The root-knot nematode Meloidogyne graminicola is considered one of the most devastating pests in rice-producing areas,and nematicides are neither ecofriendly nor cost effective.More acceptable biological agents are r...The root-knot nematode Meloidogyne graminicola is considered one of the most devastating pests in rice-producing areas,and nematicides are neither ecofriendly nor cost effective.More acceptable biological agents are required for controlling this destructive pathogen.In this study,the biocontrol potential of Aspergillus welwitschiae AW2017 was investigated in laboratory and greenhouse experiments.The in vitro ovicidal and larvicidal activities of A.welwitschiae metabolites were tested on M.graminicola in laboratory experiments.The effect of A.welwitschiae on the attraction of M.graminicola to rice and the infection of rice by M.graminicola was evaluated in a greenhouse.The bioagent AW2017 displayed good nematicidal potential via its ovicidal and larvicidal action.The best larvicidal activity was observed at a concentration of 5×AW2017,which caused an 86.2%mortality rate at 48 h post inoculation.The highest ovicidal activity was recorded at a concentration of 5×AW2017,which resulted in an approximately 47.3%reduction in egg hatching after 8 d compared to the control.Under greenhouse conditions,the application of A.welwitschiae significantly reduced the root galls and nematodes in rice roots compared to the control.At a concentration of 5×AW2017,juveniles and root galls in rice roots at 14 d post inoculation(dpi)were reduced by 24.5 and 40.5%,respectively.In addition,the attraction of M.graminicola to rice roots was significantly decreased in the AW2017 treatment,and the development of nematodes in the AW2017-treated plants was slightly delayed compared with that in the PDB-treated control plants.The results indicate that A.welwitschiae is a potential biological control agent against M.graminicola in rice.展开更多
Climate change is threatening natural ecosystems in the Earth, and arid regions of southern Africa are particularly exposed to further drying. Welwitschia mirabilis Hook. (Welwitschiaceae) is an unusual gymnosperm t...Climate change is threatening natural ecosystems in the Earth, and arid regions of southern Africa are particularly exposed to further drying. Welwitschia mirabilis Hook. (Welwitschiaceae) is an unusual gymnosperm tree that is recognized as an icon of the Namib Desert, southern Africa. Many aspects of its biology were investigated in the past, with a special emphasis for its physiology and adaptations, but nothing is known about its potential sensitivity to current climate changes. In this study, we adopted an approach based on distribution data for W. mirabilis and ecological niche models for clarifying the species-climate interactions and for predicting the potential impacts of climate change on W. mirabilis populations in three well-separated sub-ranges (northern, southern and central) in northwestern Namibia, southern Africa. We evidenced that the populations occurring in the northern sub-range have peculiar climatic exigencies compared with those in the central and southern sub-ranges and are particularly exposed to the impact of climate change, which will consist of a substantial increase in temperature across the region. These impacts could be represented by demographic changes that should be detected and monitored detailedly to plan efficient measures for managing populations of this important species on the long-term scale.展开更多
Comparative genomics among gymnosperms suggested extensive loss of mitochondrial RNA editing sites from Welwitschia mirabilis based on predictive analysis. However, empirical or transcriptome data to confirm this mass...Comparative genomics among gymnosperms suggested extensive loss of mitochondrial RNA editing sites from Welwitschia mirabilis based on predictive analysis. However, empirical or transcriptome data to confirm this massive loss event are lacking,and the potential mechanisms of RNA site loss are unclear. By comparing genomic sequences with transcriptomic and reversetranscription PCR sequencing data, we performed a comprehensive analysis of the pattern of RNA editing in the mitochondrial and plastid genomes(mitogenome and plastome, respectively) of W. mirabilis and a second gymnosperm, Ginkgo biloba. For W.mirabilis, we found only 99 editing sites located in 13 protein-coding genes in the mitogenome and a complete loss of RNA editing from the plastome. The few genes having high editing frequency in the Welwitschia mitogenome showed a strong negative correlation with gene expression level. Comparative analyses with G. biloba, containing 1,405 mitochondrial and 345 plastid editing sites, revealed that the editing loss from W. mirabilis is mainly due to the substitution of editable cytidines to thymidines at the genomic level, which could be caused by retroprocessing. Our result is the first study to uncover massive editing loss from both the mitogenome and plastome in a single genus. Furthermore, our results suggest that gene expression level and retroprocessing both contributed to the evolution of RNA editing in plant organellar genomes.展开更多
基金financially supported by grants from the National Key Research and Development Program (2018YFD0201202 & 2017YFD0201102)the National Natural Science Foundation of China (31571986)
文摘The root-knot nematode Meloidogyne graminicola is considered one of the most devastating pests in rice-producing areas,and nematicides are neither ecofriendly nor cost effective.More acceptable biological agents are required for controlling this destructive pathogen.In this study,the biocontrol potential of Aspergillus welwitschiae AW2017 was investigated in laboratory and greenhouse experiments.The in vitro ovicidal and larvicidal activities of A.welwitschiae metabolites were tested on M.graminicola in laboratory experiments.The effect of A.welwitschiae on the attraction of M.graminicola to rice and the infection of rice by M.graminicola was evaluated in a greenhouse.The bioagent AW2017 displayed good nematicidal potential via its ovicidal and larvicidal action.The best larvicidal activity was observed at a concentration of 5×AW2017,which caused an 86.2%mortality rate at 48 h post inoculation.The highest ovicidal activity was recorded at a concentration of 5×AW2017,which resulted in an approximately 47.3%reduction in egg hatching after 8 d compared to the control.Under greenhouse conditions,the application of A.welwitschiae significantly reduced the root galls and nematodes in rice roots compared to the control.At a concentration of 5×AW2017,juveniles and root galls in rice roots at 14 d post inoculation(dpi)were reduced by 24.5 and 40.5%,respectively.In addition,the attraction of M.graminicola to rice roots was significantly decreased in the AW2017 treatment,and the development of nematodes in the AW2017-treated plants was slightly delayed compared with that in the PDB-treated control plants.The results indicate that A.welwitschiae is a potential biological control agent against M.graminicola in rice.
基金supported by the LifeWatch-ITA European Research Infrastructure on Biodiversity and the Project LIFE+Man For C.BD.(LIFE09 ENV/IT/000078)
文摘Climate change is threatening natural ecosystems in the Earth, and arid regions of southern Africa are particularly exposed to further drying. Welwitschia mirabilis Hook. (Welwitschiaceae) is an unusual gymnosperm tree that is recognized as an icon of the Namib Desert, southern Africa. Many aspects of its biology were investigated in the past, with a special emphasis for its physiology and adaptations, but nothing is known about its potential sensitivity to current climate changes. In this study, we adopted an approach based on distribution data for W. mirabilis and ecological niche models for clarifying the species-climate interactions and for predicting the potential impacts of climate change on W. mirabilis populations in three well-separated sub-ranges (northern, southern and central) in northwestern Namibia, southern Africa. We evidenced that the populations occurring in the northern sub-range have peculiar climatic exigencies compared with those in the central and southern sub-ranges and are particularly exposed to the impact of climate change, which will consist of a substantial increase in temperature across the region. These impacts could be represented by demographic changes that should be detected and monitored detailedly to plan efficient measures for managing populations of this important species on the long-term scale.
基金supported by the National Natural Science Foundation of China(31801051to WF)the Large-scale Scientific Facilities of the Chinese Academy of Sciences(2017-LSF-GBOWS-02)CAS Pioneer Hundred Talents Program(to AZ)
文摘Comparative genomics among gymnosperms suggested extensive loss of mitochondrial RNA editing sites from Welwitschia mirabilis based on predictive analysis. However, empirical or transcriptome data to confirm this massive loss event are lacking,and the potential mechanisms of RNA site loss are unclear. By comparing genomic sequences with transcriptomic and reversetranscription PCR sequencing data, we performed a comprehensive analysis of the pattern of RNA editing in the mitochondrial and plastid genomes(mitogenome and plastome, respectively) of W. mirabilis and a second gymnosperm, Ginkgo biloba. For W.mirabilis, we found only 99 editing sites located in 13 protein-coding genes in the mitogenome and a complete loss of RNA editing from the plastome. The few genes having high editing frequency in the Welwitschia mitogenome showed a strong negative correlation with gene expression level. Comparative analyses with G. biloba, containing 1,405 mitochondrial and 345 plastid editing sites, revealed that the editing loss from W. mirabilis is mainly due to the substitution of editable cytidines to thymidines at the genomic level, which could be caused by retroprocessing. Our result is the first study to uncover massive editing loss from both the mitogenome and plastome in a single genus. Furthermore, our results suggest that gene expression level and retroprocessing both contributed to the evolution of RNA editing in plant organellar genomes.