录组测序结果,推测BjAHK3和BjAHK5基因在调控芥菜型油菜种子发育方面发挥重要功能。 展开更多
关键词 芥菜型油菜 AHK家族 粒质量性状 表达分析
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优质强筋春小麦种质筛选及高分子量谷蛋白序列分析
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作者 刘颖 刘泮旭 +3 位作者 潘萍萍 张家宁 刘丹 袁卉馥 《天津农业科学》 CAS 2024年第1期6-15,共10页
小麦是重要的口粮作物,加工品质的遗传改良是小麦育种的重要目标之一。为了丰富小麦加工品质育种的基因资源,本研究在收集的种质资源中筛选出农艺性状优良的SG-1、SG-2和SG-3,并对其进行加工品质分析和籽粒储藏蛋白组成分析,并评估它们... 小麦是重要的口粮作物,加工品质的遗传改良是小麦育种的重要目标之一。为了丰富小麦加工品质育种的基因资源,本研究在收集的种质资源中筛选出农艺性状优良的SG-1、SG-2和SG-3,并对其进行加工品质分析和籽粒储藏蛋白组成分析,并评估它们在育种上的利用价值和方式,使用SDS-PAGE、A-PAGE、高分子量谷蛋白亚基编码基因测序、SDS沉降值分析等技术,对这些小麦品种的籽粒储藏蛋白亚基组成进行分析。研究发现,SG-1携带非优质的高分子量谷蛋白亚基Dx2+Dy12,而SG-2和SG-3携带优质的高分子量谷蛋白亚基Dx5+Dy10。在醇溶蛋白方面,3份资源都检测到了γ-1型醇溶蛋白,但只有SG-3检测到了γ-2型醇溶蛋白。加工品质分析显示,SG-1的加工品质优于天津推广的优质强筋春小麦品种津强6号。高分子量谷蛋白亚基序列分析发现,SG-1和SG-3在By8亚基存在序列变异,表明尽管它们在SDS-PAGE水平上亚基类型一致,但在DNA序列上仍然存在变异。本研究结果初步解释了携带优质亚基的小麦品种在加工品质上表现不佳的原因可能是DNA序列存在差异。同时,研究人员还发现携带非优质亚基但具有优良加工品质的SG-1,说明SG-1可能存在其他能够提升小麦加工品质的机制。本研究拓宽了小麦加工品质育种的基因资源,并为加工品质形成机制的解析提供了新的资源和理论依据。 展开更多
关键词 小麦 籽粒储藏蛋白 高分子量谷蛋白 醇溶蛋白 加工品质
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杉木第3代种子园无性系种实性状及冠幅性状变异研究
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作者 陈亚斌 《江西科学》 2024年第2期252-256,331,共6页
为评估第3代杉木种子园的建园成效,对漳平五一国有林场第3代杉木种子园的90个无性系的种实性状开展变异规律分析。结果表明,不同建园材料的表型性状间变异明显,变异幅度呈现以下趋势:出籽量>出籽率>单株球果鲜重>千粒重>冠... 为评估第3代杉木种子园的建园成效,对漳平五一国有林场第3代杉木种子园的90个无性系的种实性状开展变异规律分析。结果表明,不同建园材料的表型性状间变异明显,变异幅度呈现以下趋势:出籽量>出籽率>单株球果鲜重>千粒重>冠幅,且各性状间存在显著相关性;冠幅及单株球果鲜重在不同无性系间也存在极显著差异。初选20个优良无性系平均单株球果鲜重、出籽量、出籽率、千粒重和冠幅比群体均值分别提高了24.33%、38.13%、26.15%、10.47%和9.88%。初步评估结果表明,杉木3代不同建园材料的种实性状遗传变异丰富,为后续育种工作提供材料基础;后续可实施育种精细选育并加强建园经营管理;此外,应对筛选出的优良无性系进一步开展测定评估,以此为下一代种子园建设提供建园材料。 展开更多
关键词 杉木 3代种子园 种实性状 变异规律 千粒重
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Effects of grazing intensity on seed production of Caragana stenophylla along a climatic aridity gradient in the Inner Mongolia Steppe,China 被引量:5
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作者 XIE Lina CHEN Weizhong +5 位作者 Christopher A GABLER HAN Lei GUO Hongyu CHEN Qing MA Chengcang GU Song 《Journal of Arid Land》 SCIE CSCD 2016年第6期890-898,共9页
As the increases of climatic aridity and grazing intensity,shrubs play an increasingly important role in grassland ecosystem in arid and semi-arid regions,and its abundance also generally increases.However,the effects... As the increases of climatic aridity and grazing intensity,shrubs play an increasingly important role in grassland ecosystem in arid and semi-arid regions,and its abundance also generally increases.However,the effects of climatic aridity and grazing intensity on sexual reproduction of shrubs in grassland remain largely unclear.In order to understand the effects of grazing intensity and climatic drought stress,and their interaction on seed production of shrub species,we examined the seed number,seed weight and seed yield of Caragana stenophylla under three grazing intensities(fenced,mild grazing and severe grazing) across a climatic aridity gradient(semi-arid,arid,very arid and intensively arid zones) in the Inner Mongolia Steppe,northern China during 2012–2013.The seed number,seed weight and seed yield gradually increased from the semi-arid to the very arid zones,but decreased from the very arid to the intensively arid zones in fenced plots.The seed number and seed yield decreased from the semi-arid to the intensively arid zones in mild and severe grazing treatment plots,therefore,grazing enhanced the suppression effect of climatic aridity on seed production of C.stenophylla.The seed number and seed yield gradually decreased as grazing intensity increased.The seed weight was highest in severe grazing plots,followed by the mild grazing plots and then the fenced plots.Precipitation varied interannually during the study period.We observed that the seed number,seed weight and seed yield were lower in the low precipitation year(2013) than in the high precipitation year(2012).As climatic drought stress increased,the negative effects of grazing on seed production of C.stenophylla also gradually increased.Our results indicated that climatic drought stress may contribute to the encroachment of C.stenophylla shrub in arid zones by promoting its seed production.However,grazing had negative effects on sexual reproduction of C.stenophylla,and the combined effects of drought stress and grazing seriously suppressed sexual reproduction of C.stenophylla in the intensively arid zone. 展开更多
关键词 牧草种子生产 内蒙古草原 气候干旱 放牧强度 生产强度 梯度 中国 草地生态系统
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基于seeds集和频繁项集挖掘的半监督聚类算法 被引量:2
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作者 赵倩 尚学群 王淼 《计算机工程与应用》 CSCD 北大核心 2010年第8期123-126,176,共5页
半监督聚类在无监督学习中通过对少量监督信息的有效利用提高聚类性能。提出一种基于seeds集的半监督聚类算法,它采用Apiori算法对初始seeds集和扩大规模后seeds集的数据进行频繁项集挖掘,使得数据中存在的噪音数据和误标记数据得到净... 半监督聚类在无监督学习中通过对少量监督信息的有效利用提高聚类性能。提出一种基于seeds集的半监督聚类算法,它采用Apiori算法对初始seeds集和扩大规模后seeds集的数据进行频繁项集挖掘,使得数据中存在的噪音数据和误标记数据得到净化、修正,以改善seeds集质量,提高聚类性能。该算法使用带权χ2测试这一数学模型作为分类规则度量指标,以对无标记数据进行类标签值预测。实验结果显示,所提出的结合了频繁项集挖掘和带权χ2测试的基于seeds集的半监督聚类算法不仅改善了seeds集质量,也提高了预测结果的精确度,优化了聚类性能。 展开更多
关键词 半监督聚类 频繁项集挖掘 带权χ2测试 seeds集
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Variability in cone and seed characteristics and seed testing in various provenances of Himalayan spruce (Picea smithiana) 被引量:1
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作者 B. S. Rawat A. K. Uniyal 《Journal of Forestry Research》 SCIE CAS CSCD 2011年第4期603-610,共8页
We investigated the effect of provenance variation on cone and seed morphology and germination behaviour under different pre- treatments in Picea smithiana. Three categories of cones were recognized: large (13.18 cm &... We investigated the effect of provenance variation on cone and seed morphology and germination behaviour under different pre- treatments in Picea smithiana. Three categories of cones were recognized: large (13.18 cm × 3.30 cm 15.42 cm × 4.35 cm), medium (10.85 cm × 3.93 cm 12.18 cm × 3.98 cm) and small (7.69 cm × 3.06 10.98 cm× 3.39 cm). Significant variation was observed for various cone and seed characteristics. Seeds moisture content varied from 44.48% to 56.91%, seed size from 0.64 cm × 0.31 cm (largest seed) to 0.49 cm × 0.10 cm (smallest seed), and the seed weight from 2.45 g per 100 seeds to 1.36 g per 100 seeds on fresh weight basis of P. smithiana. The highest seed germination (72.0±7.53%) at 10°C was observed under chilling treatment in Tapovan provenance, while the minimum (15.0±5.71%) seed germina- tion was recorded at 25°C under control set in Tapovan provenance. Further among all the sources Pandukeshwar consistently had the highest average (38%) percent germination across all treatments. Compared to other temperature regimes and pretreatments, seeds subjected to 10°C and chilling treatment had the highest germination and took the least time for germination irrespective of provenance effects. Altitude (provenance) had little or no relationship with germination following laboratory treat- ments. Seeds from Tapovan provenance subjected at 10°C following chilling treatment may be suggested for further multiplication of this species. 展开更多
关键词 种子检验 种子特性 云杉 喜马拉雅 种源 种子含水量 种子发芽 变异
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Identification of a novel seed size associated locus SW9-1 in soybean 被引量:4
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作者 Jiajia Li Jinghui Zhao +8 位作者 Yinghui Li Yali Gao Sunan Hua Muhammad Nadeem Genlou Sun Wenming Zhang Jinfeng Hou Xiaobo Wang Lijuan Qiu 《The Crop Journal》 SCIE CAS CSCD 2019年第4期548-559,共12页
Seed size is one of the vital traits determining seed appearance, quality, and yield. Untangling the genetic mechanisms regulating soybean 100-seed weight (100-SW), seed length and seed width across environments may p... Seed size is one of the vital traits determining seed appearance, quality, and yield. Untangling the genetic mechanisms regulating soybean 100-seed weight (100-SW), seed length and seed width across environments may provide a theoretical basis for improving seed yield. However, there are few reports related to QTL mapping of 100-SW across multiple ecological regions. In this study, 21 loci associated with seed size traits were identified using a genome-wide association of 5361 single nucleotide polymorphisms (SNPs) across three ecoregions in China, which could explain 8.12%–14.25% of the phenotypic variance respectively. A new locus, named as SW9-1 on chromosome 9 that explained 10.05%–10.93% of the seed weight variance was found significantly related to seed size traits, and was not previously reported. The selection effect analysis showed that SW9-1 locus has a relatively high phenotypic effect (13.67) on 100-SW, with a greater contribution by the accessions with bigger seeds (3.69) than the accessions with small seeds (1.66). Increases in seed weight were accompanied by increases in the frequency of SW9-1T allele, with >90% of the bred varieties with a 100-SW >30 g carrying SW9-1T. Analysis of SW9-1 allelic variation in additional soybean accessions showed that SW9-1T allele accounting for 13.83% of the wild accessions, while in 46.55% and 51.57% of the landraces and bred accessions, respectively, this results indicating that the SW9-1 locus has been subjected to artificial selection during the early stages of soybean breeding, especially the utilization of SW9-1T in edamame for big seed. These results suggest that SW9-1 is a novel and reliable locus associated with seed size traits, and might have an important implication for increasing soybean seed weight in molecular design breeding. Cloning this locus in future may provide new insights into the genetic mechanisms underlying soybean seed size traits. 展开更多
关键词 SOYBEAN [Glycine max (L.) Merr.] seed size/weight SW9-1 Molecular BREEDING
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Extra-Large Seed Germplasms of Brassica Napus Created through Microspore Culture 被引量:1
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作者 Chen Wei Zhao Kaiqin +8 位作者 Zhang Guojian Zhou Picai Zhao Desheng Qu Guan Luo Yangqing Zu Feng Li Jingfeng Dong Yunsong Wang Jingqiao 《Journal of Environmental Science and Engineering(A)》 2016年第2期90-96,共7页
关键词 游离小孢子培养 种子千粒重 甘蓝型油菜 种质 BRASSICA 油菜品种 组成部分 油菜产量
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甘蓝型油菜千粒重全基因组关联分析 被引量:2
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作者 肖小军 韩德鹏 +8 位作者 周会汶 肖国滨 郑伟 李亚贞 黄天宝 肖富良 陈明 吕伟生 周庆红 《中国油料作物学报》 CAS CSCD 北大核心 2023年第3期510-517,共8页
为指导千粒重遗传改良,挖掘甘蓝型油菜千粒重显著关联单核苷酸多态性(SNP)位点及相关候选基因,以300份甘蓝型油菜种质资源为材料,对千粒重进行一年两地表型考察,结合该群体前期开发的201 817个SNP标记,采用一般线性模型(GLM)和混合线性... 为指导千粒重遗传改良,挖掘甘蓝型油菜千粒重显著关联单核苷酸多态性(SNP)位点及相关候选基因,以300份甘蓝型油菜种质资源为材料,对千粒重进行一年两地表型考察,结合该群体前期开发的201 817个SNP标记,采用一般线性模型(GLM)和混合线性模型(MLM)进行全基因组关联分析,对性状显著关联SNP位点两侧100kb区域内相关候选基因进行功能预测。结果表明,300份甘蓝型油菜千粒重在两地均表现出广泛的表型变异,筛选出6份千粒重较高的油菜种质资源。基于GLM、MLM模型分别检测到24个和10个与油菜千粒重显著关联的SNP,其中有8个SNP在2个模型中均被检测到,位于第C02号染色体上Bn-C02-22853028的表型贡献率最大。6个位点附近找到HWS、DA1、DA2、CPL3、bZIP、CSPs、PTR2、ARF2、TRM61等9个拟南芥已报道粒重基因的同源基因。 展开更多
关键词 甘蓝型油菜 全基因组关联分析 千粒重 SNP位点 同源基因
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