From the view of methodology for genetic improvement ofJaponicacytoplasmic male sterile(CMS) lines,we introduced the breeding process of the dwarf-abortive type(DA type)JaponicaCMS line Chunjiang 95A with wide compati...From the view of methodology for genetic improvement ofJaponicacytoplasmic male sterile(CMS) lines,we introduced the breeding process of the dwarf-abortive type(DA type)JaponicaCMS line Chunjiang 95A with wide compatibility,and further investigated the biological characteristics of the DA type Chunjiang 95A and its isonuclear alloplasmic CMS line Dian-I type Chunjiang 95A.The results show that DA type Chunjiang 95A is a japonicalinous CMS line and mainly typical abortive,which is better in fertility stability than stained abortive typeJaponica CMS lines.The DA type Chunjiang 95A is featured with high stigma exsertion,good flowering habit,high outcrossing rate and wide compatibility.Its recoverability differs from stained abortive typeJaponicaCMS lines.Moreover,we discussed genetic improvement of the typical abortive type JaponicaCMS lines and the application prospects of heterosis.展开更多
[Objective] To breed and utilize the japonicalinous cytoplasmic male sterile (CMS) line Chunjiang 19A with wide compatibility and high outcrossing rate. [Method] Cbunjiang 16A was used as the female parent to cross ...[Objective] To breed and utilize the japonicalinous cytoplasmic male sterile (CMS) line Chunjiang 19A with wide compatibility and high outcrossing rate. [Method] Cbunjiang 16A was used as the female parent to cross with Indica-Japonica crossing material B125, which was used as male parent. Backcross breeding was contin- ued for consecutive generations to breed the CMS lines with wide compatibility and high outcrossing rate. [Result] Chunjiang 19A is a late medium Japonica CMS line with good fertility stability. The proportion of sterile plants and pollen abortion rates are 100% and the Cheng's index is 14. It is the japonicalinous CMS line with early flowering, partial stigma exsertion, high outcrossing rate, wide compatibility, high re- sistance to stripe disease and good combining ability. The hybrid rice combinations originated from Chunjiang 19A have strong tUlering ability, dominant heterosis, high resistance to stripe disease, great yield potential and good color change at mature stage. [Conclusion] The successful breeding of Chunjiang 19A laid good foundation for the breeding of Japonica hybrid rice and Indica-Japonica hybrid rice combinations with high seed production and dominant heterosis, showing a promising application prospect.展开更多
The compound traditional Chinese medicine Qingkailing, which is an ingredient used to treat cerebral ischemia, has been limited to studies concerning single genes or single pathways. Interactions and pharmacological m...The compound traditional Chinese medicine Qingkailing, which is an ingredient used to treat cerebral ischemia, has been limited to studies concerning single genes or single pathways. Interactions and pharmacological mechanisms of the compound ingredients (baicalin and jasminoidin) remain poorly understood. In the present study, baicalin and jasminoidin, as well as the combination, were used to separately treat mouse models of cerebral ischemia, cDNA microarray analyses of 374 cerebral ischemia-related genes were utilized to determine changes in gene-expression profiles. Arraytrack 3.40 and Ingenuity Pathway Analysis (IPA) databases were utilized to analyze changes in gene molecular functions and network path functions. Baicalin or jasminoidin alone effectively reduced infarct area, and the combination resulted in significantly better outcomes. IPA showed inhibited cell apoptosis in the baicalin group and Ca^2+ channel regulation in the jasminoidin group. The combination of baicalin and jasminoidin activated HTR3A and F5 expression, regulated Ca^2+ channels, activated kappa light polypeptide gene enhancer inhibitor IKBKG in B cells to control IkB kinase/nuclear factor-kB cascade, suppressed activation of inflammatory cytokine interleukin-6 receptors and activated transduction of guanine-nucleotide- binding protein (G protein) signal. Results suggested that the combination of baicalin and jasminoidin resulted in similar molecular mechanisms to baicalin and jasminoidin alone. However, novel pharmacological actions of compatibility were detected, demonstrating significant protection against cerebral ischemia.展开更多
The possibility of gene flow between two varieties of transgenic rice with bar gene (Y0003 and 99-t) (male) and barnyard grass(Echinochloa crusgalli var. mitis ) (female) was studied by means of reproductive biology. ...The possibility of gene flow between two varieties of transgenic rice with bar gene (Y0003 and 99-t) (male) and barnyard grass(Echinochloa crusgalli var. mitis ) (female) was studied by means of reproductive biology. The germination and growth of rice pollen grains on barnyard grass stigmas at 30 min, and 1-4 h after crossing by hand were observed with an optical microscope. The results were compared with the germination and growth of barnyard grass pollen grains at the corresponding time after self-pollination. The results showed that germination and growth of the pollen grains of the two varieties were similar on barnyard grass stigmas, but differed significantly from self-pollination of barnyard grass. Pollen grains germinated and pollen tubes penetrated stigmas normally, and the number of pollen grains being condensing or releasing their inclusions or having released them increased with the time after self-pollination. Pollen grains of transgenic rice on the stigmas of barnyard grass couldn't germinate or grow normally after crossing, neither could they penetrate the stigmas of barnyard grass. Therefore, it could be concluded that the sexual incompatibility between transgenic rice with bar gene and barnyard grass is due to the rice pollen being unable to penetrate the stigma of barnyard grass. Further proof of incompatibility lies in the fact that the emasculated barnyard grass pollinated with the rice pollen grains could not seed.展开更多
Weeds and insect pests are two important biotic stresses resulting in yield loss in rice, and wide compatibility is the essential characteristic of breeding inter-subspecific hybrid rice. This study focused on glyphos...Weeds and insect pests are two important biotic stresses resulting in yield loss in rice, and wide compatibility is the essential characteristic of breeding inter-subspecific hybrid rice. This study focused on glyphosate resistance, lepidopteran resistance and wide compatibility as well as identification of molecular and some agronomic characteristics of transgenic male sterile line E1 C4008 S. The results indicated that glyphosate resistance gene Epsps^# and lepidopteran resistance gene Cry1 ca^# were transferred into japonica wide compatibility male sterile line 4008 S by Agrobacterium-mediated method, and four independent transformation events named E1 C4008 S-1, E1 C4008 S-2, E1 C4008 S-3 and E1 C4008 S-4 were obtained, in which E1 C4008 S-3 and E1 C4008 S-4 were of single copy insertion. The EPSPS protein contents of E1 C4008 S-3 and E1 C4008 S-4 in different organs were significantly different both in descending order of leaf > stem > root, and ranged from 300.58 to 1410.69 μg/g at the tillering stage. The glyphosate tolerable concentration(dosage) of E1 C4008 S-3 and E1 C4008 S-4 reached at least 16 g/L(54.42 kg/hm^2), and the seeds of E1 C4008 S-4 can germinate normally on the medium containing 1 g/L glyphosate. The CRY1 C protein contents of E1 C4008 S-3 and E1 C4008 S-4 in different organs were significantly different both in descending order of leaf > stem > root, and ranged from 0.62 to 2.43 μg/g at the tillering stage. The larvae mortalities of rice leaf rollers fed on leaves of E1 C4008 S-3 and E1 C4008 S-4 for 5 d were 95.35% and 97.77%, respectively, while the average mortalities of silkworms fed with protein extracts from leaves of E1 C4008 S-3 and E1 C4008 S-4 reached 94.55% and 83.64%, respectively. The results suggested that wide compatibility and evaluated agronomic traits of E1 C4008 S-4 were not significantly changed by insertion of the exogenous genes. Overall, a novel male sterile germplasm with glyphosate resistance, lepidopteran resistance and wide compatibility was verified to be developed in rice.展开更多
IR36 has been used as an indica tester in screeningWCVs.However,artificial emasculation is not on-ly a time consuming work,but also may producefalse hybrids due to incomplete emasculation,andmay injure stigmata and ov...IR36 has been used as an indica tester in screeningWCVs.However,artificial emasculation is not on-ly a time consuming work,but also may producefalse hybrids due to incomplete emasculation,andmay injure stigmata and ovary which will result ina decrease of spikelet fertility.We studied the possi-展开更多
Rice selection 02428 and T984(Oryzasativa L.ssp.japonica)were germplasmresources with wide compatibility.Mature embryos of rice cultured on Lin-smaier and Skoog medium with 2.5 mg/l2,4-D,1.0 mg/l thiamine-HCL,3%(W/V)s...Rice selection 02428 and T984(Oryzasativa L.ssp.japonica)were germplasmresources with wide compatibility.Mature embryos of rice cultured on Lin-smaier and Skoog medium with 2.5 mg/l2,4-D,1.0 mg/l thiamine-HCL,3%(W/V)sucrose and 0.7%(W/V)agar,pH 5.8(LS2.5)were used for callus initiation.Cultures were展开更多
The introduction of genetically modified(GM) soybean into farming systems raises great concern that transgenes from GM soybean may flow to endemic wild soybean via pollen. This may increase the weediness of transgenic...The introduction of genetically modified(GM) soybean into farming systems raises great concern that transgenes from GM soybean may flow to endemic wild soybean via pollen. This may increase the weediness of transgenic soybean by increasing the fitness of hybrids under certain conditions and threaten the genetic diversity of wild soybean populations. Although pollen-mediated gene flow between GM crops and wild relatives is dependent on many factors, the sexual compatibility(SC)determined by their genetic backgrounds is the conclusive factor. The considerable genetic variation among wild soybean populations may cause compatibility differences between different wild and cultivated soybeans. Thus, an evaluation of the SC between transgenic soybean and different wild soybeans is essential for assessing the environmental consequences of cultivated soybean–wild soybean transgene flow. The podding and seed sets were assessed after artificial hybridization using transgenic glyphosate-resistant soybean as the paternal parent and 18 wild soybean populations as the maternal parents. Then, the average number of filled seeds produced in 200 flowers(AFS) was calculated for each wild soybean under natural self-pollination as well as under artificial crossing with transgenic soybean. Finally, the index of cross-SC was calculated(ICSC) as the ratio of the AFS of wild soybean artificially crossed with transgenic soybean and the AFS of naturally self-pollinated wild soybean. The results demonstrated that after self-pollination and crossing with transgenic soybean, the average podding rates of 18 wild soybean populations ranged within 96.50–99.50% and 4.92–18.03%, and the average filled seed numbers per pod varied from 1.70 to 2.69 and 0.20 to 0.48, respectively. The results showed that approximately 89% of wild soybeans displayed either medium or higher than medium SC with transgenic soybean(ICSC>1.0%). This implied the high possibility of gene flow via pollen from transgenic soybean to wild soybean.展开更多
Hexanol is a major compound contributing to the off-flavors(the bean-like odor)of soybean derived soymilk.The most effective way to reduce the off-flavors of soymilk is the screening and utilization of soybean cultiva...Hexanol is a major compound contributing to the off-flavors(the bean-like odor)of soybean derived soymilk.The most effective way to reduce the off-flavors of soymilk is the screening and utilization of soybean cultivars with improved hexanol content.However,no genome-wide genetic analysis for this particular trait has been conducted to date.The objective of the present study was to dissect the genetic basis of hexanol content in soybean seed through genome-wide association analysis(GWAS).A total of 105 soybean accessions were analyzed for hexanol content in a three-year experiments and genotyped by sequencing using the specific locus amplified fragment sequencing(SLAF-seq)approach.A total of 25 724 single nucleotide polymorphisms(SNPs)were obtained with minor allele frequencies(MAF)>5%.GWAS showed that 25 quantitative trait nucleotides(QTNs)were significantly associated with the hexanol concentration in soybean seed.These identified QTNs distributed on different genomic regions of the 15 chromosomes.A total of 91 genes were predicted as candidate genes underlying the seed hexanol level and six candidates were predicted possibly underlying the seed hexanol by gene based association.In this study,GWAS has been proven to be an effective way to dissect the genetic basis of the hexanol concentration in multiple genetic backgrounds.The identified beneficial alleles and candidate genes might be valuable for the improvement of marker-assisted breeding efficiency for low hexanol level and help to explore possible molecular mechanisms underlying hexanol content in soybean seed.展开更多
The mevalonate diphosphate deearboxylase (MVD) is an essential enzyme in mevalonate (MVA) pathway that catalyzes the irreversible Mg2+ -ATP de- pendent decarboxylation of 6-carben compound mevalonate-5-diphospha...The mevalonate diphosphate deearboxylase (MVD) is an essential enzyme in mevalonate (MVA) pathway that catalyzes the irreversible Mg2+ -ATP de- pendent decarboxylation of 6-carben compound mevalonate-5-diphosphate (MVAPP) into 5-carbon isopentenyl diphosphate ( IPP), the building block of sterol and isoprenoid biosynthesis. In this study, based on the published geanme sequences and ESTs, a genome-wide search was carried out for the first time to identify MVD gene family in four genome-sequenced Euphorbiaceae plants, i.e. castor bean ( Ricinus communis), physic nut ( Jatropha curcas), cassava (Manihot esculenta) and rubber tree (Hevea brasiliensis), and to analyze the gene structure and phylogenetic characteristics. According to the experimental results, 1, 1,2 and 2 MVD genes, which all contain 9 introns, were identh'ied from castor bean, physic nut, cassava and rubber tree, respectively. Homology analysis indicates that MVD genes are widely distributed in eukaryotes, some archaea and eubacteria, which suggests an early origin of this gerte family. Although MVD genes were identified in most green plants, no homologous genes were found in unicellular green algae. In most genome-sequenced plants including castor bean and physic nut, a single copy of MVD gene was found; however, in cassava and rubber tree, two copies were identified just like that in moss, maize, Arabidopsis and poplar. "In castor bean, digital expression profiling suggests that in five examined tissues, i.e. leaf, flower, II/III stage endosperm, V/VI stage endosperm and seed, RcPMK was expressed strongly in flower and II/III stage endosperm, moderately in V/VI stage endosperm and leaf, and weakly in seed.展开更多
Pancreatic cancer is a fatal malignancy with an increasing incidence in Shanghai, China. A genomewide association study(GWAS) and other work have shown that ABO alleles are associated with pancreatic cancer risk. We c...Pancreatic cancer is a fatal malignancy with an increasing incidence in Shanghai, China. A genomewide association study(GWAS) and other work have shown that ABO alleles are associated with pancreatic cancer risk. We conducted a population-based case-control study involving 256 patients with pathologically confirmed pancreatic ductal adenocarcinoma(PDAC) and 548 healthy controls in Shanghai, China, to assess the relationships between GWAS-identified ABO alleles and risk of PDAC. Carriers of the C allele of rs505922 had an increased cancer risk [adjusted odds ratio(OR) = 1.42, 95% confidence interval(CI): 1.02-1.98] compared to TT carriers. The T alleles of rs495828 and rs657152 were also significantly associated with an elevated cancer risk(adjusted OR = 1.58, 95% CI: 1.17-2.14; adjusted OR = 1.51, 95% CI: 1.09-2.10). The rs630014 variant was not associated with risk. We did not find any significant gene-environment interaction with cancer risk using a multifactor dimensionality reduction(MDR) method. Haplotype analysis also showed that the haplotype CTTC was associated with an increased risk of PDAC(adjusted OR = 1.46, 95% CI: 1.12-1.91) compared with haplotype TGGT. GWAS-identified ABO variants are thus also associated with risk of PDAC in the Chinese population.展开更多
Red blood cells play an essential role in the immune system.Moreover,red blood cell count(RBC) is an important clinical indicator of various diseases,including anemia,type 2 diabetes and the metabolic syndrome.Thus,it...Red blood cells play an essential role in the immune system.Moreover,red blood cell count(RBC) is an important clinical indicator of various diseases,including anemia,type 2 diabetes and the metabolic syndrome.Thus,it is necessary to reveal the genetic mechanism of RBC for animal disease resistance breeding.However,quite a few studies had focused on porcine RBC,especially at different stages.Thus,studies on porcine RBC at different stages are needed for disease resistant breeding.In this study,the porcine RBC of 20-,33-,and 80-day old were measured,and genetic parameter estimation and genome-wide association study(GWAS) were both performed.As a result,the heritability was about 0.6 at the early stages,much higher than that at 80 days.Nine novel genome wide significant single nucleotide polymorphisms(SNPs),located at Sus scrofa chromosome(SSC)3,4,8,9,10 and 15,respectively,were identified.Further,TGFβ2,TMCC2 and PPP1 R15 B genes were identified as important candidate genes of porcine red blood cell count.So different SNPs and candidate genes were found significantly associated with porcine RBC at different stages,suggesting that different genes might play key roles on porcine RBC at different stages.Overall,new evidences were offered in this study for the genetic bases of animal RBC,and that the SNPs and candidate genes would be useful for disease resistant breeding of pig.展开更多
Since the middle of 1980’s, wide compatibility(WC) rice lines have been screened by ricebreeders in China and applied in hybrid ricebreeding program. Several WC lines such asPecos, T984, Lunhui 422, and 02428 withide...Since the middle of 1980’s, wide compatibility(WC) rice lines have been screened by ricebreeders in China and applied in hybrid ricebreeding program. Several WC lines such asPecos, T984, Lunhui 422, and 02428 withideal agronomic characters were identified. Weincorporated the WC gene into restorer linesby crossing these japonica WC lines with ob-tained indica lines. Some WC restorer lineswith indica-japonica medium type were ob-tained and their application value in intersub-specific hybrid rice breeding were evaluated. 1. Effect of crossing methods on selectionefficiencies of WC restorer lines展开更多
玉米籽粒氮含量与品质紧密相关,其遗传机制的解析对玉米品质育种具有重要意义。本研究以252份玉米自交系为关联群体,利用贝叶斯信息与连锁不平衡迭代嵌套式模型(BLINK,bayesian-informationandlinkage-disequilibrium iteratively neste...玉米籽粒氮含量与品质紧密相关,其遗传机制的解析对玉米品质育种具有重要意义。本研究以252份玉米自交系为关联群体,利用贝叶斯信息与连锁不平衡迭代嵌套式模型(BLINK,bayesian-informationandlinkage-disequilibrium iteratively nested keyway)、固定随机循环概率模型(FarmCPU,fixed and random model circulating probability unification)、一般线性模型(GLM,general linear model)、混合线性模型(MLM,mixed linear model)、多位点混合线性模型(MLMM,multiple loci mixed model)和逐步排它性混合线性模型(SUPER,settlement of MLM under progressively exclusive relationship)等方法分别对其籽粒氮含量进行全基因组关联分析。共鉴定到13个与籽粒氮含量显著关联的SNP(P<3.64E-07)。BLINK、FarmCPU、GLM、MLM、MLMM和SUPER方法分别检测到6个、3个、7个、4个、2个和4个SNP位点。其中,S3_8879213在5种方法中均能检测到,S9_146173702在4种方法中均能检测到,S5_114774030和S7_182217338在3种方法中均能检测到,S1_10906326和S1_177528813在2种方法中均能检测到。共挖掘25个相关候选基因,其中Zm00001eb275080和Zm00001eb330700可能是影响玉米籽粒氮含量的重要候选基因。展开更多
基金Supported by Key Research Project of Zhejiang Province(2008C22074)0406 Program of Zhejiang Province+2 种基金Fund for theConversion of Agricultural Science and Technology Achievement inZhejiang ProvinceBasic Operation Fund of China National Rice Re-search Institutethe Program of Breeding and Experimental Dem-onstration of Super Hybrid Rice in China from Ministry of Agriculture.
文摘From the view of methodology for genetic improvement ofJaponicacytoplasmic male sterile(CMS) lines,we introduced the breeding process of the dwarf-abortive type(DA type)JaponicaCMS line Chunjiang 95A with wide compatibility,and further investigated the biological characteristics of the DA type Chunjiang 95A and its isonuclear alloplasmic CMS line Dian-I type Chunjiang 95A.The results show that DA type Chunjiang 95A is a japonicalinous CMS line and mainly typical abortive,which is better in fertility stability than stained abortive typeJaponica CMS lines.The DA type Chunjiang 95A is featured with high stigma exsertion,good flowering habit,high outcrossing rate and wide compatibility.Its recoverability differs from stained abortive typeJaponicaCMS lines.Moreover,we discussed genetic improvement of the typical abortive type JaponicaCMS lines and the application prospects of heterosis.
基金Supported by the National High Technology Research and Development Program ofChina (863 Program) (2010AA101301)the Program of Breeding and Experimental Demonstration of Super Hybrid Rice in China from Ministry of Agriculture+1 种基金the 0406 Program of Zhejiang Provincethe Fundamental Research Fund of China National RiceResearch Institute (2009RG001-5)~~
文摘[Objective] To breed and utilize the japonicalinous cytoplasmic male sterile (CMS) line Chunjiang 19A with wide compatibility and high outcrossing rate. [Method] Cbunjiang 16A was used as the female parent to cross with Indica-Japonica crossing material B125, which was used as male parent. Backcross breeding was contin- ued for consecutive generations to breed the CMS lines with wide compatibility and high outcrossing rate. [Result] Chunjiang 19A is a late medium Japonica CMS line with good fertility stability. The proportion of sterile plants and pollen abortion rates are 100% and the Cheng's index is 14. It is the japonicalinous CMS line with early flowering, partial stigma exsertion, high outcrossing rate, wide compatibility, high re- sistance to stripe disease and good combining ability. The hybrid rice combinations originated from Chunjiang 19A have strong tUlering ability, dominant heterosis, high resistance to stripe disease, great yield potential and good color change at mature stage. [Conclusion] The successful breeding of Chunjiang 19A laid good foundation for the breeding of Japonica hybrid rice and Indica-Japonica hybrid rice combinations with high seed production and dominant heterosis, showing a promising application prospect.
基金the Postdoctoral Science Foundation of China,No.20090450553
文摘The compound traditional Chinese medicine Qingkailing, which is an ingredient used to treat cerebral ischemia, has been limited to studies concerning single genes or single pathways. Interactions and pharmacological mechanisms of the compound ingredients (baicalin and jasminoidin) remain poorly understood. In the present study, baicalin and jasminoidin, as well as the combination, were used to separately treat mouse models of cerebral ischemia, cDNA microarray analyses of 374 cerebral ischemia-related genes were utilized to determine changes in gene-expression profiles. Arraytrack 3.40 and Ingenuity Pathway Analysis (IPA) databases were utilized to analyze changes in gene molecular functions and network path functions. Baicalin or jasminoidin alone effectively reduced infarct area, and the combination resulted in significantly better outcomes. IPA showed inhibited cell apoptosis in the baicalin group and Ca^2+ channel regulation in the jasminoidin group. The combination of baicalin and jasminoidin activated HTR3A and F5 expression, regulated Ca^2+ channels, activated kappa light polypeptide gene enhancer inhibitor IKBKG in B cells to control IkB kinase/nuclear factor-kB cascade, suppressed activation of inflammatory cytokine interleukin-6 receptors and activated transduction of guanine-nucleotide- binding protein (G protein) signal. Results suggested that the combination of baicalin and jasminoidin resulted in similar molecular mechanisms to baicalin and jasminoidin alone. However, novel pharmacological actions of compatibility were detected, demonstrating significant protection against cerebral ischemia.
基金the Ministry ofScience and Technology,P.R.ChinaEvaluation of Safety of Transgenic Crops(E200102).
文摘The possibility of gene flow between two varieties of transgenic rice with bar gene (Y0003 and 99-t) (male) and barnyard grass(Echinochloa crusgalli var. mitis ) (female) was studied by means of reproductive biology. The germination and growth of rice pollen grains on barnyard grass stigmas at 30 min, and 1-4 h after crossing by hand were observed with an optical microscope. The results were compared with the germination and growth of barnyard grass pollen grains at the corresponding time after self-pollination. The results showed that germination and growth of the pollen grains of the two varieties were similar on barnyard grass stigmas, but differed significantly from self-pollination of barnyard grass. Pollen grains germinated and pollen tubes penetrated stigmas normally, and the number of pollen grains being condensing or releasing their inclusions or having released them increased with the time after self-pollination. Pollen grains of transgenic rice on the stigmas of barnyard grass couldn't germinate or grow normally after crossing, neither could they penetrate the stigmas of barnyard grass. Therefore, it could be concluded that the sexual incompatibility between transgenic rice with bar gene and barnyard grass is due to the rice pollen being unable to penetrate the stigma of barnyard grass. Further proof of incompatibility lies in the fact that the emasculated barnyard grass pollinated with the rice pollen grains could not seed.
基金funded by National Major Science and Technology Project on Breeding of New Genetically Modified Organisms(Grant No.2016ZX-08001003-001)。
文摘Weeds and insect pests are two important biotic stresses resulting in yield loss in rice, and wide compatibility is the essential characteristic of breeding inter-subspecific hybrid rice. This study focused on glyphosate resistance, lepidopteran resistance and wide compatibility as well as identification of molecular and some agronomic characteristics of transgenic male sterile line E1 C4008 S. The results indicated that glyphosate resistance gene Epsps^# and lepidopteran resistance gene Cry1 ca^# were transferred into japonica wide compatibility male sterile line 4008 S by Agrobacterium-mediated method, and four independent transformation events named E1 C4008 S-1, E1 C4008 S-2, E1 C4008 S-3 and E1 C4008 S-4 were obtained, in which E1 C4008 S-3 and E1 C4008 S-4 were of single copy insertion. The EPSPS protein contents of E1 C4008 S-3 and E1 C4008 S-4 in different organs were significantly different both in descending order of leaf > stem > root, and ranged from 300.58 to 1410.69 μg/g at the tillering stage. The glyphosate tolerable concentration(dosage) of E1 C4008 S-3 and E1 C4008 S-4 reached at least 16 g/L(54.42 kg/hm^2), and the seeds of E1 C4008 S-4 can germinate normally on the medium containing 1 g/L glyphosate. The CRY1 C protein contents of E1 C4008 S-3 and E1 C4008 S-4 in different organs were significantly different both in descending order of leaf > stem > root, and ranged from 0.62 to 2.43 μg/g at the tillering stage. The larvae mortalities of rice leaf rollers fed on leaves of E1 C4008 S-3 and E1 C4008 S-4 for 5 d were 95.35% and 97.77%, respectively, while the average mortalities of silkworms fed with protein extracts from leaves of E1 C4008 S-3 and E1 C4008 S-4 reached 94.55% and 83.64%, respectively. The results suggested that wide compatibility and evaluated agronomic traits of E1 C4008 S-4 were not significantly changed by insertion of the exogenous genes. Overall, a novel male sterile germplasm with glyphosate resistance, lepidopteran resistance and wide compatibility was verified to be developed in rice.
文摘IR36 has been used as an indica tester in screeningWCVs.However,artificial emasculation is not on-ly a time consuming work,but also may producefalse hybrids due to incomplete emasculation,andmay injure stigmata and ovary which will result ina decrease of spikelet fertility.We studied the possi-
文摘Rice selection 02428 and T984(Oryzasativa L.ssp.japonica)were germplasmresources with wide compatibility.Mature embryos of rice cultured on Lin-smaier and Skoog medium with 2.5 mg/l2,4-D,1.0 mg/l thiamine-HCL,3%(W/V)sucrose and 0.7%(W/V)agar,pH 5.8(LS2.5)were used for callus initiation.Cultures were
基金financially supported by the National Special Transgenic Project of China(2016ZX08012005)。
文摘The introduction of genetically modified(GM) soybean into farming systems raises great concern that transgenes from GM soybean may flow to endemic wild soybean via pollen. This may increase the weediness of transgenic soybean by increasing the fitness of hybrids under certain conditions and threaten the genetic diversity of wild soybean populations. Although pollen-mediated gene flow between GM crops and wild relatives is dependent on many factors, the sexual compatibility(SC)determined by their genetic backgrounds is the conclusive factor. The considerable genetic variation among wild soybean populations may cause compatibility differences between different wild and cultivated soybeans. Thus, an evaluation of the SC between transgenic soybean and different wild soybeans is essential for assessing the environmental consequences of cultivated soybean–wild soybean transgene flow. The podding and seed sets were assessed after artificial hybridization using transgenic glyphosate-resistant soybean as the paternal parent and 18 wild soybean populations as the maternal parents. Then, the average number of filled seeds produced in 200 flowers(AFS) was calculated for each wild soybean under natural self-pollination as well as under artificial crossing with transgenic soybean. Finally, the index of cross-SC was calculated(ICSC) as the ratio of the AFS of wild soybean artificially crossed with transgenic soybean and the AFS of naturally self-pollinated wild soybean. The results demonstrated that after self-pollination and crossing with transgenic soybean, the average podding rates of 18 wild soybean populations ranged within 96.50–99.50% and 4.92–18.03%, and the average filled seed numbers per pod varied from 1.70 to 2.69 and 0.20 to 0.48, respectively. The results showed that approximately 89% of wild soybeans displayed either medium or higher than medium SC with transgenic soybean(ICSC>1.0%). This implied the high possibility of gene flow via pollen from transgenic soybean to wild soybean.
基金financially supported by the National R&D Program of China (2017YFD0101302)the National Natural Science Foundation of China (31671717 and 31471517)+3 种基金the National Ten-thousand Talents Program, Heilongjiang Provincial Project, China (GX17B002, JC2018007 and C2018016)the Postdoctoral Fund in Heilongjiang Province, China (LBH-Z15017 and LBH-Q17015)the ‘Youth Innovation Talent’ Project of the general undergraduate universities in Heilongjiang Province, China (UNPYSCT-2016145)the ‘Academic Backbone’ Project of Northeast Agricultural University, China (17XG22)
文摘Hexanol is a major compound contributing to the off-flavors(the bean-like odor)of soybean derived soymilk.The most effective way to reduce the off-flavors of soymilk is the screening and utilization of soybean cultivars with improved hexanol content.However,no genome-wide genetic analysis for this particular trait has been conducted to date.The objective of the present study was to dissect the genetic basis of hexanol content in soybean seed through genome-wide association analysis(GWAS).A total of 105 soybean accessions were analyzed for hexanol content in a three-year experiments and genotyped by sequencing using the specific locus amplified fragment sequencing(SLAF-seq)approach.A total of 25 724 single nucleotide polymorphisms(SNPs)were obtained with minor allele frequencies(MAF)>5%.GWAS showed that 25 quantitative trait nucleotides(QTNs)were significantly associated with the hexanol concentration in soybean seed.These identified QTNs distributed on different genomic regions of the 15 chromosomes.A total of 91 genes were predicted as candidate genes underlying the seed hexanol level and six candidates were predicted possibly underlying the seed hexanol by gene based association.In this study,GWAS has been proven to be an effective way to dissect the genetic basis of the hexanol concentration in multiple genetic backgrounds.The identified beneficial alleles and candidate genes might be valuable for the improvement of marker-assisted breeding efficiency for low hexanol level and help to explore possible molecular mechanisms underlying hexanol content in soybean seed.
基金Supported by National Natural Science Foundation of China(31100460)Natural Science Foundation of Hainan Province(312026)Fundamental Research Fund for the Rubber Research Institute in Chinese Academy of Tropical Agricultural Sciences(1630022011014)
文摘The mevalonate diphosphate deearboxylase (MVD) is an essential enzyme in mevalonate (MVA) pathway that catalyzes the irreversible Mg2+ -ATP de- pendent decarboxylation of 6-carben compound mevalonate-5-diphosphate (MVAPP) into 5-carbon isopentenyl diphosphate ( IPP), the building block of sterol and isoprenoid biosynthesis. In this study, based on the published geanme sequences and ESTs, a genome-wide search was carried out for the first time to identify MVD gene family in four genome-sequenced Euphorbiaceae plants, i.e. castor bean ( Ricinus communis), physic nut ( Jatropha curcas), cassava (Manihot esculenta) and rubber tree (Hevea brasiliensis), and to analyze the gene structure and phylogenetic characteristics. According to the experimental results, 1, 1,2 and 2 MVD genes, which all contain 9 introns, were identh'ied from castor bean, physic nut, cassava and rubber tree, respectively. Homology analysis indicates that MVD genes are widely distributed in eukaryotes, some archaea and eubacteria, which suggests an early origin of this gerte family. Although MVD genes were identified in most green plants, no homologous genes were found in unicellular green algae. In most genome-sequenced plants including castor bean and physic nut, a single copy of MVD gene was found; however, in cassava and rubber tree, two copies were identified just like that in moss, maize, Arabidopsis and poplar. "In castor bean, digital expression profiling suggests that in five examined tissues, i.e. leaf, flower, II/III stage endosperm, V/VI stage endosperm and seed, RcPMK was expressed strongly in flower and II/III stage endosperm, moderately in V/VI stage endosperm and leaf, and weakly in seed.
基金supported by the U.S.National Cancer Institute(5R01CA114421)the Science and Technology Commission of the Shanghai Municipality(08411954100)
文摘Pancreatic cancer is a fatal malignancy with an increasing incidence in Shanghai, China. A genomewide association study(GWAS) and other work have shown that ABO alleles are associated with pancreatic cancer risk. We conducted a population-based case-control study involving 256 patients with pathologically confirmed pancreatic ductal adenocarcinoma(PDAC) and 548 healthy controls in Shanghai, China, to assess the relationships between GWAS-identified ABO alleles and risk of PDAC. Carriers of the C allele of rs505922 had an increased cancer risk [adjusted odds ratio(OR) = 1.42, 95% confidence interval(CI): 1.02-1.98] compared to TT carriers. The T alleles of rs495828 and rs657152 were also significantly associated with an elevated cancer risk(adjusted OR = 1.58, 95% CI: 1.17-2.14; adjusted OR = 1.51, 95% CI: 1.09-2.10). The rs630014 variant was not associated with risk. We did not find any significant gene-environment interaction with cancer risk using a multifactor dimensionality reduction(MDR) method. Haplotype analysis also showed that the haplotype CTTC was associated with an increased risk of PDAC(adjusted OR = 1.46, 95% CI: 1.12-1.91) compared with haplotype TGGT. GWAS-identified ABO variants are thus also associated with risk of PDAC in the Chinese population.
基金supported by the National Natural Science Foundation of China (31572375, NSFC-CGIAR31361140365)the Fundamental Research Funds for the Central Universities of China (2662016PY006)+2 种基金the National High Technology Research and Development Program of China (2013AA102502)the earmarked fund for China Agriculture Research System (CARS-35)the Dabeinong Group Promoted Project for Young Scholar of Huazhong Agricultural University, China (2017DBN019)
文摘Red blood cells play an essential role in the immune system.Moreover,red blood cell count(RBC) is an important clinical indicator of various diseases,including anemia,type 2 diabetes and the metabolic syndrome.Thus,it is necessary to reveal the genetic mechanism of RBC for animal disease resistance breeding.However,quite a few studies had focused on porcine RBC,especially at different stages.Thus,studies on porcine RBC at different stages are needed for disease resistant breeding.In this study,the porcine RBC of 20-,33-,and 80-day old were measured,and genetic parameter estimation and genome-wide association study(GWAS) were both performed.As a result,the heritability was about 0.6 at the early stages,much higher than that at 80 days.Nine novel genome wide significant single nucleotide polymorphisms(SNPs),located at Sus scrofa chromosome(SSC)3,4,8,9,10 and 15,respectively,were identified.Further,TGFβ2,TMCC2 and PPP1 R15 B genes were identified as important candidate genes of porcine red blood cell count.So different SNPs and candidate genes were found significantly associated with porcine RBC at different stages,suggesting that different genes might play key roles on porcine RBC at different stages.Overall,new evidences were offered in this study for the genetic bases of animal RBC,and that the SNPs and candidate genes would be useful for disease resistant breeding of pig.
文摘Since the middle of 1980’s, wide compatibility(WC) rice lines have been screened by ricebreeders in China and applied in hybrid ricebreeding program. Several WC lines such asPecos, T984, Lunhui 422, and 02428 withideal agronomic characters were identified. Weincorporated the WC gene into restorer linesby crossing these japonica WC lines with ob-tained indica lines. Some WC restorer lineswith indica-japonica medium type were ob-tained and their application value in intersub-specific hybrid rice breeding were evaluated. 1. Effect of crossing methods on selectionefficiencies of WC restorer lines
文摘玉米籽粒氮含量与品质紧密相关,其遗传机制的解析对玉米品质育种具有重要意义。本研究以252份玉米自交系为关联群体,利用贝叶斯信息与连锁不平衡迭代嵌套式模型(BLINK,bayesian-informationandlinkage-disequilibrium iteratively nested keyway)、固定随机循环概率模型(FarmCPU,fixed and random model circulating probability unification)、一般线性模型(GLM,general linear model)、混合线性模型(MLM,mixed linear model)、多位点混合线性模型(MLMM,multiple loci mixed model)和逐步排它性混合线性模型(SUPER,settlement of MLM under progressively exclusive relationship)等方法分别对其籽粒氮含量进行全基因组关联分析。共鉴定到13个与籽粒氮含量显著关联的SNP(P<3.64E-07)。BLINK、FarmCPU、GLM、MLM、MLMM和SUPER方法分别检测到6个、3个、7个、4个、2个和4个SNP位点。其中,S3_8879213在5种方法中均能检测到,S9_146173702在4种方法中均能检测到,S5_114774030和S7_182217338在3种方法中均能检测到,S1_10906326和S1_177528813在2种方法中均能检测到。共挖掘25个相关候选基因,其中Zm00001eb275080和Zm00001eb330700可能是影响玉米籽粒氮含量的重要候选基因。