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茄子及其近缘野生种遗传多样性的SRAP分析 被引量:10
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作者 房超 李跃建 +4 位作者 帅波 刘独臣 刘小俊 梁根云 杨宏 《西南农业学报》 CSCD 北大核心 2011年第5期1853-1860,共8页
应用SRAP分子标记技术对87份来茄子及其近缘野生种进行了遗传多样性分析。结果显示,从88对SRAP引物中筛选出18对多态性高、稳定性好的引物组合,共检测出309清晰个位点,平均每对引物检测到17.2个扩增位点。.参试茄属植物种质群体位点的... 应用SRAP分子标记技术对87份来茄子及其近缘野生种进行了遗传多样性分析。结果显示,从88对SRAP引物中筛选出18对多态性高、稳定性好的引物组合,共检测出309清晰个位点,平均每对引物检测到17.2个扩增位点。.参试茄属植物种质群体位点的平均杂合度为0.6962;平均多态信息含量为0.6441。82份栽培种茄子材料的平均相似系数为0.822,表明茄子栽培种的基因库较小,遗传基础较为狭窄。聚类分析结果表明,87份材料可分成4大类,可以较好地将茄子栽培种与其近缘野生种分开,并且基本可将高级栽培种(S.melongena L.subsp.melongena)和原始栽培种(S.melongena L.subsp.ovigerum Salis)在亚种水平上区分开来。由此可见,SRAP标记在茄子遗传研究中是一种经济、有效和可靠的分子标记手段。 展开更多
关键词 茄子 遗传多样性 SRAP(sequence-related Amplified Polymorphism)
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Physiological,Biochemical and Molecular Responses of Barley Seedlings to Aluminum Stress 被引量:2
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作者 Xiaoqin Zhang Tao Tong +4 位作者 Bin Tian Yunxia Fang Jiangjie Pan Junjun Zheng Dawei Xue 《Phyton-International Journal of Experimental Botany》 SCIE 2019年第3期253-260,共8页
Barley(Hordeum vulgare L.)is one of the most Aluminum(Al)sensitive cereal species.In this study,the physiological,biochemical,and molecular response of barley seedlings to Al treatment was examined to gain insight int... Barley(Hordeum vulgare L.)is one of the most Aluminum(Al)sensitive cereal species.In this study,the physiological,biochemical,and molecular response of barley seedlings to Al treatment was examined to gain insight into Al response and tolerance mechanisms.The results showed that superoxide dismutase(SOD),peroxidase(POD)and catalase(CAT)activity were inhibited to different degrees following Al exposure.The MDA content also significantly increased with increasing Al concentrations.SRAP results indicated significant differences between Al treatments and controls in terms of SRAP profile,and the genomic template stability(GTS)decreased with increasing Al concentration and duration.These integrative results help to elucidate the underlying mechanisms that the barley response to Al toxicity. 展开更多
关键词 BARLEY Al stress Antioxidant enzymes SRAP(sequence-related amplified polymorphism) GTS(Estimation of genomic template stability)
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Evaluation of SRAP markers efficiency in genetic diversity of Aspergillus flavus from peanut-cropped soils in China
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作者 Chushu Zhang Lifei Zhu +5 位作者 Mian Wang Yueyi Tang Haixiang Zhou Qi Sun Qiang Yu Jiancheng Zhang 《Oil Crop Science》 CSCD 2022年第3期135-141,共7页
In order to evaluation the efficiency of SRAP markers on genetic diversity of Aspergillus flavus,we screened out 17sets of primer pairs which could produce clear and reproducible SRAP bands from 150 SRAP primer pairs.... In order to evaluation the efficiency of SRAP markers on genetic diversity of Aspergillus flavus,we screened out 17sets of primer pairs which could produce clear and reproducible SRAP bands from 150 SRAP primer pairs.The size of SRAP fragments ranged from 120 to 2100 bp.Primer pair Me10/Em9 produced the maximum number of polymorphic bands(12 bands),while Me8/Em13 produced the fewest number of polymorphic bands(only 1).Through analysis genetic diversity ability of different sets of primer pairs,the set of 12 primer pairs was selected for SRAP genetic marker of A.flavus.Cluster analysis was performed based on the genetic similarity coefficients,which ranged from 0.53 to 0.89.A dendrogram assembled using the unweighted pair-group method with arithmetic averages grouped A.flavus samples into 5 main clusters.The results suggested that SRAP marker is a useful molecular technology for the diversity of A.flavus from peanut soils in China. 展开更多
关键词 sequence-related amplified polymorphism Genetic diversity Aspergillus flavus PEANUT Primer screening
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基于SCAR标记和DNA条形码技术的苍术基原鉴别研究
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作者 陈研 冯露露 +1 位作者 黄荣 齐伟辰 《世界科学技术-中医药现代化》 2024年第2期490-501,共12页
目的开发出能同时鉴别北苍术和关苍术的分子标记方法,并探究不同种质资源苍术的遗传进化关系。方法对不同地区北苍术Atractylodes chinensis(Bunge)Koidz及关苍术A.japonica Koidz.ex Kitam基因组DNA的差异片段进行测序,结合SRAP、ISSR... 目的开发出能同时鉴别北苍术和关苍术的分子标记方法,并探究不同种质资源苍术的遗传进化关系。方法对不同地区北苍术Atractylodes chinensis(Bunge)Koidz及关苍术A.japonica Koidz.ex Kitam基因组DNA的差异片段进行测序,结合SRAP、ISSR、DAMD分子标记方法,优化PCR反应体系,筛选并转换成特异性标记,同时,采用条形码方法分析种间序列差异。结果通过SRAP、ISSR、DAMD三种分子标记方法的PCR扩增,共筛选出198对能稳定扩增且重现性好的引物,转换出7对能稳定、快速鉴别北苍术和关苍术的SCAR引物。条形码方法检测出北苍术ITS2序列长度为454 bp,关苍术ITS2序列长度为453 bp,与其他苍术属植物之间遗传距离较远。NJ树结果显示,北苍术、关苍术及其他苍术属植物均各自聚为一支,表现出良好的单系性。依据ITS2二级结构,4种苍术属植物在螺旋区的茎环数目、大小、位置均有明显差异,可以直观地进行区分。结论所开发的特异性SCAR标记为苍术属植物优良品种的筛选提供了新方法,DNA条形码能稳定、准确鉴别北苍术。 展开更多
关键词 北苍术 关苍术 Internal transcribed spacer 2(ITS2) sequence-related amplified polymorphism(SRAP) Inter-simple sequence repeat(ISSR) Direct amplification of minisatellite region DNA(DAMD) Sequence characterized amplified regions(SCAR)
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Construction of a cucumber genetic linkage map with SRAP markers and location of the genes for lateral branch traits 被引量:24
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作者 WANG Gang PAN Junsong LI Xiaozun HE Huanle WU Aizhong CAI Run 《Science China(Life Sciences)》 SCIE CAS 2005年第3期213-220,共8页
Using SRAP (sequence-related amplified polymorphism) markers a genetic linkage map of cucumber was constructed with a population consisting of 138 F2 individuals derived from a cross of the two cucumber lines, S06 and... Using SRAP (sequence-related amplified polymorphism) markers a genetic linkage map of cucumber was constructed with a population consisting of 138 F2 individuals derived from a cross of the two cucumber lines, S06 and S52. In the survey of parental polymorphisms with 182 primer combinations, 64 polymorphism-revealing primer pairs were screened out, which generated totally 108 polymorphic bands with an average of 1.7 bands per primer pair and at most 6 bands from one primer pair. The constructed molecular linkage map included 92 loci, distributed in seven linkage groups and spanning 1164.2 cM in length with an average genetic distance of 12.6 cM between two neighboring loci. Based on this linkage map, the quantitative trait loci (QTL) for the lateral branch number (lbn) and the lateral branch average length (lbl) in cucumber were identified by QTLMapper1.6. A major QTL lbn1 located between ME11SA4B and ME5EM5 in LG2 could explain 10.63% of the total variation with its positively effecting allele from S06. A major QTL lbl1 located between DC1OD3 and DC1EM14 in LG2 could account for 10.38% of the total variation with its positively effecting allele from S06. 展开更多
关键词 cucumber SRAP (sequence-related amplified polymorphism) molecular LINKAGE map lateral branch gene quantitative TRAIT LOCI (QTL).
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