On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and shor...On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and short range correlation in human Y chromosome palindromes. The magnitude distribution of the long range correlation which can be reflected by the mutual information is PS〉PSa〉PSb （P5a and P5b are the sequences that replace solely Alu repeats and all interspersed repeats with random uneorrelated sequences in human Y chromosome palindrome 5, respectively）; and the magnitude distribution of the short range correlation which can be reflected by the n-tuple entropy and the conditional entropy is PS〉P5a〉PSb〉random uncorrelated sequence. In other words, when the Alu repeats and all interspersed repeats replace with random uneorrelated sequence, the long range and short range correlation decrease gradually. However, the random nncorrelated sequence has no correlation. This research indicates that more repeat sequences result in stronger correlation between bases in human Y chromosome. The analyses may be helpful to understand the special structures of human Y chromosome palindromes profoundly.展开更多
The train schedule usually includes train stop schedule,routing scheme and formation scheme.It is the basis of subway transportation.Combining the practical experience of transport organizations and the principle of t...The train schedule usually includes train stop schedule,routing scheme and formation scheme.It is the basis of subway transportation.Combining the practical experience of transport organizations and the principle of the best match between transport capacity and passenger flow demand,taking the minimum value of passenger travel costs and corporation operating costs as the goal,considering the constraints of the maximum rail capacity,the minimum departure frequency and the maximum available electric multiple unit,an optimization model for city subway Y-type operation mode is constructed to determine the operation section of mainline as well as branch line and the train frequency of the Y-type operation mode.The particle swarm optimization(PSO)algorithm based on classification learning is used to solve the model,and the effectiveness of the model and algorithm is verified by a practical case.The results show that the length of branch line in Y-type operation affects the cost of waiting time of passengers significantly.展开更多
基金This work was supported by the National Natu- ral Science Foundation of China （No.20173023 and No.90203012） and the Specialized Research Fund for the Doctoral Program of Higher Education of China （No.20020730006）.
文摘On the basis of information theory and statistical methods, we use mutual information, n- tuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and short range correlation in human Y chromosome palindromes. The magnitude distribution of the long range correlation which can be reflected by the mutual information is PS〉PSa〉PSb （P5a and P5b are the sequences that replace solely Alu repeats and all interspersed repeats with random uneorrelated sequences in human Y chromosome palindrome 5, respectively）; and the magnitude distribution of the short range correlation which can be reflected by the n-tuple entropy and the conditional entropy is PS〉P5a〉PSb〉random uncorrelated sequence. In other words, when the Alu repeats and all interspersed repeats replace with random uneorrelated sequence, the long range and short range correlation decrease gradually. However, the random nncorrelated sequence has no correlation. This research indicates that more repeat sequences result in stronger correlation between bases in human Y chromosome. The analyses may be helpful to understand the special structures of human Y chromosome palindromes profoundly.
文摘The train schedule usually includes train stop schedule,routing scheme and formation scheme.It is the basis of subway transportation.Combining the practical experience of transport organizations and the principle of the best match between transport capacity and passenger flow demand,taking the minimum value of passenger travel costs and corporation operating costs as the goal,considering the constraints of the maximum rail capacity,the minimum departure frequency and the maximum available electric multiple unit,an optimization model for city subway Y-type operation mode is constructed to determine the operation section of mainline as well as branch line and the train frequency of the Y-type operation mode.The particle swarm optimization(PSO)algorithm based on classification learning is used to solve the model,and the effectiveness of the model and algorithm is verified by a practical case.The results show that the length of branch line in Y-type operation affects the cost of waiting time of passengers significantly.
