This paper uses a Modified Soil-Plant-Atmosphere Scheme (MSPAS) to study the interaction between land surface and atmospheric boundary layer processes. The scheme is composed of two main parts: atmospheric boundary la...This paper uses a Modified Soil-Plant-Atmosphere Scheme (MSPAS) to study the interaction between land surface and atmospheric boundary layer processes. The scheme is composed of two main parts: atmospheric boundary layer processes and land surface processes. Compared with SiB and BATS, which are famous for their detailed parameterizations of physical variables, this simplified model is more convenient and saves much more computation time. Though simple, the feasibility of the model is well proved in this paper. The numerical simulation results from MSPAS show good agreement with reality. The scheme is used to obtain reasonable simulations for diurnal variations of heat balance, potential temperature of boundary layer, and wind field, and spatial distributions of temperature, specific humidity, vertical velocity, turbulence kinetic energy, and turbulence exchange coefficient over desert and oasis. In addition, MSPAS is used to simulate the interaction between desert and oasis at night, and again it obtains reasonable results. This indicates that MSPAS can be used to study the interaction between land surface processes and the atmospheric boundary layer over various underlying surfaces and can be extended for regional climate and numerical weather prediction study.展开更多
A series of sensitivity tests are performed to test the stability and sensibility of the Modified Soil-Plant-Atmosphere Scheme (MSPAS), which was wholly introduced in a previous paper. The numerical simulation results...A series of sensitivity tests are performed to test the stability and sensibility of the Modified Soil-Plant-Atmosphere Scheme (MSPAS), which was wholly introduced in a previous paper. The numerical simulation results from the experiments show good agreement with physical reality. Besides, some of the results are illuminating. Together with the first paper, it is concluded that MSPAS is a simple but effective model, and it is practically valuable in the research work of desertification control and reforestation in China.展开更多
Endophytes are hypothesized to be transferred across the soil-plant continuum, suggesting both the transfers of endophytes from environment to plant and from plant to soil. To verify this hypothesis and to assess the ...Endophytes are hypothesized to be transferred across the soil-plant continuum, suggesting both the transfers of endophytes from environment to plant and from plant to soil. To verify this hypothesis and to assess the role of locality, we evaluated the similarity of microbial communities commonly found both in soils and endophytic communities in three arid regions, i.e. the Jornada LTER (Long Term Ecological Research) site in New Mexico, USA, and the research station of Jordan University of Science and Technology (JUST) and Khanasd research station in Badia region of Jordan. Rhizosphere and non-rhizosphere soils, leaves and seeds of Atriplex spp. were sampled. Diversity and distribution of bacteria and fungi across the soil-plant continuums were assessed by tag-encoded FLX amplicon pyrosequencing and sequence alignment. Of the total bacterial OTUs (operational taxonomic units), 0.17% in Khanasri research station, 0.16% in research station of JUST, and 0.42% in Jornada LTER site were commonly found across all the plant and soil compartments. The same was true for fungi in two regions, i.e. 1.56% in research station of JUST and 0.86% in Jornada LTER site. However, in Khanasri research station, 12.08% of total fungi OTUs were found in at least one soil compartment and one plant compartment. Putative Arthrobacter, Sporosarcina, Cladosporium and members of Proteobacteria and Actinobacteria were found across all the soil-plant continuums. Ascomycota, mainly including Didymellaceae, Pleosporaceae and Davidiellaceae were present across all the soil-plant continuums. Microbial communities in two regions of Jordan were similar to each other, but both of them were different from the Jornada LTER site of USA. SIMPER (similarity percentage) analysis of bacterial and fungal taxa for both soil and endophyte communities revealed that dissimilarities of two bacterial genera (Arthrobacter and Sporosarcina) and two fungal genera (Cladosporium and Alternaria) are very high, so they play key roles in the soil-plant continuums. A weighed Pearson correlation analysis for the specific bacterial OTUs in the soil-plant continuums only showed high similarity between the two regions of Jordan. However, fungal groups showed higher similarities among all regions. This research supports the hypothesis of continuity of certain bacterial and fungal communities across the soil-plant continuums, and also explores the influences of plant species and geographic specificity on diversity and distribution of bacteria and fungi.展开更多
Soil microbiomes play a crucial role in maintaining ecological functions and are of great importance for soil health.Some of them could bring benefits to plants for growth promotion.Despite numerous studies have focus...Soil microbiomes play a crucial role in maintaining ecological functions and are of great importance for soil health.Some of them could bring benefits to plants for growth promotion.Despite numerous studies have focused on specific beneficial bacteria and their interactions with soils and plants,we still lack a comprehensive understanding of beneficial communities in plant–soil continuums and their responses to agricultural activities.To address this gap,we carried out a microcosm experiment using 16S rRNA amplicon sequencing to explore the effects of organic fertilization on beneficial communities in plant–soil continuums and assess their potential multifunctionality.Our findings reveal that organic fertilization had a positive impact on the beneficial functionality of bacterial communities in plant–soil continuums.This improvement was primarily attributed to the optimized soil physicochemical conditions resulting from organic fertilization.Additionally,organic fertilization increased the complexity of bacterial co-occurrence networks in both soils and the endosphere.Keystone taxa in the endosphere undergone a shift of functions toward pathogen suppression as the result of organic fertilization.Furthermore,this study revealed that plants exhibited a preference for internalizing beneficial bacteria over other type of bacteria.We also provided new insights for evaluating the multifunctionality of microbiomes,and found that the functionality of beneficial communities in plant–soil continuums is enhanced by organic fertilization.All these findings suggested that organic fertilization can be an effective strategy for maintaining plant and soil health.展开更多
The results from investigations indicated that mercury pollution in terrestrial ecosystem was serious due to the anthropogenic mercury emission growing in Chongqing, China. The concentration of atmospheric mercury in...The results from investigations indicated that mercury pollution in terrestrial ecosystem was serious due to the anthropogenic mercury emission growing in Chongqing, China. The concentration of atmospheric mercury in Chongqing was 34.4±2.7 ng/m\+3 with the range of 9.2—101.5. The accumulation of mercury in surface soil was increasing with time. The mercury content of some agricultural products have exceeded the food health standard value, especially near the mercury emission sources. The mercury accumulation in soil plant system was affected by atmospheric mercury and a positive correlation between them was found. Volatilization of mercury was the most important processes with which soil mercury joined the global mercury recycling.展开更多
定量描述农田生态系统中土壤水分动态、碳氮循环过程和作物生长发育规律,对水氮资源高效利用、作物生产决策和环境保护具有十分重要的意义。该文在总结前人研究成果的基础上,引用了联合国粮食及农业组织的气象模块、荷兰的PS123作物模...定量描述农田生态系统中土壤水分动态、碳氮循环过程和作物生长发育规律,对水氮资源高效利用、作物生产决策和环境保护具有十分重要的意义。该文在总结前人研究成果的基础上,引用了联合国粮食及农业组织的气象模块、荷兰的PS123作物模型和丹麦的Daisy模型的碳氮循环模块;借鉴了RZWQM和Hydrus-1D的水分溶质运移模块的相关理论,并在其基础上进行了修改与完善,构建了土壤-作物-大气系统水热碳氮耦合模拟模型WHCNS(soil water heat carbon and nitrogen simulation)。该模型以天为步长,考虑了气象条件、作物生物学特性和田间管理驱动。土壤水分入渗和再分布过程分别采用Green-Ampt模型和Richards方程来描述。土壤氮素运移使用对流-弥散方程来描述,源汇项中考虑碳氮循环的各个过程(有机质矿化、生物固持、尿素水解、氨挥发、硝化、反硝化和作物吸收等),在根系吸水吸氮源汇项中引入了补偿性吸收机制。有机质模块完全来自Daisy模型,将有机质库划分为3个快库和3个慢库。利用改进的荷兰PS123模型实现了作物生长发育进程、干物质生产、干物质分配及作物产量的模拟,通过水氮胁迫校准因子来实现水氮限制下作物产量的模拟。最后应用华北地区(山东泰安)冬小麦-夏玉米轮作体系2 a的田间观测数据对该模型进行了校验。结果表明,剖面土壤水分和硝态氮浓度、叶面积指数、作物产量与实测值均吻合良好,模拟误差均在合理范围之内,特别是对产量的模拟较好,均方根误差为206-319 kg/hm^2,相关系数为0.90,模型效率值均大于0.75,一致性指数值均大于0.9。WHCNS模型能够较好地模拟土壤水分动态、氮素运移及去向、作物生长发育等过程,表明该模型适用于中国华北地区高度集约化的农田生产系统。展开更多
基金supported by the National Natural Science Foundation of China (Grant No.40275004)the State Key Laboratory of Atmosphere Physics and Chemistry,and the City University of Hong Kong(Grant No.8780046)the City University of Hong Kong Strategic Research(Grant No.7001038)
文摘This paper uses a Modified Soil-Plant-Atmosphere Scheme (MSPAS) to study the interaction between land surface and atmospheric boundary layer processes. The scheme is composed of two main parts: atmospheric boundary layer processes and land surface processes. Compared with SiB and BATS, which are famous for their detailed parameterizations of physical variables, this simplified model is more convenient and saves much more computation time. Though simple, the feasibility of the model is well proved in this paper. The numerical simulation results from MSPAS show good agreement with reality. The scheme is used to obtain reasonable simulations for diurnal variations of heat balance, potential temperature of boundary layer, and wind field, and spatial distributions of temperature, specific humidity, vertical velocity, turbulence kinetic energy, and turbulence exchange coefficient over desert and oasis. In addition, MSPAS is used to simulate the interaction between desert and oasis at night, and again it obtains reasonable results. This indicates that MSPAS can be used to study the interaction between land surface processes and the atmospheric boundary layer over various underlying surfaces and can be extended for regional climate and numerical weather prediction study.
基金the National Natural Science Foundation of China (Grant No. 40275004) the State Key Laboratory of Atmosphere Physics and Chemistry, and the City University of Hong Kong Grant 8780046 the City University of Hong Kong Strategic Research (Grant No.7001038).
文摘A series of sensitivity tests are performed to test the stability and sensibility of the Modified Soil-Plant-Atmosphere Scheme (MSPAS), which was wholly introduced in a previous paper. The numerical simulation results from the experiments show good agreement with physical reality. Besides, some of the results are illuminating. Together with the first paper, it is concluded that MSPAS is a simple but effective model, and it is practically valuable in the research work of desertification control and reforestation in China.
文摘Endophytes are hypothesized to be transferred across the soil-plant continuum, suggesting both the transfers of endophytes from environment to plant and from plant to soil. To verify this hypothesis and to assess the role of locality, we evaluated the similarity of microbial communities commonly found both in soils and endophytic communities in three arid regions, i.e. the Jornada LTER (Long Term Ecological Research) site in New Mexico, USA, and the research station of Jordan University of Science and Technology (JUST) and Khanasd research station in Badia region of Jordan. Rhizosphere and non-rhizosphere soils, leaves and seeds of Atriplex spp. were sampled. Diversity and distribution of bacteria and fungi across the soil-plant continuums were assessed by tag-encoded FLX amplicon pyrosequencing and sequence alignment. Of the total bacterial OTUs (operational taxonomic units), 0.17% in Khanasri research station, 0.16% in research station of JUST, and 0.42% in Jornada LTER site were commonly found across all the plant and soil compartments. The same was true for fungi in two regions, i.e. 1.56% in research station of JUST and 0.86% in Jornada LTER site. However, in Khanasri research station, 12.08% of total fungi OTUs were found in at least one soil compartment and one plant compartment. Putative Arthrobacter, Sporosarcina, Cladosporium and members of Proteobacteria and Actinobacteria were found across all the soil-plant continuums. Ascomycota, mainly including Didymellaceae, Pleosporaceae and Davidiellaceae were present across all the soil-plant continuums. Microbial communities in two regions of Jordan were similar to each other, but both of them were different from the Jornada LTER site of USA. SIMPER (similarity percentage) analysis of bacterial and fungal taxa for both soil and endophyte communities revealed that dissimilarities of two bacterial genera (Arthrobacter and Sporosarcina) and two fungal genera (Cladosporium and Alternaria) are very high, so they play key roles in the soil-plant continuums. A weighed Pearson correlation analysis for the specific bacterial OTUs in the soil-plant continuums only showed high similarity between the two regions of Jordan. However, fungal groups showed higher similarities among all regions. This research supports the hypothesis of continuity of certain bacterial and fungal communities across the soil-plant continuums, and also explores the influences of plant species and geographic specificity on diversity and distribution of bacteria and fungi.
基金supported by the State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products(No.2021DG700024-KF202307).
文摘Soil microbiomes play a crucial role in maintaining ecological functions and are of great importance for soil health.Some of them could bring benefits to plants for growth promotion.Despite numerous studies have focused on specific beneficial bacteria and their interactions with soils and plants,we still lack a comprehensive understanding of beneficial communities in plant–soil continuums and their responses to agricultural activities.To address this gap,we carried out a microcosm experiment using 16S rRNA amplicon sequencing to explore the effects of organic fertilization on beneficial communities in plant–soil continuums and assess their potential multifunctionality.Our findings reveal that organic fertilization had a positive impact on the beneficial functionality of bacterial communities in plant–soil continuums.This improvement was primarily attributed to the optimized soil physicochemical conditions resulting from organic fertilization.Additionally,organic fertilization increased the complexity of bacterial co-occurrence networks in both soils and the endosphere.Keystone taxa in the endosphere undergone a shift of functions toward pathogen suppression as the result of organic fertilization.Furthermore,this study revealed that plants exhibited a preference for internalizing beneficial bacteria over other type of bacteria.We also provided new insights for evaluating the multifunctionality of microbiomes,and found that the functionality of beneficial communities in plant–soil continuums is enhanced by organic fertilization.All these findings suggested that organic fertilization can be an effective strategy for maintaining plant and soil health.
文摘The results from investigations indicated that mercury pollution in terrestrial ecosystem was serious due to the anthropogenic mercury emission growing in Chongqing, China. The concentration of atmospheric mercury in Chongqing was 34.4±2.7 ng/m\+3 with the range of 9.2—101.5. The accumulation of mercury in surface soil was increasing with time. The mercury content of some agricultural products have exceeded the food health standard value, especially near the mercury emission sources. The mercury accumulation in soil plant system was affected by atmospheric mercury and a positive correlation between them was found. Volatilization of mercury was the most important processes with which soil mercury joined the global mercury recycling.
文摘定量描述农田生态系统中土壤水分动态、碳氮循环过程和作物生长发育规律,对水氮资源高效利用、作物生产决策和环境保护具有十分重要的意义。该文在总结前人研究成果的基础上,引用了联合国粮食及农业组织的气象模块、荷兰的PS123作物模型和丹麦的Daisy模型的碳氮循环模块;借鉴了RZWQM和Hydrus-1D的水分溶质运移模块的相关理论,并在其基础上进行了修改与完善,构建了土壤-作物-大气系统水热碳氮耦合模拟模型WHCNS(soil water heat carbon and nitrogen simulation)。该模型以天为步长,考虑了气象条件、作物生物学特性和田间管理驱动。土壤水分入渗和再分布过程分别采用Green-Ampt模型和Richards方程来描述。土壤氮素运移使用对流-弥散方程来描述,源汇项中考虑碳氮循环的各个过程(有机质矿化、生物固持、尿素水解、氨挥发、硝化、反硝化和作物吸收等),在根系吸水吸氮源汇项中引入了补偿性吸收机制。有机质模块完全来自Daisy模型,将有机质库划分为3个快库和3个慢库。利用改进的荷兰PS123模型实现了作物生长发育进程、干物质生产、干物质分配及作物产量的模拟,通过水氮胁迫校准因子来实现水氮限制下作物产量的模拟。最后应用华北地区(山东泰安)冬小麦-夏玉米轮作体系2 a的田间观测数据对该模型进行了校验。结果表明,剖面土壤水分和硝态氮浓度、叶面积指数、作物产量与实测值均吻合良好,模拟误差均在合理范围之内,特别是对产量的模拟较好,均方根误差为206-319 kg/hm^2,相关系数为0.90,模型效率值均大于0.75,一致性指数值均大于0.9。WHCNS模型能够较好地模拟土壤水分动态、氮素运移及去向、作物生长发育等过程,表明该模型适用于中国华北地区高度集约化的农田生产系统。